RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 NISCHQ9Y2I1 1504 aa29.23■■■□□ 2.27
IGHV3-60-201ENST00000521678 ABCC9O60706 1549 aa26.51■■□□□ 1.83
IGHV3-60-201ENST00000521678 CCDC180Q9P1Z9 1646 aa26.22■■□□□ 1.79
IGHV3-60-201ENST00000521678 DNAJC5BQ9UF47 199 aa25.24■■□□□ 1.63
IGHV3-60-201ENST00000521678 RB1CC1Q8TDY2 1594 aa25.11■■□□□ 1.61
IGHV3-60-201ENST00000521678 NACADO15069 1562 aa24.93■■□□□ 1.58
IGHV3-60-201ENST00000521678 DCAF8L2P0C7V8 631 aa24.77■■□□□ 1.56
IGHV3-60-201ENST00000521678 PABPN1Q86U42 306 aaKnown RBP eCLIP24.71■■□□□ 1.55
IGHV3-60-201ENST00000521678 MYO15BQ96JP2 1530 aa24.58■■□□□ 1.53
IGHV3-60-201ENST00000521678 BICRAQ9NZM4 1560 aa24.44■■□□□ 1.5
IGHV3-60-201ENST00000521678 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
IGHV3-60-201ENST00000521678 DCAF1Q9Y4B6 1507 aa24.16■■□□□ 1.46
IGHV3-60-201ENST00000521678 ZCCHC6Q5VYS8 1495 aaKnown RBP24.14■■□□□ 1.46
IGHV3-60-201ENST00000521678 SHROOM4Q9ULL8 1493 aa24.1■■□□□ 1.45
IGHV3-60-201ENST00000521678 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
IGHV3-60-201ENST00000521678 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
IGHV3-60-201ENST00000521678 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
IGHV3-60-201ENST00000521678 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
IGHV3-60-201ENST00000521678 DNAJC5Q9H3Z4 198 aa23.35■■□□□ 1.33
IGHV3-60-201ENST00000521678 NCAPD3P42695 1498 aa23.1■■□□□ 1.29
IGHV3-60-201ENST00000521678 CUX2O14529 1486 aa22.98■■□□□ 1.27
IGHV3-60-201ENST00000521678 ATAD2BQ9ULI0 1458 aa22.95■■□□□ 1.26
IGHV3-60-201ENST00000521678 ERCC6Q03468 1493 aa22.87■■□□□ 1.25
IGHV3-60-201ENST00000521678 SMARCA2P51531 1590 aa22.82■■□□□ 1.24
IGHV3-60-201ENST00000521678 HMGXB3Q12766 1538 aa22.81■■□□□ 1.24
IGHV3-60-201ENST00000521678 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
IGHV3-60-201ENST00000521678 NESP48681 1621 aa22.71■■□□□ 1.23
IGHV3-60-201ENST00000521678 BAZ1AQ9NRL2 1556 aaPredicted RBP22.66■■□□□ 1.22
IGHV3-60-201ENST00000521678 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
IGHV3-60-201ENST00000521678 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
IGHV3-60-201ENST00000521678 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
IGHV3-60-201ENST00000521678 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
IGHV3-60-201ENST00000521678 THOC2Q8NI27 1593 aaKnown RBP22.47■■□□□ 1.19
IGHV3-60-201ENST00000521678 PDS5BQ9NTI5 1447 aa22.45■■□□□ 1.18
IGHV3-60-201ENST00000521678 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
IGHV3-60-201ENST00000521678 KIF21AQ7Z4S6 1674 aa22.3■■□□□ 1.16
IGHV3-60-201ENST00000521678 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
IGHV3-60-201ENST00000521678 WDR62O43379 1518 aa22.16■■□□□ 1.14
IGHV3-60-201ENST00000521678 WIZO95785 1651 aa22.14■■□□□ 1.14
IGHV3-60-201ENST00000521678 TRIM41Q8WV44 630 aa22.09■■□□□ 1.13
IGHV3-60-201ENST00000521678 CEP164Q9UPV0 1460 aa22.06■■□□□ 1.12
IGHV3-60-201ENST00000521678 CFTRP13569 1480 aa22.05■■□□□ 1.12
IGHV3-60-201ENST00000521678 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
IGHV3-60-201ENST00000521678 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
IGHV3-60-201ENST00000521678 OSCARQ8IYS5 282 aa21.97■■□□□ 1.11
IGHV3-60-201ENST00000521678 URB2Q14146 1524 aaKnown RBP21.9■■□□□ 1.1
IGHV3-60-201ENST00000521678 TOP2AP11388 1531 aaKnown RBP21.88■■□□□ 1.09
IGHV3-60-201ENST00000521678 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
IGHV3-60-201ENST00000521678 IFT140Q96RY7 1462 aa21.67■■□□□ 1.06
IGHV3-60-201ENST00000521678 ZNF608Q9ULD9 1512 aaPredicted RBP21.66■■□□□ 1.06
IGHV3-60-201ENST00000521678 TOPBP1Q92547 1522 aa21.61■■□□□ 1.05
IGHV3-60-201ENST00000521678 ABCC8Q09428 1581 aa21.58■■□□□ 1.05
IGHV3-60-201ENST00000521678 PRDM2Q13029 1718 aa21.58■■□□□ 1.04
IGHV3-60-201ENST00000521678 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
IGHV3-60-201ENST00000521678 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
IGHV3-60-201ENST00000521678 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
IGHV3-60-201ENST00000521678 ARHGEF11O15085 1522 aa21.5■■□□□ 1.03
IGHV3-60-201ENST00000521678 DNMBPQ6XZF7 1577 aa21.47■■□□□ 1.03
IGHV3-60-201ENST00000521678 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.03
IGHV3-60-201ENST00000521678 CYB5RLQ6IPT4 315 aa21.44■■□□□ 1.02
IGHV3-60-201ENST00000521678 EIF4G3O43432 1585 aaKnown RBP21.43■■□□□ 1.02
IGHV3-60-201ENST00000521678 TARBP1Q13395 1621 aaKnown RBP21.42■■□□□ 1.02
IGHV3-60-201ENST00000521678 POLA1P09884 1462 aaPredicted RBP21.38■■□□□ 1.01
IGHV3-60-201ENST00000521678 FBLN2P98095 1184 aa21.34■■□□□ 1.01
IGHV3-60-201ENST00000521678 SOGA1O94964 1423 aa21.31■■□□□ 1
IGHV3-60-201ENST00000521678 RAD54L2Q9Y4B4 1467 aa21.31■■□□□ 1
IGHV3-60-201ENST00000521678 TDRD9Q8NDG6 1382 aaKnown RBP21.3■■□□□ 1
IGHV3-60-201ENST00000521678 ARAP1Q96P48 1450 aa21.29■■□□□ 1
IGHV3-60-201ENST00000521678 CHD1O14646 1710 aa21.26■□□□□ 0.99
IGHV3-60-201ENST00000521678 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
IGHV3-60-201ENST00000521678 FGD5Q6ZNL6 1462 aa21.19■□□□□ 0.98
IGHV3-60-201ENST00000521678 CHMP7Q8WUX9 453 aaPredicted RBP21.18■□□□□ 0.98
IGHV3-60-201ENST00000521678 SNAPC4Q5SXM2 1469 aa21.17■□□□□ 0.98
IGHV3-60-201ENST00000521678 WDR97A6NE52 1622 aa21.16■□□□□ 0.98
IGHV3-60-201ENST00000521678 CUX1P39880 1505 aa21.14■□□□□ 0.98
IGHV3-60-201ENST00000521678 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.98
IGHV3-60-201ENST00000521678 MAGI1Q96QZ7 1491 aaPredicted RBP21.14■□□□□ 0.98
IGHV3-60-201ENST00000521678 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
IGHV3-60-201ENST00000521678 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
IGHV3-60-201ENST00000521678 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
IGHV3-60-201ENST00000521678 GAPVD1Q14C86 1478 aa21.02■□□□□ 0.96
IGHV3-60-201ENST00000521678 ABCA10Q8WWZ4 1543 aa20.97■□□□□ 0.95
IGHV3-60-201ENST00000521678 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.93
IGHV3-60-201ENST00000521678 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
IGHV3-60-201ENST00000521678 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
IGHV3-60-201ENST00000521678 GRIN2AQ12879 1464 aa20.84■□□□□ 0.93
IGHV3-60-201ENST00000521678 NUP160Q12769 1436 aa20.82■□□□□ 0.92
IGHV3-60-201ENST00000521678 SUPT5HO00267 1087 aaKnown RBP20.81■□□□□ 0.92
IGHV3-60-201ENST00000521678 ERCC6L2Q5T890 1561 aa20.78■□□□□ 0.92
IGHV3-60-201ENST00000521678 FHAD1B1AJZ9 1412 aa20.77■□□□□ 0.91
IGHV3-60-201ENST00000521678 AEBP2Q6ZN18 517 aaPredicted RBP20.76■□□□□ 0.91
IGHV3-60-201ENST00000521678 ADAMTS12P58397 1594 aa20.73■□□□□ 0.91
IGHV3-60-201ENST00000521678 CEP170Q5SW79 1584 aa20.73■□□□□ 0.91
IGHV3-60-201ENST00000521678 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
IGHV3-60-201ENST00000521678 ERICH3Q5RHP9 1530 aa20.68■□□□□ 0.9
IGHV3-60-201ENST00000521678 SHROOM2Q13796 1616 aa20.68■□□□□ 0.9
IGHV3-60-201ENST00000521678 BIVM-ERCC5R4GMW8 1640 aa20.68■□□□□ 0.9
IGHV3-60-201ENST00000521678 JPH4Q96JJ6 628 aa20.67■□□□□ 0.9
IGHV3-60-201ENST00000521678 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
IGHV3-60-201ENST00000521678 FAM69CQ0P6D2 419 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms