RNA–Protein interactions for RNA: ENST00000521150.1

SLIT3-208, Transcript of slit guidance ligand 3, humanhuman

TSL 2

Gene SLIT3, Length 987 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-208ENST00000521150 NISCHQ9Y2I1 1504 aa51.23■■■■■ 5.79
SLIT3-208ENST00000521150 ABCC9O60706 1549 aa46.11■■■■■ 4.97
SLIT3-208ENST00000521150 CCDC180Q9P1Z9 1646 aa45.95■■■■■ 4.95
SLIT3-208ENST00000521150 RB1CC1Q8TDY2 1594 aa43.84■■■■■ 4.61
SLIT3-208ENST00000521150 NACADO15069 1562 aa43.54■■■■■ 4.56
SLIT3-208ENST00000521150 DNAJC5BQ9UF47 199 aa43.44■■■■■ 4.54
SLIT3-208ENST00000521150 DCAF8L2P0C7V8 631 aa43.38■■■■■ 4.53
SLIT3-208ENST00000521150 PABPN1Q86U42 306 aaKnown RBP eCLIP42.97■■■■■ 4.47
SLIT3-208ENST00000521150 MYO15BQ96JP2 1530 aa42.92■■■■■ 4.46
SLIT3-208ENST00000521150 UNC13AQ9UPW8 1703 aa42.76■■■■■ 4.44
SLIT3-208ENST00000521150 BICRAQ9NZM4 1560 aa42.55■■■■■ 4.4
SLIT3-208ENST00000521150 ZCCHC6Q5VYS8 1495 aaKnown RBP42.4■■■■■ 4.38
SLIT3-208ENST00000521150 DCAF1Q9Y4B6 1507 aa42.32■■■■■ 4.37
SLIT3-208ENST00000521150 SHROOM4Q9ULL8 1493 aa42■■■■■ 4.31
SLIT3-208ENST00000521150 SCRIBQ14160 1630 aa41.84■■■■■ 4.29
SLIT3-208ENST00000521150 CC2D2AQ9P2K1 1620 aa41.63■■■■■ 4.26
SLIT3-208ENST00000521150 CECR2Q9BXF3 1484 aa41.58■■■■■ 4.25
SLIT3-208ENST00000521150 EIF4G1Q04637 1599 aaKnown RBP41.52■■■■■ 4.24
SLIT3-208ENST00000521150 NCAPD3P42695 1498 aa40.24■■■■■ 4.03
SLIT3-208ENST00000521150 ATAD2BQ9ULI0 1458 aa40.07■■■■■ 4
SLIT3-208ENST00000521150 DNAJC5Q9H3Z4 198 aa40.01■■■■■ 4
SLIT3-208ENST00000521150 SMARCA4P51532 1647 aa39.94■■■■□ 3.98
SLIT3-208ENST00000521150 SMARCA2P51531 1590 aa39.93■■■■□ 3.98
SLIT3-208ENST00000521150 HMGXB3Q12766 1538 aa39.86■■■■□ 3.97
SLIT3-208ENST00000521150 ERCC6Q03468 1493 aa39.83■■■■□ 3.97
SLIT3-208ENST00000521150 CUX2O14529 1486 aa39.81■■■■□ 3.96
SLIT3-208ENST00000521150 BAZ1AQ9NRL2 1556 aaPredicted RBP39.76■■■■□ 3.96
SLIT3-208ENST00000521150 BAZ1BQ9UIG0 1483 aaKnown RBP39.64■■■■□ 3.94
SLIT3-208ENST00000521150 PEG3Q9GZU2 1588 aa39.59■■■■□ 3.93
SLIT3-208ENST00000521150 NESP48681 1621 aa39.57■■■■□ 3.92
SLIT3-208ENST00000521150 MROH2BQ7Z745 1585 aa39.46■■■■□ 3.91
SLIT3-208ENST00000521150 LAMC3Q9Y6N6 1575 aa39.29■■■■□ 3.88
SLIT3-208ENST00000521150 THOC2Q8NI27 1593 aaKnown RBP39.15■■■■□ 3.86
SLIT3-208ENST00000521150 PDS5BQ9NTI5 1447 aa39.13■■■■□ 3.85
SLIT3-208ENST00000521150 CADPSQ9ULU8 1353 aa39.02■■■■□ 3.84
SLIT3-208ENST00000521150 KIF21AQ7Z4S6 1674 aa39■■■■□ 3.83
SLIT3-208ENST00000521150 WIZO95785 1651 aa38.94■■■■□ 3.82
SLIT3-208ENST00000521150 MRC2Q9UBG0 1479 aa38.74■■■■□ 3.79
SLIT3-208ENST00000521150 RSF1Q96T23 1441 aaPredicted RBP38.63■■■■□ 3.78
SLIT3-208ENST00000521150 WDR62O43379 1518 aa38.63■■■■□ 3.77
SLIT3-208ENST00000521150 CEP164Q9UPV0 1460 aa38.56■■■■□ 3.76
SLIT3-208ENST00000521150 CFTRP13569 1480 aa38.53■■■■□ 3.76
SLIT3-208ENST00000521150 FANCD2Q9BXW9 1451 aa38.53■■■■□ 3.76
SLIT3-208ENST00000521150 TOP2AP11388 1531 aaKnown RBP38.46■■■■□ 3.75
SLIT3-208ENST00000521150 URB2Q14146 1524 aaKnown RBP38.19■■■■□ 3.7
SLIT3-208ENST00000521150 TRIM41Q8WV44 630 aa38.16■■■■□ 3.7
SLIT3-208ENST00000521150 OSCARQ8IYS5 282 aa38.08■■■■□ 3.69
SLIT3-208ENST00000521150 CCDC88BA6NC98 1476 aa38.08■■■■□ 3.69
SLIT3-208ENST00000521150 PRDM2Q13029 1718 aa38■■■■□ 3.67
SLIT3-208ENST00000521150 IFT140Q96RY7 1462 aa37.82■■■■□ 3.64
SLIT3-208ENST00000521150 TOPBP1Q92547 1522 aa37.77■■■■□ 3.64
SLIT3-208ENST00000521150 ZNF608Q9ULD9 1512 aaPredicted RBP37.75■■■■□ 3.63
SLIT3-208ENST00000521150 ABCC8Q09428 1581 aa37.74■■■■□ 3.63
SLIT3-208ENST00000521150 DNMBPQ6XZF7 1577 aa37.6■■■■□ 3.61
SLIT3-208ENST00000521150 EIF4G3O43432 1585 aaKnown RBP37.47■■■■□ 3.59
SLIT3-208ENST00000521150 RIMBP3CA6NJZ7 1639 aa37.44■■■■□ 3.58
SLIT3-208ENST00000521150 RIMBP3BA6NNM3 1639 aa37.44■■■■□ 3.58
SLIT3-208ENST00000521150 RIMBP3Q9UFD9 1639 aa37.44■■■■□ 3.58
SLIT3-208ENST00000521150 AQRO60306 1485 aaKnown RBP eCLIP37.43■■■■□ 3.58
SLIT3-208ENST00000521150 TARBP1Q13395 1621 aaKnown RBP37.42■■■■□ 3.58
SLIT3-208ENST00000521150 POLA1P09884 1462 aaPredicted RBP37.38■■■■□ 3.57
SLIT3-208ENST00000521150 ARHGEF11O15085 1522 aa37.34■■■■□ 3.57
SLIT3-208ENST00000521150 SOGA1O94964 1423 aa37.27■■■■□ 3.56
SLIT3-208ENST00000521150 RAD54L2Q9Y4B4 1467 aa37.26■■■■□ 3.55
SLIT3-208ENST00000521150 FBLN2P98095 1184 aa37.25■■■■□ 3.55
SLIT3-208ENST00000521150 CHD1O14646 1710 aa37.2■■■■□ 3.55
SLIT3-208ENST00000521150 TDRD9Q8NDG6 1382 aaKnown RBP37.19■■■■□ 3.54
SLIT3-208ENST00000521150 CYB5RLQ6IPT4 315 aa37.17■■■■□ 3.54
SLIT3-208ENST00000521150 FGD5Q6ZNL6 1462 aa37.12■■■■□ 3.53
SLIT3-208ENST00000521150 CUX1P39880 1505 aa37.06■■■■□ 3.52
SLIT3-208ENST00000521150 WDR97A6NE52 1622 aa37.05■■■■□ 3.52
SLIT3-208ENST00000521150 SNAPC4Q5SXM2 1469 aa36.99■■■■□ 3.51
SLIT3-208ENST00000521150 CHMP7Q8WUX9 453 aaPredicted RBP36.97■■■■□ 3.51
SLIT3-208ENST00000521150 ARAP1Q96P48 1450 aa36.96■■■■□ 3.51
SLIT3-208ENST00000521150 GRIN2BQ13224 1484 aa36.92■■■■□ 3.5
SLIT3-208ENST00000521150 MAGI1Q96QZ7 1491 aaPredicted RBP36.92■■■■□ 3.5
SLIT3-208ENST00000521150 SUPT5HO00267 1087 aaKnown RBP36.88■■■■□ 3.49
SLIT3-208ENST00000521150 CLASP1Q7Z460 1538 aa36.82■■■■□ 3.48
SLIT3-208ENST00000521150 SYNJ1O43426 1573 aa36.81■■■■□ 3.48
SLIT3-208ENST00000521150 SYNJ2O15056 1496 aa36.81■■■■□ 3.48
SLIT3-208ENST00000521150 TRHP20396 242 aaPredicted RBP36.78■■■■□ 3.48
SLIT3-208ENST00000521150 GAPVD1Q14C86 1478 aa36.77■■■■□ 3.48
SLIT3-208ENST00000521150 ABCA10Q8WWZ4 1543 aa36.72■■■■□ 3.47
SLIT3-208ENST00000521150 PBRM1Q86U86 1689 aa36.67■■■■□ 3.46
SLIT3-208ENST00000521150 ABCA5Q8WWZ7 1642 aa36.61■■■■□ 3.45
SLIT3-208ENST00000521150 WRNQ14191 1432 aaPredicted RBP eCLIP36.58■■■■□ 3.45
SLIT3-208ENST00000521150 TOP2BQ02880 1626 aa36.44■■■■□ 3.42
SLIT3-208ENST00000521150 GRIN2AQ12879 1464 aa36.43■■■■□ 3.42
SLIT3-208ENST00000521150 BIVM-ERCC5R4GMW8 1640 aa36.41■■■■□ 3.42
SLIT3-208ENST00000521150 ADAMTS12P58397 1594 aa36.33■■■■□ 3.41
SLIT3-208ENST00000521150 NUP160Q12769 1436 aa36.33■■■■□ 3.41
SLIT3-208ENST00000521150 FHAD1B1AJZ9 1412 aa36.32■■■■□ 3.4
SLIT3-208ENST00000521150 CEP170Q5SW79 1584 aa36.26■■■■□ 3.39
SLIT3-208ENST00000521150 ERICH3Q5RHP9 1530 aa36.25■■■■□ 3.39
SLIT3-208ENST00000521150 ERCC6L2Q5T890 1561 aa36.23■■■■□ 3.39
SLIT3-208ENST00000521150 SHROOM2Q13796 1616 aa36.13■■■■□ 3.37
SLIT3-208ENST00000521150 JPH4Q96JJ6 628 aa36.04■■■■□ 3.36
SLIT3-208ENST00000521150 PRG4Q92954 1404 aaPredicted RBP36■■■■□ 3.35
SLIT3-208ENST00000521150 IGF1RP08069 1367 aa35.83■■■■□ 3.33
SLIT3-208ENST00000521150 RUSC2Q8N2Y8 1516 aa35.82■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms