RNA–Protein interactions for RNA: ENST00000521130.1

SLIT3-207, Transcript of slit guidance ligand 3, humanhuman

TSL 5

Gene SLIT3, Length 972 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-207ENST00000521130 NISCHQ9Y2I1 1504 aa47.81■■■■■ 5.24
SLIT3-207ENST00000521130 CCDC180Q9P1Z9 1646 aa42.77■■■■■ 4.44
SLIT3-207ENST00000521130 ABCC9O60706 1549 aa42.76■■■■■ 4.44
SLIT3-207ENST00000521130 RB1CC1Q8TDY2 1594 aa40.72■■■■■ 4.11
SLIT3-207ENST00000521130 DCAF8L2P0C7V8 631 aa40.52■■■■■ 4.08
SLIT3-207ENST00000521130 NACADO15069 1562 aa40.46■■■■■ 4.07
SLIT3-207ENST00000521130 DNAJC5BQ9UF47 199 aa39.95■■■■□ 3.99
SLIT3-207ENST00000521130 MYO15BQ96JP2 1530 aa39.9■■■■□ 3.98
SLIT3-207ENST00000521130 PABPN1Q86U42 306 aaKnown RBP eCLIP39.89■■■■□ 3.98
SLIT3-207ENST00000521130 UNC13AQ9UPW8 1703 aa39.67■■■■□ 3.94
SLIT3-207ENST00000521130 ZCCHC6Q5VYS8 1495 aaKnown RBP39.63■■■■□ 3.94
SLIT3-207ENST00000521130 DCAF1Q9Y4B6 1507 aa39.45■■■■□ 3.91
SLIT3-207ENST00000521130 BICRAQ9NZM4 1560 aa39.45■■■■□ 3.91
SLIT3-207ENST00000521130 SCRIBQ14160 1630 aa39.07■■■■□ 3.84
SLIT3-207ENST00000521130 SHROOM4Q9ULL8 1493 aa38.97■■■■□ 3.83
SLIT3-207ENST00000521130 CC2D2AQ9P2K1 1620 aa38.57■■■■□ 3.77
SLIT3-207ENST00000521130 EIF4G1Q04637 1599 aaKnown RBP38.53■■■■□ 3.76
SLIT3-207ENST00000521130 CECR2Q9BXF3 1484 aa38.49■■■■□ 3.75
SLIT3-207ENST00000521130 NCAPD3P42695 1498 aa37.36■■■■□ 3.57
SLIT3-207ENST00000521130 ATAD2BQ9ULI0 1458 aa37.27■■■■□ 3.56
SLIT3-207ENST00000521130 SMARCA4P51532 1647 aa37.24■■■■□ 3.55
SLIT3-207ENST00000521130 SMARCA2P51531 1590 aa37.18■■■■□ 3.54
SLIT3-207ENST00000521130 BAZ1AQ9NRL2 1556 aaPredicted RBP37.12■■■■□ 3.53
SLIT3-207ENST00000521130 HMGXB3Q12766 1538 aa37.06■■■■□ 3.52
SLIT3-207ENST00000521130 BAZ1BQ9UIG0 1483 aaKnown RBP36.96■■■■□ 3.51
SLIT3-207ENST00000521130 ERCC6Q03468 1493 aa36.95■■■■□ 3.51
SLIT3-207ENST00000521130 DNAJC5Q9H3Z4 198 aa36.86■■■■□ 3.49
SLIT3-207ENST00000521130 MROH2BQ7Z745 1585 aa36.84■■■■□ 3.49
SLIT3-207ENST00000521130 PEG3Q9GZU2 1588 aa36.83■■■■□ 3.49
SLIT3-207ENST00000521130 CUX2O14529 1486 aa36.76■■■■□ 3.48
SLIT3-207ENST00000521130 NESP48681 1621 aa36.74■■■■□ 3.47
SLIT3-207ENST00000521130 LAMC3Q9Y6N6 1575 aa36.49■■■■□ 3.43
SLIT3-207ENST00000521130 WIZO95785 1651 aa36.39■■■■□ 3.42
SLIT3-207ENST00000521130 PDS5BQ9NTI5 1447 aa36.34■■■■□ 3.41
SLIT3-207ENST00000521130 CADPSQ9ULU8 1353 aa36.27■■■■□ 3.4
SLIT3-207ENST00000521130 THOC2Q8NI27 1593 aaKnown RBP36.27■■■■□ 3.4
SLIT3-207ENST00000521130 KIF21AQ7Z4S6 1674 aa36.2■■■■□ 3.39
SLIT3-207ENST00000521130 RSF1Q96T23 1441 aaPredicted RBP36.16■■■■□ 3.38
SLIT3-207ENST00000521130 MRC2Q9UBG0 1479 aa35.99■■■■□ 3.35
SLIT3-207ENST00000521130 TOP2AP11388 1531 aaKnown RBP35.96■■■■□ 3.35
SLIT3-207ENST00000521130 CEP164Q9UPV0 1460 aa35.9■■■■□ 3.34
SLIT3-207ENST00000521130 CFTRP13569 1480 aa35.86■■■■□ 3.33
SLIT3-207ENST00000521130 FANCD2Q9BXW9 1451 aa35.86■■■■□ 3.33
SLIT3-207ENST00000521130 WDR62O43379 1518 aa35.84■■■■□ 3.33
SLIT3-207ENST00000521130 CCDC88BA6NC98 1476 aa35.57■■■■□ 3.28
SLIT3-207ENST00000521130 URB2Q14146 1524 aaKnown RBP35.52■■■■□ 3.28
SLIT3-207ENST00000521130 PRDM2Q13029 1718 aa35.4■■■■□ 3.26
SLIT3-207ENST00000521130 OSCARQ8IYS5 282 aa35.2■■■■□ 3.23
SLIT3-207ENST00000521130 TRIM41Q8WV44 630 aa35.18■■■■□ 3.22
SLIT3-207ENST00000521130 TOPBP1Q92547 1522 aa35.16■■■■□ 3.22
SLIT3-207ENST00000521130 IFT140Q96RY7 1462 aa35.16■■■■□ 3.22
SLIT3-207ENST00000521130 ABCC8Q09428 1581 aa35.13■■■■□ 3.21
SLIT3-207ENST00000521130 ZNF608Q9ULD9 1512 aaPredicted RBP35.07■■■■□ 3.21
SLIT3-207ENST00000521130 DNMBPQ6XZF7 1577 aa35.04■■■■□ 3.2
SLIT3-207ENST00000521130 EIF4G3O43432 1585 aaKnown RBP34.85■■■■□ 3.17
SLIT3-207ENST00000521130 SUPT5HO00267 1087 aaKnown RBP34.82■■■■□ 3.16
SLIT3-207ENST00000521130 POLA1P09884 1462 aaPredicted RBP34.82■■■■□ 3.16
SLIT3-207ENST00000521130 AQRO60306 1485 aaKnown RBP eCLIP34.81■■■■□ 3.16
SLIT3-207ENST00000521130 TARBP1Q13395 1621 aaKnown RBP34.79■■■■□ 3.16
SLIT3-207ENST00000521130 SOGA1O94964 1423 aa34.72■■■■□ 3.15
SLIT3-207ENST00000521130 RAD54L2Q9Y4B4 1467 aa34.71■■■■□ 3.15
SLIT3-207ENST00000521130 FBLN2P98095 1184 aa34.68■■■■□ 3.14
SLIT3-207ENST00000521130 TDRD9Q8NDG6 1382 aaKnown RBP34.64■■■■□ 3.14
SLIT3-207ENST00000521130 FGD5Q6ZNL6 1462 aa34.64■■■■□ 3.14
SLIT3-207ENST00000521130 RIMBP3CA6NJZ7 1639 aa34.61■■■■□ 3.13
SLIT3-207ENST00000521130 RIMBP3BA6NNM3 1639 aa34.61■■■■□ 3.13
SLIT3-207ENST00000521130 RIMBP3Q9UFD9 1639 aa34.61■■■■□ 3.13
SLIT3-207ENST00000521130 CUX1P39880 1505 aa34.6■■■■□ 3.13
SLIT3-207ENST00000521130 CHD1O14646 1710 aa34.54■■■■□ 3.12
SLIT3-207ENST00000521130 ARHGEF11O15085 1522 aa34.54■■■■□ 3.12
SLIT3-207ENST00000521130 WDR97A6NE52 1622 aa34.46■■■■□ 3.11
SLIT3-207ENST00000521130 SNAPC4Q5SXM2 1469 aa34.45■■■■□ 3.1
SLIT3-207ENST00000521130 CHMP7Q8WUX9 453 aaPredicted RBP34.41■■■■□ 3.1
SLIT3-207ENST00000521130 CYB5RLQ6IPT4 315 aa34.39■■■■□ 3.1
SLIT3-207ENST00000521130 GRIN2BQ13224 1484 aa34.39■■■■□ 3.1
SLIT3-207ENST00000521130 MAGI1Q96QZ7 1491 aaPredicted RBP34.34■■■■□ 3.09
SLIT3-207ENST00000521130 GAPVD1Q14C86 1478 aa34.28■■■■□ 3.08
SLIT3-207ENST00000521130 SYNJ2O15056 1496 aa34.24■■■■□ 3.07
SLIT3-207ENST00000521130 ABCA10Q8WWZ4 1543 aa34.23■■■■□ 3.07
SLIT3-207ENST00000521130 SYNJ1O43426 1573 aa34.21■■■■□ 3.07
SLIT3-207ENST00000521130 ARAP1Q96P48 1450 aa34.2■■■■□ 3.07
SLIT3-207ENST00000521130 WRNQ14191 1432 aaPredicted RBP eCLIP34.19■■■■□ 3.06
SLIT3-207ENST00000521130 PBRM1Q86U86 1689 aa34.17■■■■□ 3.06
SLIT3-207ENST00000521130 CLASP1Q7Z460 1538 aa34.15■■■■□ 3.06
SLIT3-207ENST00000521130 ABCA5Q8WWZ7 1642 aa34.12■■■■□ 3.05
SLIT3-207ENST00000521130 TOP2BQ02880 1626 aa34.08■■■■□ 3.05
SLIT3-207ENST00000521130 BIVM-ERCC5R4GMW8 1640 aa34.04■■■■□ 3.04
SLIT3-207ENST00000521130 TRHP20396 242 aaPredicted RBP34.02■■■■□ 3.04
SLIT3-207ENST00000521130 GRIN2AQ12879 1464 aa33.92■■■■□ 3.02
SLIT3-207ENST00000521130 ADAMTS12P58397 1594 aa33.88■■■■□ 3.01
SLIT3-207ENST00000521130 FHAD1B1AJZ9 1412 aa33.86■■■■□ 3.01
SLIT3-207ENST00000521130 ERICH3Q5RHP9 1530 aa33.81■■■■□ 3
SLIT3-207ENST00000521130 NUP160Q12769 1436 aa33.78■■■■□ 3
SLIT3-207ENST00000521130 CEP170Q5SW79 1584 aa33.75■■■□□ 2.99
SLIT3-207ENST00000521130 ERCC6L2Q5T890 1561 aa33.65■■■□□ 2.98
SLIT3-207ENST00000521130 SHROOM2Q13796 1616 aa33.55■■■□□ 2.96
SLIT3-207ENST00000521130 JPH4Q96JJ6 628 aa33.53■■■□□ 2.96
SLIT3-207ENST00000521130 KIF27Q86VH2 1401 aa33.51■■■□□ 2.95
SLIT3-207ENST00000521130 PRG4Q92954 1404 aaPredicted RBP33.51■■■□□ 2.95
SLIT3-207ENST00000521130 IGF1RP08069 1367 aa33.45■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms