RNA–Protein interactions for RNA: ENST00000521477.5

DENND3-216, Transcript of DENN domain containing 3, humanhuman

TSL 3

Gene DENND3, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-216ENST00000521477 NISCHQ9Y2I1 1504 aa28.69■■■□□ 2.18
DENND3-216ENST00000521477 CCDC180Q9P1Z9 1646 aa25.58■■□□□ 1.69
DENND3-216ENST00000521477 ABCC9O60706 1549 aa24.66■■□□□ 1.54
DENND3-216ENST00000521477 NACADO15069 1562 aa23.99■■□□□ 1.43
DENND3-216ENST00000521477 MYO15BQ96JP2 1530 aa23.99■■□□□ 1.43
DENND3-216ENST00000521477 RB1CC1Q8TDY2 1594 aa23.97■■□□□ 1.43
DENND3-216ENST00000521477 ZCCHC6Q5VYS8 1495 aaKnown RBP23.95■■□□□ 1.42
DENND3-216ENST00000521477 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.41
DENND3-216ENST00000521477 DCAF8L2P0C7V8 631 aa23.69■■□□□ 1.38
DENND3-216ENST00000521477 UNC13AQ9UPW8 1703 aa23.31■■□□□ 1.32
DENND3-216ENST00000521477 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
DENND3-216ENST00000521477 SCRIBQ14160 1630 aa23.15■■□□□ 1.3
DENND3-216ENST00000521477 BICRAQ9NZM4 1560 aa23.13■■□□□ 1.29
DENND3-216ENST00000521477 PABPN1Q86U42 306 aaKnown RBP eCLIP22.98■■□□□ 1.27
DENND3-216ENST00000521477 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
DENND3-216ENST00000521477 DNAJC5BQ9UF47 199 aa22.4■■□□□ 1.18
DENND3-216ENST00000521477 CC2D2AQ9P2K1 1620 aa22.39■■□□□ 1.17
DENND3-216ENST00000521477 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
DENND3-216ENST00000521477 SMARCA4P51532 1647 aa22.24■■□□□ 1.15
DENND3-216ENST00000521477 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
DENND3-216ENST00000521477 SMARCA2P51531 1590 aa22.15■■□□□ 1.14
DENND3-216ENST00000521477 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
DENND3-216ENST00000521477 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
DENND3-216ENST00000521477 ATAD2BQ9ULI0 1458 aa22.07■■□□□ 1.12
DENND3-216ENST00000521477 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
DENND3-216ENST00000521477 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
DENND3-216ENST00000521477 BAZ1BQ9UIG0 1483 aaKnown RBP21.91■■□□□ 1.1
DENND3-216ENST00000521477 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
DENND3-216ENST00000521477 WIZO95785 1651 aa21.79■■□□□ 1.08
DENND3-216ENST00000521477 TOP2AP11388 1531 aaKnown RBP21.69■■□□□ 1.06
DENND3-216ENST00000521477 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
DENND3-216ENST00000521477 CADPSQ9ULU8 1353 aa21.42■■□□□ 1.02
DENND3-216ENST00000521477 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
DENND3-216ENST00000521477 ERCC6Q03468 1493 aa21.34■■□□□ 1.01
DENND3-216ENST00000521477 NESP48681 1621 aa21.34■■□□□ 1.01
DENND3-216ENST00000521477 CCDC88BA6NC98 1476 aa21.33■■□□□ 1.01
DENND3-216ENST00000521477 CFTRP13569 1480 aa21.33■■□□□ 1.01
DENND3-216ENST00000521477 PRDM2Q13029 1718 aa21.25■□□□□ 0.99
DENND3-216ENST00000521477 SUPT5HO00267 1087 aaKnown RBP21.23■□□□□ 0.99
DENND3-216ENST00000521477 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
DENND3-216ENST00000521477 CUX2O14529 1486 aa21.18■□□□□ 0.98
DENND3-216ENST00000521477 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
DENND3-216ENST00000521477 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
DENND3-216ENST00000521477 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.97
DENND3-216ENST00000521477 MRC2Q9UBG0 1479 aa21.1■□□□□ 0.97
DENND3-216ENST00000521477 WDR62O43379 1518 aa21.04■□□□□ 0.96
DENND3-216ENST00000521477 ABCC8Q09428 1581 aa20.98■□□□□ 0.95
DENND3-216ENST00000521477 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.94
DENND3-216ENST00000521477 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
DENND3-216ENST00000521477 TOPBP1Q92547 1522 aa20.83■□□□□ 0.93
DENND3-216ENST00000521477 IFT140Q96RY7 1462 aa20.74■□□□□ 0.91
DENND3-216ENST00000521477 CUX1P39880 1505 aa20.68■□□□□ 0.9
DENND3-216ENST00000521477 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
DENND3-216ENST00000521477 WDR97A6NE52 1622 aa20.64■□□□□ 0.9
DENND3-216ENST00000521477 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
DENND3-216ENST00000521477 BIVM-ERCC5R4GMW8 1640 aa20.62■□□□□ 0.89
DENND3-216ENST00000521477 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
DENND3-216ENST00000521477 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
DENND3-216ENST00000521477 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
DENND3-216ENST00000521477 SOGA1O94964 1423 aa20.56■□□□□ 0.88
DENND3-216ENST00000521477 SYNJ1O43426 1573 aa20.52■□□□□ 0.88
DENND3-216ENST00000521477 EIF4G3O43432 1585 aaKnown RBP20.5■□□□□ 0.87
DENND3-216ENST00000521477 ABCA10Q8WWZ4 1543 aa20.49■□□□□ 0.87
DENND3-216ENST00000521477 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
DENND3-216ENST00000521477 RAD54L2Q9Y4B4 1467 aa20.47■□□□□ 0.87
DENND3-216ENST00000521477 ABCA5Q8WWZ7 1642 aa20.38■□□□□ 0.85
DENND3-216ENST00000521477 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.85
DENND3-216ENST00000521477 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
DENND3-216ENST00000521477 TDRD9Q8NDG6 1382 aaKnown RBP20.35■□□□□ 0.85
DENND3-216ENST00000521477 GAPVD1Q14C86 1478 aa20.35■□□□□ 0.85
DENND3-216ENST00000521477 MAGI1Q96QZ7 1491 aaPredicted RBP20.35■□□□□ 0.85
DENND3-216ENST00000521477 PBRM1Q86U86 1689 aa20.31■□□□□ 0.84
DENND3-216ENST00000521477 ERICH3Q5RHP9 1530 aa20.27■□□□□ 0.84
DENND3-216ENST00000521477 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
DENND3-216ENST00000521477 DNAJC5Q9H3Z4 198 aa20.24■□□□□ 0.83
DENND3-216ENST00000521477 KIF27Q86VH2 1401 aa20.24■□□□□ 0.83
DENND3-216ENST00000521477 SYNJ2O15056 1496 aa20.23■□□□□ 0.83
DENND3-216ENST00000521477 OSCARQ8IYS5 282 aa20.21■□□□□ 0.83
DENND3-216ENST00000521477 CHD1O14646 1710 aa20.19■□□□□ 0.82
DENND3-216ENST00000521477 ADAMTS12P58397 1594 aa20.17■□□□□ 0.82
DENND3-216ENST00000521477 FHAD1B1AJZ9 1412 aa20.16■□□□□ 0.82
DENND3-216ENST00000521477 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
DENND3-216ENST00000521477 CUL7Q14999 1698 aa20.13■□□□□ 0.81
DENND3-216ENST00000521477 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
DENND3-216ENST00000521477 GRIN2AQ12879 1464 aa20.08■□□□□ 0.81
DENND3-216ENST00000521477 FBLN2P98095 1184 aa20.07■□□□□ 0.8
DENND3-216ENST00000521477 IGF1RP08069 1367 aa20.06■□□□□ 0.8
DENND3-216ENST00000521477 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.8
DENND3-216ENST00000521477 EEA1Q15075 1411 aa20.02■□□□□ 0.79
DENND3-216ENST00000521477 NUP160Q12769 1436 aa20.01■□□□□ 0.79
DENND3-216ENST00000521477 CARMIL1Q5VZK9 1371 aa19.96■□□□□ 0.79
DENND3-216ENST00000521477 CHIC1Q5VXU3 224 aa19.94■□□□□ 0.78
DENND3-216ENST00000521477 CEP170Q5SW79 1584 aa19.93■□□□□ 0.78
DENND3-216ENST00000521477 RAPGEF2Q9Y4G8 1499 aa19.9■□□□□ 0.78
DENND3-216ENST00000521477 ARHGEF11O15085 1522 aa19.89■□□□□ 0.77
DENND3-216ENST00000521477 RUSC2Q8N2Y8 1516 aa19.88■□□□□ 0.77
DENND3-216ENST00000521477 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
DENND3-216ENST00000521477 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
DENND3-216ENST00000521477 SHROOM2Q13796 1616 aa19.86■□□□□ 0.77
DENND3-216ENST00000521477 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms