RNA–Protein interactions for RNA: ENST00000521473.5

EXTL3-209, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 3

Gene EXTL3, Length 601 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-209ENST00000521473 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
EXTL3-209ENST00000521473 ABCC9O60706 1549 aa15.25■□□□□ 0.03
EXTL3-209ENST00000521473 CCDC180Q9P1Z9 1646 aa15.23■□□□□ 0.03
EXTL3-209ENST00000521473 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.05
EXTL3-209ENST00000521473 RB1CC1Q8TDY2 1594 aa14.47□□□□□ -0.09
EXTL3-209ENST00000521473 NACADO15069 1562 aa14.34□□□□□ -0.11
EXTL3-209ENST00000521473 UNC13AQ9UPW8 1703 aa14.32□□□□□ -0.12
EXTL3-209ENST00000521473 DCAF8L2P0C7V8 631 aa14.27□□□□□ -0.13
EXTL3-209ENST00000521473 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
EXTL3-209ENST00000521473 BICRAQ9NZM4 1560 aa14.11□□□□□ -0.15
EXTL3-209ENST00000521473 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
EXTL3-209ENST00000521473 ZCCHC6Q5VYS8 1495 aaKnown RBP14.01□□□□□ -0.17
EXTL3-209ENST00000521473 DNAJC5Q9H3Z4 198 aa14□□□□□ -0.17
EXTL3-209ENST00000521473 DCAF1Q9Y4B6 1507 aa13.93□□□□□ -0.18
EXTL3-209ENST00000521473 SCRIBQ14160 1630 aa13.9□□□□□ -0.18
EXTL3-209ENST00000521473 SHROOM4Q9ULL8 1493 aa13.79□□□□□ -0.2
EXTL3-209ENST00000521473 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
EXTL3-209ENST00000521473 EIF4G1Q04637 1599 aaKnown RBP13.73□□□□□ -0.21
EXTL3-209ENST00000521473 CECR2Q9BXF3 1484 aa13.7□□□□□ -0.22
EXTL3-209ENST00000521473 CUX2O14529 1486 aa13.26□□□□□ -0.29
EXTL3-209ENST00000521473 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
EXTL3-209ENST00000521473 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
EXTL3-209ENST00000521473 ATAD2BQ9ULI0 1458 aa13.21□□□□□ -0.3
EXTL3-209ENST00000521473 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
EXTL3-209ENST00000521473 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
EXTL3-209ENST00000521473 HMGXB3Q12766 1538 aa13.15□□□□□ -0.3
EXTL3-209ENST00000521473 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
EXTL3-209ENST00000521473 NESP48681 1621 aa13.12□□□□□ -0.31
EXTL3-209ENST00000521473 BAZ1AQ9NRL2 1556 aaPredicted RBP13.11□□□□□ -0.31
EXTL3-209ENST00000521473 BAZ1BQ9UIG0 1483 aaKnown RBP13.08□□□□□ -0.32
EXTL3-209ENST00000521473 PEG3Q9GZU2 1588 aa13.07□□□□□ -0.32
EXTL3-209ENST00000521473 MROH2BQ7Z745 1585 aa13.07□□□□□ -0.32
EXTL3-209ENST00000521473 KIF21AQ7Z4S6 1674 aa13.01□□□□□ -0.33
EXTL3-209ENST00000521473 THOC2Q8NI27 1593 aaKnown RBP12.99□□□□□ -0.33
EXTL3-209ENST00000521473 LAMC3Q9Y6N6 1575 aa12.97□□□□□ -0.33
EXTL3-209ENST00000521473 WIZO95785 1651 aa12.96□□□□□ -0.34
EXTL3-209ENST00000521473 PDS5BQ9NTI5 1447 aa12.84□□□□□ -0.35
EXTL3-209ENST00000521473 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
EXTL3-209ENST00000521473 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
EXTL3-209ENST00000521473 WDR62O43379 1518 aa12.76□□□□□ -0.37
EXTL3-209ENST00000521473 RSF1Q96T23 1441 aaPredicted RBP12.74□□□□□ -0.37
EXTL3-209ENST00000521473 CEP164Q9UPV0 1460 aa12.72□□□□□ -0.37
EXTL3-209ENST00000521473 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
EXTL3-209ENST00000521473 FANCD2Q9BXW9 1451 aa12.71□□□□□ -0.38
EXTL3-209ENST00000521473 PRDM2Q13029 1718 aa12.7□□□□□ -0.38
EXTL3-209ENST00000521473 CFTRP13569 1480 aa12.68□□□□□ -0.38
EXTL3-209ENST00000521473 OSCARQ8IYS5 282 aa12.68□□□□□ -0.38
EXTL3-209ENST00000521473 URB2Q14146 1524 aaKnown RBP12.63□□□□□ -0.39
EXTL3-209ENST00000521473 CCDC88BA6NC98 1476 aa12.57□□□□□ -0.4
EXTL3-209ENST00000521473 AEBP2Q6ZN18 517 aaPredicted RBP12.54□□□□□ -0.4
EXTL3-209ENST00000521473 ZNF608Q9ULD9 1512 aaPredicted RBP12.49□□□□□ -0.41
EXTL3-209ENST00000521473 TOPBP1Q92547 1522 aa12.48□□□□□ -0.41
EXTL3-209ENST00000521473 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
EXTL3-209ENST00000521473 EIF4G3O43432 1585 aaKnown RBP12.44□□□□□ -0.42
EXTL3-209ENST00000521473 IFT140Q96RY7 1462 aa12.44□□□□□ -0.42
EXTL3-209ENST00000521473 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
EXTL3-209ENST00000521473 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
EXTL3-209ENST00000521473 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
EXTL3-209ENST00000521473 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
EXTL3-209ENST00000521473 CYB5RLQ6IPT4 315 aa12.42□□□□□ -0.42
EXTL3-209ENST00000521473 CHD1O14646 1710 aa12.42□□□□□ -0.42
EXTL3-209ENST00000521473 TARBP1Q13395 1621 aaKnown RBP12.4□□□□□ -0.42
EXTL3-209ENST00000521473 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
EXTL3-209ENST00000521473 ARHGEF11O15085 1522 aa12.36□□□□□ -0.43
EXTL3-209ENST00000521473 AQRO60306 1485 aaKnown RBP eCLIP12.34□□□□□ -0.43
EXTL3-209ENST00000521473 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
EXTL3-209ENST00000521473 RAD54L2Q9Y4B4 1467 aa12.32□□□□□ -0.44
EXTL3-209ENST00000521473 CUX1P39880 1505 aa12.27□□□□□ -0.44
EXTL3-209ENST00000521473 FGD5Q6ZNL6 1462 aa12.27□□□□□ -0.45
EXTL3-209ENST00000521473 TDRD9Q8NDG6 1382 aaKnown RBP12.26□□□□□ -0.45
EXTL3-209ENST00000521473 SOGA1O94964 1423 aa12.26□□□□□ -0.45
EXTL3-209ENST00000521473 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
EXTL3-209ENST00000521473 FBLN2P98095 1184 aa12.24□□□□□ -0.45
EXTL3-209ENST00000521473 PBRM1Q86U86 1689 aa12.22□□□□□ -0.45
EXTL3-209ENST00000521473 SNAPC4Q5SXM2 1469 aa12.22□□□□□ -0.45
EXTL3-209ENST00000521473 ARAP1Q96P48 1450 aa12.22□□□□□ -0.45
EXTL3-209ENST00000521473 CLASP1Q7Z460 1538 aa12.18□□□□□ -0.46
EXTL3-209ENST00000521473 SUPT5HO00267 1087 aaKnown RBP12.16□□□□□ -0.46
EXTL3-209ENST00000521473 GRIN2BQ13224 1484 aa12.15□□□□□ -0.46
EXTL3-209ENST00000521473 MAGI1Q96QZ7 1491 aaPredicted RBP12.15□□□□□ -0.46
EXTL3-209ENST00000521473 SYNJ1O43426 1573 aa12.15□□□□□ -0.46
EXTL3-209ENST00000521473 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.47
EXTL3-209ENST00000521473 SYNJ2O15056 1496 aa12.13□□□□□ -0.47
EXTL3-209ENST00000521473 CHMP7Q8WUX9 453 aaPredicted RBP12.12□□□□□ -0.47
EXTL3-209ENST00000521473 GAPVD1Q14C86 1478 aa12.12□□□□□ -0.47
EXTL3-209ENST00000521473 ABCA10Q8WWZ4 1543 aa12.1□□□□□ -0.47
EXTL3-209ENST00000521473 BIVM-ERCC5R4GMW8 1640 aa12.09□□□□□ -0.47
EXTL3-209ENST00000521473 ILDR1Q86SU0 546 aaPredicted RBP12.06□□□□□ -0.48
EXTL3-209ENST00000521473 TOP2BQ02880 1626 aa12.06□□□□□ -0.48
EXTL3-209ENST00000521473 ADAMTS12P58397 1594 aa12.05□□□□□ -0.48
EXTL3-209ENST00000521473 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
EXTL3-209ENST00000521473 CEP170Q5SW79 1584 aa12.03□□□□□ -0.48
EXTL3-209ENST00000521473 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
EXTL3-209ENST00000521473 GRIN2AQ12879 1464 aa12.02□□□□□ -0.48
EXTL3-209ENST00000521473 SHROOM2Q13796 1616 aa11.97□□□□□ -0.49
EXTL3-209ENST00000521473 NUP160Q12769 1436 aa11.96□□□□□ -0.49
EXTL3-209ENST00000521473 ERICH3Q5RHP9 1530 aa11.95□□□□□ -0.5
EXTL3-209ENST00000521473 FHAD1B1AJZ9 1412 aa11.94□□□□□ -0.5
EXTL3-209ENST00000521473 KIF13AQ9H1H9 1805 aa11.9□□□□□ -0.5
EXTL3-209ENST00000521473 RUSC2Q8N2Y8 1516 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms