RNA–Protein interactions for RNA: ENST00000521431.1

PSEN2-209, Transcript of presenilin 2, humanhuman

TSL 3

Gene PSEN2, Length 730 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-209ENST00000521431 NISCHQ9Y2I1 1504 aa48.72■■■■■ 5.39
PSEN2-209ENST00000521431 ABCC9O60706 1549 aa44.09■■■■■ 4.65
PSEN2-209ENST00000521431 CCDC180Q9P1Z9 1646 aa43.86■■■■■ 4.61
PSEN2-209ENST00000521431 RB1CC1Q8TDY2 1594 aa41.9■■■■■ 4.3
PSEN2-209ENST00000521431 NACADO15069 1562 aa41.54■■■■■ 4.24
PSEN2-209ENST00000521431 DNAJC5BQ9UF47 199 aa41.52■■■■■ 4.24
PSEN2-209ENST00000521431 DCAF8L2P0C7V8 631 aa41.26■■■■■ 4.2
PSEN2-209ENST00000521431 PABPN1Q86U42 306 aaKnown RBP eCLIP40.99■■■■■ 4.15
PSEN2-209ENST00000521431 MYO15BQ96JP2 1530 aa40.9■■■■■ 4.14
PSEN2-209ENST00000521431 UNC13AQ9UPW8 1703 aa40.85■■■■■ 4.13
PSEN2-209ENST00000521431 BICRAQ9NZM4 1560 aa40.61■■■■■ 4.09
PSEN2-209ENST00000521431 ZCCHC6Q5VYS8 1495 aaKnown RBP40.32■■■■■ 4.05
PSEN2-209ENST00000521431 DCAF1Q9Y4B6 1507 aa40.26■■■■■ 4.03
PSEN2-209ENST00000521431 SHROOM4Q9ULL8 1493 aa40.15■■■■■ 4.02
PSEN2-209ENST00000521431 SCRIBQ14160 1630 aa39.92■■■■□ 3.98
PSEN2-209ENST00000521431 CC2D2AQ9P2K1 1620 aa39.82■■■■□ 3.96
PSEN2-209ENST00000521431 CECR2Q9BXF3 1484 aa39.76■■■■□ 3.96
PSEN2-209ENST00000521431 EIF4G1Q04637 1599 aaKnown RBP39.67■■■■□ 3.94
PSEN2-209ENST00000521431 DNAJC5Q9H3Z4 198 aa38.4■■■■□ 3.74
PSEN2-209ENST00000521431 NCAPD3P42695 1498 aa38.34■■■■□ 3.73
PSEN2-209ENST00000521431 CUX2O14529 1486 aa38.17■■■■□ 3.7
PSEN2-209ENST00000521431 ATAD2BQ9ULI0 1458 aa38.17■■■■□ 3.7
PSEN2-209ENST00000521431 ERCC6Q03468 1493 aa38.15■■■■□ 3.7
PSEN2-209ENST00000521431 SMARCA2P51531 1590 aa38.09■■■■□ 3.69
PSEN2-209ENST00000521431 SMARCA4P51532 1647 aa38.07■■■■□ 3.68
PSEN2-209ENST00000521431 HMGXB3Q12766 1538 aa38.04■■■■□ 3.68
PSEN2-209ENST00000521431 BAZ1AQ9NRL2 1556 aaPredicted RBP37.87■■■■□ 3.65
PSEN2-209ENST00000521431 BAZ1BQ9UIG0 1483 aaKnown RBP37.82■■■■□ 3.64
PSEN2-209ENST00000521431 NESP48681 1621 aa37.77■■■■□ 3.64
PSEN2-209ENST00000521431 PEG3Q9GZU2 1588 aa37.71■■■■□ 3.63
PSEN2-209ENST00000521431 LAMC3Q9Y6N6 1575 aa37.54■■■■□ 3.6
PSEN2-209ENST00000521431 MROH2BQ7Z745 1585 aa37.51■■■■□ 3.6
PSEN2-209ENST00000521431 THOC2Q8NI27 1593 aaKnown RBP37.47■■■■□ 3.59
PSEN2-209ENST00000521431 PDS5BQ9NTI5 1447 aa37.35■■■■□ 3.57
PSEN2-209ENST00000521431 KIF21AQ7Z4S6 1674 aa37.28■■■■□ 3.56
PSEN2-209ENST00000521431 CADPSQ9ULU8 1353 aa37.17■■■■□ 3.54
PSEN2-209ENST00000521431 WIZO95785 1651 aa37.05■■■■□ 3.52
PSEN2-209ENST00000521431 MRC2Q9UBG0 1479 aa37.02■■■■□ 3.52
PSEN2-209ENST00000521431 WDR62O43379 1518 aa36.93■■■■□ 3.5
PSEN2-209ENST00000521431 CEP164Q9UPV0 1460 aa36.83■■■■□ 3.49
PSEN2-209ENST00000521431 FANCD2Q9BXW9 1451 aa36.75■■■■□ 3.47
PSEN2-209ENST00000521431 CFTRP13569 1480 aa36.68■■■■□ 3.46
PSEN2-209ENST00000521431 RSF1Q96T23 1441 aaPredicted RBP36.65■■■■□ 3.46
PSEN2-209ENST00000521431 TRIM41Q8WV44 630 aa36.62■■■■□ 3.45
PSEN2-209ENST00000521431 TOP2AP11388 1531 aaKnown RBP36.6■■■■□ 3.45
PSEN2-209ENST00000521431 URB2Q14146 1524 aaKnown RBP36.43■■■■□ 3.42
PSEN2-209ENST00000521431 OSCARQ8IYS5 282 aa36.37■■■■□ 3.41
PSEN2-209ENST00000521431 PRDM2Q13029 1718 aa36.28■■■■□ 3.4
PSEN2-209ENST00000521431 CCDC88BA6NC98 1476 aa36.17■■■■□ 3.38
PSEN2-209ENST00000521431 IFT140Q96RY7 1462 aa36.11■■■■□ 3.37
PSEN2-209ENST00000521431 TOPBP1Q92547 1522 aa36.01■■■■□ 3.36
PSEN2-209ENST00000521431 ZNF608Q9ULD9 1512 aaPredicted RBP36.01■■■■□ 3.36
PSEN2-209ENST00000521431 ABCC8Q09428 1581 aa35.98■■■■□ 3.35
PSEN2-209ENST00000521431 RIMBP3CA6NJZ7 1639 aa35.89■■■■□ 3.34
PSEN2-209ENST00000521431 RIMBP3BA6NNM3 1639 aa35.89■■■■□ 3.34
PSEN2-209ENST00000521431 RIMBP3Q9UFD9 1639 aa35.89■■■■□ 3.34
PSEN2-209ENST00000521431 DNMBPQ6XZF7 1577 aa35.87■■■■□ 3.33
PSEN2-209ENST00000521431 EIF4G3O43432 1585 aaKnown RBP35.83■■■■□ 3.33
PSEN2-209ENST00000521431 ARHGEF11O15085 1522 aa35.76■■■■□ 3.31
PSEN2-209ENST00000521431 TARBP1Q13395 1621 aaKnown RBP35.68■■■■□ 3.3
PSEN2-209ENST00000521431 AQRO60306 1485 aaKnown RBP eCLIP35.67■■■■□ 3.3
PSEN2-209ENST00000521431 POLA1P09884 1462 aaPredicted RBP35.62■■■■□ 3.29
PSEN2-209ENST00000521431 CHD1O14646 1710 aa35.59■■■■□ 3.29
PSEN2-209ENST00000521431 FBLN2P98095 1184 aa35.53■■■■□ 3.28
PSEN2-209ENST00000521431 CYB5RLQ6IPT4 315 aa35.51■■■■□ 3.28
PSEN2-209ENST00000521431 SOGA1O94964 1423 aa35.48■■■■□ 3.27
PSEN2-209ENST00000521431 RAD54L2Q9Y4B4 1467 aa35.48■■■■□ 3.27
PSEN2-209ENST00000521431 TDRD9Q8NDG6 1382 aaKnown RBP35.4■■■■□ 3.26
PSEN2-209ENST00000521431 WDR97A6NE52 1622 aa35.39■■■■□ 3.26
PSEN2-209ENST00000521431 ARAP1Q96P48 1450 aa35.37■■■■□ 3.25
PSEN2-209ENST00000521431 FGD5Q6ZNL6 1462 aa35.36■■■■□ 3.25
PSEN2-209ENST00000521431 SNAPC4Q5SXM2 1469 aa35.32■■■■□ 3.24
PSEN2-209ENST00000521431 CUX1P39880 1505 aa35.27■■■■□ 3.24
PSEN2-209ENST00000521431 MAGI1Q96QZ7 1491 aaPredicted RBP35.24■■■■□ 3.23
PSEN2-209ENST00000521431 TRHP20396 242 aaPredicted RBP35.24■■■■□ 3.23
PSEN2-209ENST00000521431 CHMP7Q8WUX9 453 aaPredicted RBP35.24■■■■□ 3.23
PSEN2-209ENST00000521431 GRIN2BQ13224 1484 aa35.21■■■■□ 3.23
PSEN2-209ENST00000521431 CLASP1Q7Z460 1538 aa35.2■■■■□ 3.23
PSEN2-209ENST00000521431 SYNJ1O43426 1573 aa35.2■■■■□ 3.23
PSEN2-209ENST00000521431 SYNJ2O15056 1496 aa35.12■■■■□ 3.21
PSEN2-209ENST00000521431 GAPVD1Q14C86 1478 aa35.04■■■■□ 3.2
PSEN2-209ENST00000521431 PBRM1Q86U86 1689 aa35.01■■■■□ 3.2
PSEN2-209ENST00000521431 ABCA10Q8WWZ4 1543 aa34.96■■■■□ 3.19
PSEN2-209ENST00000521431 ABCA5Q8WWZ7 1642 aa34.92■■■■□ 3.18
PSEN2-209ENST00000521431 SUPT5HO00267 1087 aaKnown RBP34.84■■■■□ 3.17
PSEN2-209ENST00000521431 WRNQ14191 1432 aaPredicted RBP eCLIP34.79■■■■□ 3.16
PSEN2-209ENST00000521431 GRIN2AQ12879 1464 aa34.74■■■■□ 3.15
PSEN2-209ENST00000521431 ADAMTS12P58397 1594 aa34.68■■■■□ 3.14
PSEN2-209ENST00000521431 TOP2BQ02880 1626 aa34.66■■■■□ 3.14
PSEN2-209ENST00000521431 BIVM-ERCC5R4GMW8 1640 aa34.66■■■■□ 3.14
PSEN2-209ENST00000521431 NUP160Q12769 1436 aa34.63■■■■□ 3.13
PSEN2-209ENST00000521431 FHAD1B1AJZ9 1412 aa34.6■■■■□ 3.13
PSEN2-209ENST00000521431 CEP170Q5SW79 1584 aa34.6■■■■□ 3.13
PSEN2-209ENST00000521431 ERCC6L2Q5T890 1561 aa34.58■■■■□ 3.13
PSEN2-209ENST00000521431 ERICH3Q5RHP9 1530 aa34.53■■■■□ 3.12
PSEN2-209ENST00000521431 SHROOM2Q13796 1616 aa34.49■■■■□ 3.11
PSEN2-209ENST00000521431 AEBP2Q6ZN18 517 aaPredicted RBP34.44■■■■□ 3.1
PSEN2-209ENST00000521431 PRG4Q92954 1404 aaPredicted RBP34.32■■■■□ 3.08
PSEN2-209ENST00000521431 JPH4Q96JJ6 628 aa34.28■■■■□ 3.08
PSEN2-209ENST00000521431 RUSC2Q8N2Y8 1516 aa34.2■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms