RNA–Protein interactions for RNA: ENST00000521339.5

GABRA1-207, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-207ENST00000521339 NISCHQ9Y2I1 1504 aa25.72■■□□□ 1.71
GABRA1-207ENST00000521339 CCDC180Q9P1Z9 1646 aa22.91■■□□□ 1.26
GABRA1-207ENST00000521339 ABCC9O60706 1549 aa22.41■■□□□ 1.18
GABRA1-207ENST00000521339 RB1CC1Q8TDY2 1594 aa21.56■■□□□ 1.04
GABRA1-207ENST00000521339 DCAF8L2P0C7V8 631 aa21.51■■□□□ 1.03
GABRA1-207ENST00000521339 NACADO15069 1562 aa21.51■■□□□ 1.03
GABRA1-207ENST00000521339 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
GABRA1-207ENST00000521339 MYO15BQ96JP2 1530 aa21.34■■□□□ 1.01
GABRA1-207ENST00000521339 DCAF1Q9Y4B6 1507 aa21.25■□□□□ 0.99
GABRA1-207ENST00000521339 UNC13AQ9UPW8 1703 aa21.14■□□□□ 0.97
GABRA1-207ENST00000521339 SCRIBQ14160 1630 aa20.93■□□□□ 0.94
GABRA1-207ENST00000521339 PABPN1Q86U42 306 aaKnown RBP eCLIP20.91■□□□□ 0.94
GABRA1-207ENST00000521339 BICRAQ9NZM4 1560 aa20.89■□□□□ 0.94
GABRA1-207ENST00000521339 SHROOM4Q9ULL8 1493 aa20.64■□□□□ 0.89
GABRA1-207ENST00000521339 DNAJC5BQ9UF47 199 aa20.52■□□□□ 0.88
GABRA1-207ENST00000521339 EIF4G1Q04637 1599 aaKnown RBP20.35■□□□□ 0.85
GABRA1-207ENST00000521339 CC2D2AQ9P2K1 1620 aa20.29■□□□□ 0.84
GABRA1-207ENST00000521339 CECR2Q9BXF3 1484 aa20.12■□□□□ 0.81
GABRA1-207ENST00000521339 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
GABRA1-207ENST00000521339 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
GABRA1-207ENST00000521339 SMARCA2P51531 1590 aa19.84■□□□□ 0.77
GABRA1-207ENST00000521339 ATAD2BQ9ULI0 1458 aa19.84■□□□□ 0.77
GABRA1-207ENST00000521339 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.76
GABRA1-207ENST00000521339 NCAPD3P42695 1498 aa19.81■□□□□ 0.76
GABRA1-207ENST00000521339 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
GABRA1-207ENST00000521339 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
GABRA1-207ENST00000521339 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
GABRA1-207ENST00000521339 WIZO95785 1651 aa19.65■□□□□ 0.74
GABRA1-207ENST00000521339 RSF1Q96T23 1441 aaPredicted RBP19.57■□□□□ 0.72
GABRA1-207ENST00000521339 TOP2AP11388 1531 aaKnown RBP19.41■□□□□ 0.7
GABRA1-207ENST00000521339 NESP48681 1621 aa19.39■□□□□ 0.69
GABRA1-207ENST00000521339 LAMC3Q9Y6N6 1575 aa19.34■□□□□ 0.69
GABRA1-207ENST00000521339 ERCC6Q03468 1493 aa19.33■□□□□ 0.68
GABRA1-207ENST00000521339 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
GABRA1-207ENST00000521339 KIF21AQ7Z4S6 1674 aa19.22■□□□□ 0.67
GABRA1-207ENST00000521339 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
GABRA1-207ENST00000521339 CCDC88BA6NC98 1476 aa19.17■□□□□ 0.66
GABRA1-207ENST00000521339 CFTRP13569 1480 aa19.13■□□□□ 0.65
GABRA1-207ENST00000521339 THOC2Q8NI27 1593 aaKnown RBP19.11■□□□□ 0.65
GABRA1-207ENST00000521339 SUPT5HO00267 1087 aaKnown RBP19.1■□□□□ 0.65
GABRA1-207ENST00000521339 PRDM2Q13029 1718 aa19.1■□□□□ 0.65
GABRA1-207ENST00000521339 CUX2O14529 1486 aa19.09■□□□□ 0.65
GABRA1-207ENST00000521339 FANCD2Q9BXW9 1451 aa19.05■□□□□ 0.64
GABRA1-207ENST00000521339 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
GABRA1-207ENST00000521339 MRC2Q9UBG0 1479 aa19■□□□□ 0.63
GABRA1-207ENST00000521339 WDR62O43379 1518 aa18.95■□□□□ 0.62
GABRA1-207ENST00000521339 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
GABRA1-207ENST00000521339 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
GABRA1-207ENST00000521339 DNMBPQ6XZF7 1577 aa18.74■□□□□ 0.59
GABRA1-207ENST00000521339 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
GABRA1-207ENST00000521339 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
GABRA1-207ENST00000521339 CUX1P39880 1505 aa18.61■□□□□ 0.57
GABRA1-207ENST00000521339 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.57
GABRA1-207ENST00000521339 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
GABRA1-207ENST00000521339 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
GABRA1-207ENST00000521339 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
GABRA1-207ENST00000521339 EIF4G3O43432 1585 aaKnown RBP18.52■□□□□ 0.56
GABRA1-207ENST00000521339 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
GABRA1-207ENST00000521339 SOGA1O94964 1423 aa18.49■□□□□ 0.55
GABRA1-207ENST00000521339 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
GABRA1-207ENST00000521339 DNAJC5Q9H3Z4 198 aa18.47■□□□□ 0.55
GABRA1-207ENST00000521339 BIVM-ERCC5R4GMW8 1640 aa18.47■□□□□ 0.55
GABRA1-207ENST00000521339 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
GABRA1-207ENST00000521339 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
GABRA1-207ENST00000521339 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
GABRA1-207ENST00000521339 AQRO60306 1485 aaKnown RBP eCLIP18.44■□□□□ 0.54
GABRA1-207ENST00000521339 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
GABRA1-207ENST00000521339 ABCA10Q8WWZ4 1543 aa18.35■□□□□ 0.53
GABRA1-207ENST00000521339 PBRM1Q86U86 1689 aa18.33■□□□□ 0.52
GABRA1-207ENST00000521339 CHD1O14646 1710 aa18.32■□□□□ 0.52
GABRA1-207ENST00000521339 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
GABRA1-207ENST00000521339 GRIN2BQ13224 1484 aa18.29■□□□□ 0.52
GABRA1-207ENST00000521339 GAPVD1Q14C86 1478 aa18.29■□□□□ 0.52
GABRA1-207ENST00000521339 SNAPC4Q5SXM2 1469 aa18.28■□□□□ 0.52
GABRA1-207ENST00000521339 OSCARQ8IYS5 282 aa18.28■□□□□ 0.52
GABRA1-207ENST00000521339 FBLN2P98095 1184 aa18.24■□□□□ 0.51
GABRA1-207ENST00000521339 MAGI1Q96QZ7 1491 aaPredicted RBP18.24■□□□□ 0.51
GABRA1-207ENST00000521339 SYNJ2O15056 1496 aa18.17■□□□□ 0.5
GABRA1-207ENST00000521339 CHMP7Q8WUX9 453 aaPredicted RBP18.16■□□□□ 0.5
GABRA1-207ENST00000521339 ERICH3Q5RHP9 1530 aa18.14■□□□□ 0.49
GABRA1-207ENST00000521339 ADAMTS12P58397 1594 aa18.14■□□□□ 0.49
GABRA1-207ENST00000521339 KIF27Q86VH2 1401 aa18.08■□□□□ 0.49
GABRA1-207ENST00000521339 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
GABRA1-207ENST00000521339 GRIN2AQ12879 1464 aa18.06■□□□□ 0.48
GABRA1-207ENST00000521339 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
GABRA1-207ENST00000521339 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
GABRA1-207ENST00000521339 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
GABRA1-207ENST00000521339 CLASP1Q7Z460 1538 aa18.05■□□□□ 0.48
GABRA1-207ENST00000521339 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
GABRA1-207ENST00000521339 ARHGEF11O15085 1522 aa18.03■□□□□ 0.48
GABRA1-207ENST00000521339 CUL7Q14999 1698 aa18.02■□□□□ 0.47
GABRA1-207ENST00000521339 CEP170Q5SW79 1584 aa18■□□□□ 0.47
GABRA1-207ENST00000521339 IGF1RP08069 1367 aa17.98■□□□□ 0.47
GABRA1-207ENST00000521339 NUP160Q12769 1436 aa17.96■□□□□ 0.47
GABRA1-207ENST00000521339 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
GABRA1-207ENST00000521339 CARMIL1Q5VZK9 1371 aa17.89■□□□□ 0.45
GABRA1-207ENST00000521339 ARAP1Q96P48 1450 aa17.87■□□□□ 0.45
GABRA1-207ENST00000521339 SHROOM2Q13796 1616 aa17.86■□□□□ 0.45
GABRA1-207ENST00000521339 CYB5RLQ6IPT4 315 aa17.84■□□□□ 0.45
GABRA1-207ENST00000521339 ERCC6L2Q5T890 1561 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms