RNA–Protein interactions for RNA: ENST00000522008.1

CHRNA2-209, Transcript of cholinergic receptor nicotinic alpha 2 subunit, humanhuman

TSL 4

Gene CHRNA2, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA2-209ENST00000522008 NISCHQ9Y2I1 1504 aa23.53■■□□□ 1.36
CHRNA2-209ENST00000522008 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
CHRNA2-209ENST00000522008 ABCC9O60706 1549 aa19.78■□□□□ 0.76
CHRNA2-209ENST00000522008 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
CHRNA2-209ENST00000522008 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
CHRNA2-209ENST00000522008 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.72
CHRNA2-209ENST00000522008 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
CHRNA2-209ENST00000522008 NACADO15069 1562 aa19.4■□□□□ 0.7
CHRNA2-209ENST00000522008 RB1CC1Q8TDY2 1594 aa19.29■□□□□ 0.68
CHRNA2-209ENST00000522008 SCRIBQ14160 1630 aa18.86■□□□□ 0.61
CHRNA2-209ENST00000522008 UNC13AQ9UPW8 1703 aa18.8■□□□□ 0.6
CHRNA2-209ENST00000522008 SHROOM4Q9ULL8 1493 aa18.79■□□□□ 0.6
CHRNA2-209ENST00000522008 DNAJC5BQ9UF47 199 aa18.71■□□□□ 0.59
CHRNA2-209ENST00000522008 BICRAQ9NZM4 1560 aa18.63■□□□□ 0.57
CHRNA2-209ENST00000522008 PABPN1Q86U42 306 aaKnown RBP eCLIP18.59■□□□□ 0.57
CHRNA2-209ENST00000522008 CECR2Q9BXF3 1484 aa18.24■□□□□ 0.51
CHRNA2-209ENST00000522008 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
CHRNA2-209ENST00000522008 SMARCA4P51532 1647 aa18.13■□□□□ 0.49
CHRNA2-209ENST00000522008 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
CHRNA2-209ENST00000522008 MROH2BQ7Z745 1585 aa18.1■□□□□ 0.49
CHRNA2-209ENST00000522008 RSF1Q96T23 1441 aaPredicted RBP18.09■□□□□ 0.49
CHRNA2-209ENST00000522008 SUPT5HO00267 1087 aaKnown RBP17.99■□□□□ 0.47
CHRNA2-209ENST00000522008 PEG3Q9GZU2 1588 aa17.99■□□□□ 0.47
CHRNA2-209ENST00000522008 SMARCA2P51531 1590 aa17.96■□□□□ 0.46
CHRNA2-209ENST00000522008 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
CHRNA2-209ENST00000522008 CC2D2AQ9P2K1 1620 aa17.94■□□□□ 0.46
CHRNA2-209ENST00000522008 WIZO95785 1651 aa17.93■□□□□ 0.46
CHRNA2-209ENST00000522008 NCAPD3P42695 1498 aa17.9■□□□□ 0.46
CHRNA2-209ENST00000522008 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
CHRNA2-209ENST00000522008 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
CHRNA2-209ENST00000522008 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.44
CHRNA2-209ENST00000522008 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
CHRNA2-209ENST00000522008 CCDC88BA6NC98 1476 aa17.59■□□□□ 0.41
CHRNA2-209ENST00000522008 CADPSQ9ULU8 1353 aa17.41■□□□□ 0.38
CHRNA2-209ENST00000522008 CFTRP13569 1480 aa17.37■□□□□ 0.37
CHRNA2-209ENST00000522008 LAMC3Q9Y6N6 1575 aa17.35■□□□□ 0.37
CHRNA2-209ENST00000522008 PRDM2Q13029 1718 aa17.26■□□□□ 0.35
CHRNA2-209ENST00000522008 PDS5BQ9NTI5 1447 aa17.24■□□□□ 0.35
CHRNA2-209ENST00000522008 NESP48681 1621 aa17.24■□□□□ 0.35
CHRNA2-209ENST00000522008 CUX2O14529 1486 aa17.16■□□□□ 0.34
CHRNA2-209ENST00000522008 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
CHRNA2-209ENST00000522008 CEP164Q9UPV0 1460 aa17.1■□□□□ 0.33
CHRNA2-209ENST00000522008 CHIC1Q5VXU3 224 aa17.09■□□□□ 0.33
CHRNA2-209ENST00000522008 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
CHRNA2-209ENST00000522008 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
CHRNA2-209ENST00000522008 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
CHRNA2-209ENST00000522008 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
CHRNA2-209ENST00000522008 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
CHRNA2-209ENST00000522008 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
CHRNA2-209ENST00000522008 TOP2BQ02880 1626 aa16.96■□□□□ 0.3
CHRNA2-209ENST00000522008 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
CHRNA2-209ENST00000522008 BIVM-ERCC5R4GMW8 1640 aa16.94■□□□□ 0.3
CHRNA2-209ENST00000522008 CUX1P39880 1505 aa16.94■□□□□ 0.3
CHRNA2-209ENST00000522008 TOPBP1Q92547 1522 aa16.93■□□□□ 0.3
CHRNA2-209ENST00000522008 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
CHRNA2-209ENST00000522008 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
CHRNA2-209ENST00000522008 WDR62O43379 1518 aa16.9■□□□□ 0.3
CHRNA2-209ENST00000522008 THOC2Q8NI27 1593 aaKnown RBP16.88■□□□□ 0.29
CHRNA2-209ENST00000522008 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
CHRNA2-209ENST00000522008 POLA1P09884 1462 aaPredicted RBP16.81■□□□□ 0.28
CHRNA2-209ENST00000522008 SOGA1O94964 1423 aa16.8■□□□□ 0.28
CHRNA2-209ENST00000522008 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
CHRNA2-209ENST00000522008 RAD54L2Q9Y4B4 1467 aa16.73■□□□□ 0.27
CHRNA2-209ENST00000522008 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
CHRNA2-209ENST00000522008 EEA1Q15075 1411 aa16.71■□□□□ 0.27
CHRNA2-209ENST00000522008 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
CHRNA2-209ENST00000522008 KIF27Q86VH2 1401 aa16.7■□□□□ 0.26
CHRNA2-209ENST00000522008 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
CHRNA2-209ENST00000522008 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
CHRNA2-209ENST00000522008 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
CHRNA2-209ENST00000522008 RUSC2Q8N2Y8 1516 aa16.61■□□□□ 0.25
CHRNA2-209ENST00000522008 GAPVD1Q14C86 1478 aa16.6■□□□□ 0.25
CHRNA2-209ENST00000522008 FAM9AQ8IZU1 332 aaPredicted RBP16.59■□□□□ 0.25
CHRNA2-209ENST00000522008 ABCA5Q8WWZ7 1642 aa16.57■□□□□ 0.24
CHRNA2-209ENST00000522008 IGF1RP08069 1367 aa16.57■□□□□ 0.24
CHRNA2-209ENST00000522008 ZNF608Q9ULD9 1512 aaPredicted RBP16.56■□□□□ 0.24
CHRNA2-209ENST00000522008 AQRO60306 1485 aaKnown RBP eCLIP16.56■□□□□ 0.24
CHRNA2-209ENST00000522008 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
CHRNA2-209ENST00000522008 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
CHRNA2-209ENST00000522008 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
CHRNA2-209ENST00000522008 PBRM1Q86U86 1689 aa16.49■□□□□ 0.23
CHRNA2-209ENST00000522008 CARMIL1Q5VZK9 1371 aa16.48■□□□□ 0.23
CHRNA2-209ENST00000522008 CUL7Q14999 1698 aa16.47■□□□□ 0.23
CHRNA2-209ENST00000522008 PRXQ9BXM0 1461 aa16.47■□□□□ 0.23
CHRNA2-209ENST00000522008 MAGI1Q96QZ7 1491 aaPredicted RBP16.44■□□□□ 0.22
CHRNA2-209ENST00000522008 KIF21BO75037 1637 aa16.43■□□□□ 0.22
CHRNA2-209ENST00000522008 FHAD1B1AJZ9 1412 aa16.43■□□□□ 0.22
CHRNA2-209ENST00000522008 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
CHRNA2-209ENST00000522008 SNAPC4Q5SXM2 1469 aa16.4■□□□□ 0.22
CHRNA2-209ENST00000522008 GOLGA3Q08378 1498 aa16.39■□□□□ 0.21
CHRNA2-209ENST00000522008 CHMP7Q8WUX9 453 aaPredicted RBP16.38■□□□□ 0.21
CHRNA2-209ENST00000522008 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
CHRNA2-209ENST00000522008 ADAMTS12P58397 1594 aa16.37■□□□□ 0.21
CHRNA2-209ENST00000522008 LOC105371045A0A1W2PR82 267 aa16.36■□□□□ 0.21
CHRNA2-209ENST00000522008 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
CHRNA2-209ENST00000522008 FBLN2P98095 1184 aa16.32■□□□□ 0.2
CHRNA2-209ENST00000522008 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
CHRNA2-209ENST00000522008 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
CHRNA2-209ENST00000522008 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
CHRNA2-209ENST00000522008 CHD1O14646 1710 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms