RNA–Protein interactions for RNA: ENST00000521690.1

LAMA4-216, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-216ENST00000521690 NISCHQ9Y2I1 1504 aa38.61■■■■□ 3.77
LAMA4-216ENST00000521690 CCDC180Q9P1Z9 1646 aa34.08■■■■□ 3.05
LAMA4-216ENST00000521690 ABCC9O60706 1549 aa32.59■■■□□ 2.81
LAMA4-216ENST00000521690 ZCCHC6Q5VYS8 1495 aaKnown RBP32.31■■■□□ 2.76
LAMA4-216ENST00000521690 DCAF1Q9Y4B6 1507 aa32.04■■■□□ 2.72
LAMA4-216ENST00000521690 MYO15BQ96JP2 1530 aa31.95■■■□□ 2.7
LAMA4-216ENST00000521690 DCAF8L2P0C7V8 631 aa31.88■■■□□ 2.69
LAMA4-216ENST00000521690 NACADO15069 1562 aa31.88■■■□□ 2.69
LAMA4-216ENST00000521690 RB1CC1Q8TDY2 1594 aa31.73■■■□□ 2.67
LAMA4-216ENST00000521690 SCRIBQ14160 1630 aa31.06■■■□□ 2.56
LAMA4-216ENST00000521690 UNC13AQ9UPW8 1703 aa30.98■■■□□ 2.55
LAMA4-216ENST00000521690 SHROOM4Q9ULL8 1493 aa30.79■■■□□ 2.52
LAMA4-216ENST00000521690 BICRAQ9NZM4 1560 aa30.71■■■□□ 2.51
LAMA4-216ENST00000521690 PABPN1Q86U42 306 aaKnown RBP eCLIP30.54■■■□□ 2.48
LAMA4-216ENST00000521690 CECR2Q9BXF3 1484 aa29.94■■■□□ 2.38
LAMA4-216ENST00000521690 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
LAMA4-216ENST00000521690 EIF4G1Q04637 1599 aaKnown RBP29.86■■■□□ 2.37
LAMA4-216ENST00000521690 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
LAMA4-216ENST00000521690 MROH2BQ7Z745 1585 aa29.73■■■□□ 2.35
LAMA4-216ENST00000521690 RSF1Q96T23 1441 aaPredicted RBP29.64■■■□□ 2.34
LAMA4-216ENST00000521690 PEG3Q9GZU2 1588 aa29.56■■■□□ 2.32
LAMA4-216ENST00000521690 CC2D2AQ9P2K1 1620 aa29.55■■■□□ 2.32
LAMA4-216ENST00000521690 SMARCA2P51531 1590 aa29.52■■■□□ 2.32
LAMA4-216ENST00000521690 ATAD2BQ9ULI0 1458 aa29.48■■■□□ 2.31
LAMA4-216ENST00000521690 WIZO95785 1651 aa29.44■■■□□ 2.3
LAMA4-216ENST00000521690 NCAPD3P42695 1498 aa29.39■■■□□ 2.3
LAMA4-216ENST00000521690 SUPT5HO00267 1087 aaKnown RBP29.33■■■□□ 2.29
LAMA4-216ENST00000521690 HMGXB3Q12766 1538 aa29.32■■■□□ 2.28
LAMA4-216ENST00000521690 BAZ1BQ9UIG0 1483 aaKnown RBP29.28■■■□□ 2.28
LAMA4-216ENST00000521690 DNAJC5BQ9UF47 199 aa29.27■■■□□ 2.28
LAMA4-216ENST00000521690 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
LAMA4-216ENST00000521690 CCDC88BA6NC98 1476 aa28.84■■■□□ 2.21
LAMA4-216ENST00000521690 CADPSQ9ULU8 1353 aa28.54■■■□□ 2.16
LAMA4-216ENST00000521690 CFTRP13569 1480 aa28.53■■■□□ 2.16
LAMA4-216ENST00000521690 LAMC3Q9Y6N6 1575 aa28.52■■■□□ 2.16
LAMA4-216ENST00000521690 PRDM2Q13029 1718 aa28.4■■■□□ 2.14
LAMA4-216ENST00000521690 NESP48681 1621 aa28.4■■■□□ 2.14
LAMA4-216ENST00000521690 PDS5BQ9NTI5 1447 aa28.28■■■□□ 2.12
LAMA4-216ENST00000521690 FANCD2Q9BXW9 1451 aa28.21■■■□□ 2.11
LAMA4-216ENST00000521690 CEP164Q9UPV0 1460 aa28.12■■■□□ 2.09
LAMA4-216ENST00000521690 KIF21AQ7Z4S6 1674 aa28.12■■■□□ 2.09
LAMA4-216ENST00000521690 ERCC6Q03468 1493 aa28.07■■■□□ 2.08
LAMA4-216ENST00000521690 ABCC8Q09428 1581 aa27.96■■■□□ 2.07
LAMA4-216ENST00000521690 WRNQ14191 1432 aaPredicted RBP eCLIP27.94■■■□□ 2.06
LAMA4-216ENST00000521690 MRC2Q9UBG0 1479 aa27.94■■■□□ 2.06
LAMA4-216ENST00000521690 DNMBPQ6XZF7 1577 aa27.88■■■□□ 2.05
LAMA4-216ENST00000521690 THOC2Q8NI27 1593 aaKnown RBP27.87■■■□□ 2.05
LAMA4-216ENST00000521690 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
LAMA4-216ENST00000521690 CUX1P39880 1505 aa27.86■■■□□ 2.05
LAMA4-216ENST00000521690 WDR62O43379 1518 aa27.84■■■□□ 2.05
LAMA4-216ENST00000521690 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
LAMA4-216ENST00000521690 TOPBP1Q92547 1522 aa27.83■■■□□ 2.05
LAMA4-216ENST00000521690 BIVM-ERCC5R4GMW8 1640 aa27.83■■■□□ 2.05
LAMA4-216ENST00000521690 SYNJ1O43426 1573 aa27.82■■■□□ 2.04
LAMA4-216ENST00000521690 CHIC1Q5VXU3 224 aa27.8■■■□□ 2.04
LAMA4-216ENST00000521690 TRIM41Q8WV44 630 aa27.73■■■□□ 2.03
LAMA4-216ENST00000521690 FGD5Q6ZNL6 1462 aa27.67■■■□□ 2.02
LAMA4-216ENST00000521690 POLA1P09884 1462 aaPredicted RBP27.64■■■□□ 2.01
LAMA4-216ENST00000521690 CUX2O14529 1486 aa27.57■■■□□ 2
LAMA4-216ENST00000521690 SOGA1O94964 1423 aa27.54■■■□□ 2
LAMA4-216ENST00000521690 IFT140Q96RY7 1462 aa27.51■■■□□ 2
LAMA4-216ENST00000521690 TARBP1Q13395 1621 aaKnown RBP27.49■■□□□ 1.99
LAMA4-216ENST00000521690 RAD54L2Q9Y4B4 1467 aa27.47■■□□□ 1.99
LAMA4-216ENST00000521690 ABCA10Q8WWZ4 1543 aa27.46■■□□□ 1.99
LAMA4-216ENST00000521690 WDR97A6NE52 1622 aa27.44■■□□□ 1.98
LAMA4-216ENST00000521690 KIF27Q86VH2 1401 aa27.33■■□□□ 1.97
LAMA4-216ENST00000521690 EEA1Q15075 1411 aa27.3■■□□□ 1.96
LAMA4-216ENST00000521690 ABCA5Q8WWZ7 1642 aa27.3■■□□□ 1.96
LAMA4-216ENST00000521690 ZNF608Q9ULD9 1512 aaPredicted RBP27.27■■□□□ 1.96
LAMA4-216ENST00000521690 TDRD9Q8NDG6 1382 aaKnown RBP27.26■■□□□ 1.95
LAMA4-216ENST00000521690 EIF4G3O43432 1585 aaKnown RBP27.24■■□□□ 1.95
LAMA4-216ENST00000521690 GAPVD1Q14C86 1478 aa27.24■■□□□ 1.95
LAMA4-216ENST00000521690 RUSC2Q8N2Y8 1516 aa27.21■■□□□ 1.95
LAMA4-216ENST00000521690 AQRO60306 1485 aaKnown RBP eCLIP27.2■■□□□ 1.95
LAMA4-216ENST00000521690 ERICH3Q5RHP9 1530 aa27.16■■□□□ 1.94
LAMA4-216ENST00000521690 GRIN2BQ13224 1484 aa27.16■■□□□ 1.94
LAMA4-216ENST00000521690 PBRM1Q86U86 1689 aa27.14■■□□□ 1.94
LAMA4-216ENST00000521690 IGF1RP08069 1367 aa27.1■■□□□ 1.93
LAMA4-216ENST00000521690 CSRNP3Q8WYN3 585 aa27.09■■□□□ 1.93
LAMA4-216ENST00000521690 FAM9AQ8IZU1 332 aaPredicted RBP27.06■■□□□ 1.92
LAMA4-216ENST00000521690 CUL7Q14999 1698 aa27.05■■□□□ 1.92
LAMA4-216ENST00000521690 MAGI1Q96QZ7 1491 aaPredicted RBP27.04■■□□□ 1.92
LAMA4-216ENST00000521690 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
LAMA4-216ENST00000521690 PRXQ9BXM0 1461 aa26.97■■□□□ 1.91
LAMA4-216ENST00000521690 ADAMTS12P58397 1594 aa26.97■■□□□ 1.91
LAMA4-216ENST00000521690 CARMIL1Q5VZK9 1371 aa26.97■■□□□ 1.91
LAMA4-216ENST00000521690 FHAD1B1AJZ9 1412 aa26.96■■□□□ 1.91
LAMA4-216ENST00000521690 KIF21BO75037 1637 aa26.94■■□□□ 1.9
LAMA4-216ENST00000521690 SYNJ2O15056 1496 aa26.91■■□□□ 1.9
LAMA4-216ENST00000521690 RAPGEF2Q9Y4G8 1499 aa26.9■■□□□ 1.9
LAMA4-216ENST00000521690 GOLGA3Q08378 1498 aa26.81■■□□□ 1.88
LAMA4-216ENST00000521690 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
LAMA4-216ENST00000521690 CHMP7Q8WUX9 453 aaPredicted RBP26.8■■□□□ 1.88
LAMA4-216ENST00000521690 CHD1O14646 1710 aa26.76■■□□□ 1.87
LAMA4-216ENST00000521690 FBLN2P98095 1184 aa26.73■■□□□ 1.87
LAMA4-216ENST00000521690 NUP160Q12769 1436 aa26.66■■□□□ 1.86
LAMA4-216ENST00000521690 UBTFP17480 764 aaKnown RBP26.63■■□□□ 1.85
LAMA4-216ENST00000521690 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
LAMA4-216ENST00000521690 LOC105371045A0A1W2PR82 267 aa26.62■■□□□ 1.85
LAMA4-216ENST00000521690 CTTNBP2Q8WZ74 1663 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms