RNA–Protein interactions for RNA: ENST00000521985.1

PTK2-237, Transcript of protein tyrosine kinase 2, humanhuman

TSL 3

Gene PTK2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-237ENST00000521985 NISCHQ9Y2I1 1504 aa27.38■■□□□ 1.97
PTK2-237ENST00000521985 ABCC9O60706 1549 aa24.36■■□□□ 1.49
PTK2-237ENST00000521985 CCDC180Q9P1Z9 1646 aa24.33■■□□□ 1.49
PTK2-237ENST00000521985 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
PTK2-237ENST00000521985 RB1CC1Q8TDY2 1594 aa23.18■■□□□ 1.3
PTK2-237ENST00000521985 NACADO15069 1562 aa23.09■■□□□ 1.29
PTK2-237ENST00000521985 DNAJC5BQ9UF47 199 aa22.85■■□□□ 1.25
PTK2-237ENST00000521985 MYO15BQ96JP2 1530 aa22.84■■□□□ 1.25
PTK2-237ENST00000521985 PABPN1Q86U42 306 aaKnown RBP eCLIP22.83■■□□□ 1.25
PTK2-237ENST00000521985 ZCCHC6Q5VYS8 1495 aaKnown RBP22.7■■□□□ 1.22
PTK2-237ENST00000521985 DCAF1Q9Y4B6 1507 aa22.6■■□□□ 1.21
PTK2-237ENST00000521985 BICRAQ9NZM4 1560 aa22.5■■□□□ 1.19
PTK2-237ENST00000521985 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
PTK2-237ENST00000521985 SCRIBQ14160 1630 aa22.26■■□□□ 1.15
PTK2-237ENST00000521985 SHROOM4Q9ULL8 1493 aa22.21■■□□□ 1.15
PTK2-237ENST00000521985 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.1
PTK2-237ENST00000521985 CC2D2AQ9P2K1 1620 aa21.94■■□□□ 1.1
PTK2-237ENST00000521985 CECR2Q9BXF3 1484 aa21.93■■□□□ 1.1
PTK2-237ENST00000521985 NCAPD3P42695 1498 aa21.4■■□□□ 1.02
PTK2-237ENST00000521985 ATAD2BQ9ULI0 1458 aa21.33■■□□□ 1.01
PTK2-237ENST00000521985 SMARCA4P51532 1647 aa21.25■□□□□ 0.99
PTK2-237ENST00000521985 SMARCA2P51531 1590 aa21.22■□□□□ 0.99
PTK2-237ENST00000521985 BAZ1AQ9NRL2 1556 aaPredicted RBP21.21■□□□□ 0.99
PTK2-237ENST00000521985 HMGXB3Q12766 1538 aa21.14■□□□□ 0.97
PTK2-237ENST00000521985 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
PTK2-237ENST00000521985 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
PTK2-237ENST00000521985 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
PTK2-237ENST00000521985 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
PTK2-237ENST00000521985 NESP48681 1621 aa20.97■□□□□ 0.95
PTK2-237ENST00000521985 CUX2O14529 1486 aa20.89■□□□□ 0.94
PTK2-237ENST00000521985 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
PTK2-237ENST00000521985 RSF1Q96T23 1441 aaPredicted RBP20.79■□□□□ 0.92
PTK2-237ENST00000521985 WIZO95785 1651 aa20.79■□□□□ 0.92
PTK2-237ENST00000521985 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
PTK2-237ENST00000521985 LAMC3Q9Y6N6 1575 aa20.77■□□□□ 0.92
PTK2-237ENST00000521985 PDS5BQ9NTI5 1447 aa20.76■□□□□ 0.91
PTK2-237ENST00000521985 THOC2Q8NI27 1593 aaKnown RBP20.6■□□□□ 0.89
PTK2-237ENST00000521985 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
PTK2-237ENST00000521985 CFTRP13569 1480 aa20.54■□□□□ 0.88
PTK2-237ENST00000521985 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
PTK2-237ENST00000521985 MRC2Q9UBG0 1479 aa20.52■□□□□ 0.88
PTK2-237ENST00000521985 FANCD2Q9BXW9 1451 aa20.49■□□□□ 0.87
PTK2-237ENST00000521985 CEP164Q9UPV0 1460 aa20.45■□□□□ 0.86
PTK2-237ENST00000521985 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
PTK2-237ENST00000521985 WDR62O43379 1518 aa20.42■□□□□ 0.86
PTK2-237ENST00000521985 URB2Q14146 1524 aaKnown RBP20.29■□□□□ 0.84
PTK2-237ENST00000521985 OSCARQ8IYS5 282 aa20.13■□□□□ 0.81
PTK2-237ENST00000521985 TOPBP1Q92547 1522 aa20.1■□□□□ 0.81
PTK2-237ENST00000521985 ABCC8Q09428 1581 aa20.08■□□□□ 0.81
PTK2-237ENST00000521985 SUPT5HO00267 1087 aaKnown RBP20.08■□□□□ 0.81
PTK2-237ENST00000521985 IFT140Q96RY7 1462 aa20.07■□□□□ 0.8
PTK2-237ENST00000521985 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
PTK2-237ENST00000521985 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
PTK2-237ENST00000521985 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
PTK2-237ENST00000521985 DNMBPQ6XZF7 1577 aa19.98■□□□□ 0.79
PTK2-237ENST00000521985 AQRO60306 1485 aaKnown RBP eCLIP19.92■□□□□ 0.78
PTK2-237ENST00000521985 POLA1P09884 1462 aaPredicted RBP19.91■□□□□ 0.78
PTK2-237ENST00000521985 SOGA1O94964 1423 aa19.9■□□□□ 0.78
PTK2-237ENST00000521985 RAD54L2Q9Y4B4 1467 aa19.87■□□□□ 0.77
PTK2-237ENST00000521985 TDRD9Q8NDG6 1382 aaKnown RBP19.85■□□□□ 0.77
PTK2-237ENST00000521985 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
PTK2-237ENST00000521985 FBLN2P98095 1184 aa19.81■□□□□ 0.76
PTK2-237ENST00000521985 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
PTK2-237ENST00000521985 FGD5Q6ZNL6 1462 aa19.8■□□□□ 0.76
PTK2-237ENST00000521985 CUX1P39880 1505 aa19.8■□□□□ 0.76
PTK2-237ENST00000521985 CHMP7Q8WUX9 453 aaPredicted RBP19.7■□□□□ 0.74
PTK2-237ENST00000521985 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
PTK2-237ENST00000521985 SNAPC4Q5SXM2 1469 aa19.65■□□□□ 0.74
PTK2-237ENST00000521985 CYB5RLQ6IPT4 315 aa19.64■□□□□ 0.73
PTK2-237ENST00000521985 ARHGEF11O15085 1522 aa19.64■□□□□ 0.73
PTK2-237ENST00000521985 RIMBP3CA6NJZ7 1639 aa19.63■□□□□ 0.73
PTK2-237ENST00000521985 RIMBP3BA6NNM3 1639 aa19.63■□□□□ 0.73
PTK2-237ENST00000521985 RIMBP3Q9UFD9 1639 aa19.63■□□□□ 0.73
PTK2-237ENST00000521985 WDR97A6NE52 1622 aa19.62■□□□□ 0.73
PTK2-237ENST00000521985 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
PTK2-237ENST00000521985 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
PTK2-237ENST00000521985 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
PTK2-237ENST00000521985 ABCA10Q8WWZ4 1543 aa19.59■□□□□ 0.73
PTK2-237ENST00000521985 CHD1O14646 1710 aa19.57■□□□□ 0.72
PTK2-237ENST00000521985 SYNJ2O15056 1496 aa19.55■□□□□ 0.72
PTK2-237ENST00000521985 TOP2BQ02880 1626 aa19.48■□□□□ 0.71
PTK2-237ENST00000521985 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
PTK2-237ENST00000521985 SYNJ1O43426 1573 aa19.47■□□□□ 0.71
PTK2-237ENST00000521985 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
PTK2-237ENST00000521985 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
PTK2-237ENST00000521985 BIVM-ERCC5R4GMW8 1640 aa19.43■□□□□ 0.7
PTK2-237ENST00000521985 PBRM1Q86U86 1689 aa19.39■□□□□ 0.69
PTK2-237ENST00000521985 FHAD1B1AJZ9 1412 aa19.38■□□□□ 0.69
PTK2-237ENST00000521985 GRIN2AQ12879 1464 aa19.37■□□□□ 0.69
PTK2-237ENST00000521985 TRHP20396 242 aaPredicted RBP19.36■□□□□ 0.69
PTK2-237ENST00000521985 NUP160Q12769 1436 aa19.33■□□□□ 0.68
PTK2-237ENST00000521985 ERICH3Q5RHP9 1530 aa19.32■□□□□ 0.68
PTK2-237ENST00000521985 ADAMTS12P58397 1594 aa19.3■□□□□ 0.68
PTK2-237ENST00000521985 IGF1RP08069 1367 aa19.26■□□□□ 0.67
PTK2-237ENST00000521985 CEP170Q5SW79 1584 aa19.25■□□□□ 0.67
PTK2-237ENST00000521985 JPH4Q96JJ6 628 aa19.25■□□□□ 0.67
PTK2-237ENST00000521985 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
PTK2-237ENST00000521985 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
PTK2-237ENST00000521985 PRG4Q92954 1404 aaPredicted RBP19.17■□□□□ 0.66
PTK2-237ENST00000521985 SHROOM2Q13796 1616 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms