RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-205ENST00000521589 NISCHQ9Y2I1 1504 aa21.87■■□□□ 1.09
NPIPB3-205ENST00000521589 CCDC180Q9P1Z9 1646 aa19.57■□□□□ 0.72
NPIPB3-205ENST00000521589 ABCC9O60706 1549 aa19.35■□□□□ 0.69
NPIPB3-205ENST00000521589 RB1CC1Q8TDY2 1594 aa18.53■□□□□ 0.56
NPIPB3-205ENST00000521589 NACADO15069 1562 aa18.47■□□□□ 0.55
NPIPB3-205ENST00000521589 MYO15BQ96JP2 1530 aa18.33■□□□□ 0.52
NPIPB3-205ENST00000521589 DCAF8L2P0C7V8 631 aa18.26■□□□□ 0.51
NPIPB3-205ENST00000521589 ZCCHC6Q5VYS8 1495 aaKnown RBP18.18■□□□□ 0.5
NPIPB3-205ENST00000521589 DCAF1Q9Y4B6 1507 aa18.13■□□□□ 0.49
NPIPB3-205ENST00000521589 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
NPIPB3-205ENST00000521589 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
NPIPB3-205ENST00000521589 PABPN1Q86U42 306 aaKnown RBP eCLIP18.01■□□□□ 0.47
NPIPB3-205ENST00000521589 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
NPIPB3-205ENST00000521589 SHROOM4Q9ULL8 1493 aa17.84■□□□□ 0.45
NPIPB3-205ENST00000521589 SCRIBQ14160 1630 aa17.78■□□□□ 0.44
NPIPB3-205ENST00000521589 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
NPIPB3-205ENST00000521589 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
NPIPB3-205ENST00000521589 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
NPIPB3-205ENST00000521589 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
NPIPB3-205ENST00000521589 SMARCA4P51532 1647 aa17.02■□□□□ 0.31
NPIPB3-205ENST00000521589 ATAD2BQ9ULI0 1458 aa17.01■□□□□ 0.31
NPIPB3-205ENST00000521589 SMARCA2P51531 1590 aa16.97■□□□□ 0.31
NPIPB3-205ENST00000521589 BAZ1AQ9NRL2 1556 aaPredicted RBP16.97■□□□□ 0.31
NPIPB3-205ENST00000521589 HMGXB3Q12766 1538 aa16.95■□□□□ 0.3
NPIPB3-205ENST00000521589 PEG3Q9GZU2 1588 aa16.9■□□□□ 0.3
NPIPB3-205ENST00000521589 MROH2BQ7Z745 1585 aa16.84■□□□□ 0.29
NPIPB3-205ENST00000521589 BAZ1BQ9UIG0 1483 aaKnown RBP16.83■□□□□ 0.28
NPIPB3-205ENST00000521589 ERCC6Q03468 1493 aa16.69■□□□□ 0.26
NPIPB3-205ENST00000521589 CUX2O14529 1486 aa16.67■□□□□ 0.26
NPIPB3-205ENST00000521589 NESP48681 1621 aa16.67■□□□□ 0.26
NPIPB3-205ENST00000521589 LAMC3Q9Y6N6 1575 aa16.63■□□□□ 0.25
NPIPB3-205ENST00000521589 WIZO95785 1651 aa16.61■□□□□ 0.25
NPIPB3-205ENST00000521589 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
NPIPB3-205ENST00000521589 CADPSQ9ULU8 1353 aa16.53■□□□□ 0.24
NPIPB3-205ENST00000521589 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
NPIPB3-205ENST00000521589 THOC2Q8NI27 1593 aaKnown RBP16.51■□□□□ 0.23
NPIPB3-205ENST00000521589 TOP2AP11388 1531 aaKnown RBP16.45■□□□□ 0.22
NPIPB3-205ENST00000521589 DNAJC5Q9H3Z4 198 aa16.45■□□□□ 0.22
NPIPB3-205ENST00000521589 KIF21AQ7Z4S6 1674 aa16.44■□□□□ 0.22
NPIPB3-205ENST00000521589 CFTRP13569 1480 aa16.39■□□□□ 0.21
NPIPB3-205ENST00000521589 MRC2Q9UBG0 1479 aa16.36■□□□□ 0.21
NPIPB3-205ENST00000521589 WDR62O43379 1518 aa16.34■□□□□ 0.21
NPIPB3-205ENST00000521589 FANCD2Q9BXW9 1451 aa16.32■□□□□ 0.2
NPIPB3-205ENST00000521589 CEP164Q9UPV0 1460 aa16.32■□□□□ 0.2
NPIPB3-205ENST00000521589 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
NPIPB3-205ENST00000521589 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
NPIPB3-205ENST00000521589 URB2Q14146 1524 aaKnown RBP16.18■□□□□ 0.18
NPIPB3-205ENST00000521589 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
NPIPB3-205ENST00000521589 ABCC8Q09428 1581 aa16.03■□□□□ 0.16
NPIPB3-205ENST00000521589 IFT140Q96RY7 1462 aa16■□□□□ 0.15
NPIPB3-205ENST00000521589 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
NPIPB3-205ENST00000521589 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
NPIPB3-205ENST00000521589 OSCARQ8IYS5 282 aa15.89■□□□□ 0.13
NPIPB3-205ENST00000521589 POLA1P09884 1462 aaPredicted RBP15.89■□□□□ 0.13
NPIPB3-205ENST00000521589 TARBP1Q13395 1621 aaKnown RBP15.88■□□□□ 0.13
NPIPB3-205ENST00000521589 EIF4G3O43432 1585 aaKnown RBP15.86■□□□□ 0.13
NPIPB3-205ENST00000521589 SUPT5HO00267 1087 aaKnown RBP15.84■□□□□ 0.13
NPIPB3-205ENST00000521589 CUX1P39880 1505 aa15.82■□□□□ 0.12
NPIPB3-205ENST00000521589 AQRO60306 1485 aaKnown RBP eCLIP15.8■□□□□ 0.12
NPIPB3-205ENST00000521589 SOGA1O94964 1423 aa15.8■□□□□ 0.12
NPIPB3-205ENST00000521589 FGD5Q6ZNL6 1462 aa15.79■□□□□ 0.12
NPIPB3-205ENST00000521589 RAD54L2Q9Y4B4 1467 aa15.79■□□□□ 0.12
NPIPB3-205ENST00000521589 WDR97A6NE52 1622 aa15.77■□□□□ 0.12
NPIPB3-205ENST00000521589 TDRD9Q8NDG6 1382 aaKnown RBP15.73■□□□□ 0.11
NPIPB3-205ENST00000521589 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
NPIPB3-205ENST00000521589 CHD1O14646 1710 aa15.68■□□□□ 0.1
NPIPB3-205ENST00000521589 GRIN2BQ13224 1484 aa15.66■□□□□ 0.1
NPIPB3-205ENST00000521589 SNAPC4Q5SXM2 1469 aa15.66■□□□□ 0.1
NPIPB3-205ENST00000521589 MAGI1Q96QZ7 1491 aaPredicted RBP15.66■□□□□ 0.1
NPIPB3-205ENST00000521589 RIMBP3CA6NJZ7 1639 aa15.66■□□□□ 0.1
NPIPB3-205ENST00000521589 RIMBP3BA6NNM3 1639 aa15.66■□□□□ 0.1
NPIPB3-205ENST00000521589 RIMBP3Q9UFD9 1639 aa15.66■□□□□ 0.1
NPIPB3-205ENST00000521589 ABCA10Q8WWZ4 1543 aa15.66■□□□□ 0.1
NPIPB3-205ENST00000521589 ARHGEF11O15085 1522 aa15.65■□□□□ 0.1
NPIPB3-205ENST00000521589 GAPVD1Q14C86 1478 aa15.62■□□□□ 0.09
NPIPB3-205ENST00000521589 TOP2BQ02880 1626 aa15.61■□□□□ 0.09
NPIPB3-205ENST00000521589 WRNQ14191 1432 aaPredicted RBP eCLIP15.61■□□□□ 0.09
NPIPB3-205ENST00000521589 FBLN2P98095 1184 aa15.61■□□□□ 0.09
NPIPB3-205ENST00000521589 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
NPIPB3-205ENST00000521589 BIVM-ERCC5R4GMW8 1640 aa15.61■□□□□ 0.09
NPIPB3-205ENST00000521589 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
NPIPB3-205ENST00000521589 SYNJ1O43426 1573 aa15.58■□□□□ 0.08
NPIPB3-205ENST00000521589 CLASP1Q7Z460 1538 aa15.57■□□□□ 0.08
NPIPB3-205ENST00000521589 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
NPIPB3-205ENST00000521589 CHMP7Q8WUX9 453 aaPredicted RBP15.56■□□□□ 0.08
NPIPB3-205ENST00000521589 ARAP1Q96P48 1450 aa15.52■□□□□ 0.07
NPIPB3-205ENST00000521589 ADAMTS12P58397 1594 aa15.48■□□□□ 0.07
NPIPB3-205ENST00000521589 CYB5RLQ6IPT4 315 aa15.47■□□□□ 0.07
NPIPB3-205ENST00000521589 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
NPIPB3-205ENST00000521589 GRIN2AQ12879 1464 aa15.46■□□□□ 0.06
NPIPB3-205ENST00000521589 FHAD1B1AJZ9 1412 aa15.44■□□□□ 0.06
NPIPB3-205ENST00000521589 NUP160Q12769 1436 aa15.43■□□□□ 0.06
NPIPB3-205ENST00000521589 CEP170Q5SW79 1584 aa15.38■□□□□ 0.05
NPIPB3-205ENST00000521589 SHROOM2Q13796 1616 aa15.33■□□□□ 0.04
NPIPB3-205ENST00000521589 KIF27Q86VH2 1401 aa15.31■□□□□ 0.04
NPIPB3-205ENST00000521589 ERCC6L2Q5T890 1561 aa15.3■□□□□ 0.04
NPIPB3-205ENST00000521589 IGF1RP08069 1367 aa15.29■□□□□ 0.04
NPIPB3-205ENST00000521589 RUSC2Q8N2Y8 1516 aa15.25■□□□□ 0.03
NPIPB3-205ENST00000521589 CUL7Q14999 1698 aa15.25■□□□□ 0.03
NPIPB3-205ENST00000521589 JPH4Q96JJ6 628 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms