RNA–Protein interactions for RNA: ENST00000521078.1

RUNX1T1-231, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 2

Gene RUNX1T1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-231ENST00000521078 NISCHQ9Y2I1 1504 aa30.71■■■□□ 2.51
RUNX1T1-231ENST00000521078 CHIC1Q5VXU3 224 aa30.13■■■□□ 2.41
RUNX1T1-231ENST00000521078 AEBP2Q6ZN18 517 aaPredicted RBP30.07■■■□□ 2.4
RUNX1T1-231ENST00000521078 CCDC180Q9P1Z9 1646 aa27.37■■□□□ 1.97
RUNX1T1-231ENST00000521078 ABCC9O60706 1549 aa26.83■■□□□ 1.89
RUNX1T1-231ENST00000521078 PHF23Q9BUL5 403 aaPredicted RBP26.56■■□□□ 1.84
RUNX1T1-231ENST00000521078 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
RUNX1T1-231ENST00000521078 NACADO15069 1562 aa25.73■■□□□ 1.71
RUNX1T1-231ENST00000521078 DCAF8L2P0C7V8 631 aa25.7■■□□□ 1.7
RUNX1T1-231ENST00000521078 ZCCHC6Q5VYS8 1495 aaKnown RBP25.55■■□□□ 1.68
RUNX1T1-231ENST00000521078 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
RUNX1T1-231ENST00000521078 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
RUNX1T1-231ENST00000521078 DCAF1Q9Y4B6 1507 aa25.4■■□□□ 1.66
RUNX1T1-231ENST00000521078 UNC13AQ9UPW8 1703 aa25.25■■□□□ 1.63
RUNX1T1-231ENST00000521078 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
RUNX1T1-231ENST00000521078 BICRAQ9NZM4 1560 aa25■■□□□ 1.59
RUNX1T1-231ENST00000521078 SCRIBQ14160 1630 aa24.95■■□□□ 1.58
RUNX1T1-231ENST00000521078 PLPPR3Q6T4P5 718 aa24.82■■□□□ 1.56
RUNX1T1-231ENST00000521078 SHROOM4Q9ULL8 1493 aa24.71■■□□□ 1.55
RUNX1T1-231ENST00000521078 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
RUNX1T1-231ENST00000521078 EIF4G1Q04637 1599 aaKnown RBP24.35■■□□□ 1.49
RUNX1T1-231ENST00000521078 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
RUNX1T1-231ENST00000521078 CECR2Q9BXF3 1484 aa24.12■■□□□ 1.45
RUNX1T1-231ENST00000521078 SMARCA4P51532 1647 aa23.86■■□□□ 1.41
RUNX1T1-231ENST00000521078 BAZ1AQ9NRL2 1556 aaPredicted RBP23.81■■□□□ 1.4
RUNX1T1-231ENST00000521078 NCAPD3P42695 1498 aa23.73■■□□□ 1.39
RUNX1T1-231ENST00000521078 ATAD2BQ9ULI0 1458 aa23.73■■□□□ 1.39
RUNX1T1-231ENST00000521078 SMARCA2P51531 1590 aa23.72■■□□□ 1.39
RUNX1T1-231ENST00000521078 MROH2BQ7Z745 1585 aa23.66■■□□□ 1.38
RUNX1T1-231ENST00000521078 HMGXB3Q12766 1538 aa23.62■■□□□ 1.37
RUNX1T1-231ENST00000521078 PEG3Q9GZU2 1588 aa23.61■■□□□ 1.37
RUNX1T1-231ENST00000521078 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
RUNX1T1-231ENST00000521078 FOXD1Q16676 465 aa23.48■■□□□ 1.35
RUNX1T1-231ENST00000521078 WIZO95785 1651 aa23.42■■□□□ 1.34
RUNX1T1-231ENST00000521078 RSF1Q96T23 1441 aaPredicted RBP23.35■■□□□ 1.33
RUNX1T1-231ENST00000521078 ADRA2BP18089 450 aa23.2■■□□□ 1.3
RUNX1T1-231ENST00000521078 NESP48681 1621 aa23.19■■□□□ 1.3
RUNX1T1-231ENST00000521078 PPP6R1Q9UPN7 881 aa23.17■■□□□ 1.3
RUNX1T1-231ENST00000521078 TOP2AP11388 1531 aaKnown RBP23.15■■□□□ 1.3
RUNX1T1-231ENST00000521078 ERCC6Q03468 1493 aa23.14■■□□□ 1.29
RUNX1T1-231ENST00000521078 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.29
RUNX1T1-231ENST00000521078 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
RUNX1T1-231ENST00000521078 PDS5BQ9NTI5 1447 aa22.98■■□□□ 1.27
RUNX1T1-231ENST00000521078 KIF21AQ7Z4S6 1674 aa22.96■■□□□ 1.27
RUNX1T1-231ENST00000521078 CUX2O14529 1486 aa22.92■■□□□ 1.26
RUNX1T1-231ENST00000521078 CCDC88BA6NC98 1476 aa22.88■■□□□ 1.25
RUNX1T1-231ENST00000521078 CFTRP13569 1480 aa22.88■■□□□ 1.25
RUNX1T1-231ENST00000521078 THOC2Q8NI27 1593 aaKnown RBP22.87■■□□□ 1.25
RUNX1T1-231ENST00000521078 FANCD2Q9BXW9 1451 aa22.78■■□□□ 1.24
RUNX1T1-231ENST00000521078 PRDM2Q13029 1718 aa22.77■■□□□ 1.24
RUNX1T1-231ENST00000521078 CEP164Q9UPV0 1460 aa22.76■■□□□ 1.23
RUNX1T1-231ENST00000521078 MRC2Q9UBG0 1479 aa22.74■■□□□ 1.23
RUNX1T1-231ENST00000521078 SUPT5HO00267 1087 aaKnown RBP22.71■■□□□ 1.23
RUNX1T1-231ENST00000521078 WDR62O43379 1518 aa22.67■■□□□ 1.22
RUNX1T1-231ENST00000521078 URB2Q14146 1524 aaKnown RBP22.55■■□□□ 1.2
RUNX1T1-231ENST00000521078 ABCC8Q09428 1581 aa22.41■■□□□ 1.18
RUNX1T1-231ENST00000521078 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
RUNX1T1-231ENST00000521078 DNMBPQ6XZF7 1577 aa22.38■■□□□ 1.17
RUNX1T1-231ENST00000521078 PIAS4Q8N2W9 510 aaPredicted RBP22.34■■□□□ 1.17
RUNX1T1-231ENST00000521078 KCNA4P22459 653 aa22.32■■□□□ 1.16
RUNX1T1-231ENST00000521078 DNAJC5Q9H3Z4 198 aa22.31■■□□□ 1.16
RUNX1T1-231ENST00000521078 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
RUNX1T1-231ENST00000521078 POLA1P09884 1462 aaPredicted RBP22.21■■□□□ 1.15
RUNX1T1-231ENST00000521078 CUX1P39880 1505 aa22.21■■□□□ 1.15
RUNX1T1-231ENST00000521078 TARBP1Q13395 1621 aaKnown RBP22.18■■□□□ 1.14
RUNX1T1-231ENST00000521078 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
RUNX1T1-231ENST00000521078 FGD5Q6ZNL6 1462 aa22.14■■□□□ 1.13
RUNX1T1-231ENST00000521078 SOGA1O94964 1423 aa22.12■■□□□ 1.13
RUNX1T1-231ENST00000521078 RAD54L2Q9Y4B4 1467 aa22.11■■□□□ 1.13
RUNX1T1-231ENST00000521078 EIF4G3O43432 1585 aaKnown RBP22.11■■□□□ 1.13
RUNX1T1-231ENST00000521078 AQRO60306 1485 aaKnown RBP eCLIP22.05■■□□□ 1.12
RUNX1T1-231ENST00000521078 WRNQ14191 1432 aaPredicted RBP eCLIP22.03■■□□□ 1.12
RUNX1T1-231ENST00000521078 BIVM-ERCC5R4GMW8 1640 aa22.01■■□□□ 1.11
RUNX1T1-231ENST00000521078 WDR97A6NE52 1622 aa22■■□□□ 1.11
RUNX1T1-231ENST00000521078 TOP2BQ02880 1626 aa22■■□□□ 1.11
RUNX1T1-231ENST00000521078 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
RUNX1T1-231ENST00000521078 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
RUNX1T1-231ENST00000521078 OSCARQ8IYS5 282 aa21.96■■□□□ 1.11
RUNX1T1-231ENST00000521078 PPP4R3CPQ6ZMV5 832 aa21.95■■□□□ 1.1
RUNX1T1-231ENST00000521078 ABCA10Q8WWZ4 1543 aa21.92■■□□□ 1.1
RUNX1T1-231ENST00000521078 CHD1O14646 1710 aa21.88■■□□□ 1.09
RUNX1T1-231ENST00000521078 GRIN2BQ13224 1484 aa21.87■■□□□ 1.09
RUNX1T1-231ENST00000521078 GAPVD1Q14C86 1478 aa21.87■■□□□ 1.09
RUNX1T1-231ENST00000521078 PBRM1Q86U86 1689 aa21.86■■□□□ 1.09
RUNX1T1-231ENST00000521078 SNAPC4Q5SXM2 1469 aa21.85■■□□□ 1.09
RUNX1T1-231ENST00000521078 ABCA5Q8WWZ7 1642 aa21.85■■□□□ 1.09
RUNX1T1-231ENST00000521078 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.08
RUNX1T1-231ENST00000521078 FBLN2P98095 1184 aa21.82■■□□□ 1.08
RUNX1T1-231ENST00000521078 CHMP7Q8WUX9 453 aaPredicted RBP21.74■■□□□ 1.07
RUNX1T1-231ENST00000521078 SYNJ2O15056 1496 aa21.73■■□□□ 1.07
RUNX1T1-231ENST00000521078 EHMT2Q96KQ7 1210 aa21.68■■□□□ 1.06
RUNX1T1-231ENST00000521078 ERICH3Q5RHP9 1530 aa21.67■■□□□ 1.06
RUNX1T1-231ENST00000521078 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
RUNX1T1-231ENST00000521078 RIMBP3CA6NJZ7 1639 aa21.63■■□□□ 1.05
RUNX1T1-231ENST00000521078 RIMBP3BA6NNM3 1639 aa21.63■■□□□ 1.05
RUNX1T1-231ENST00000521078 RIMBP3Q9UFD9 1639 aa21.63■■□□□ 1.05
RUNX1T1-231ENST00000521078 NCBP3Q53F19 620 aaKnown RBP21.62■■□□□ 1.05
RUNX1T1-231ENST00000521078 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
RUNX1T1-231ENST00000521078 CLASP1Q7Z460 1538 aa21.6■■□□□ 1.05
RUNX1T1-231ENST00000521078 FHAD1B1AJZ9 1412 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms