RNA–Protein interactions for RNA: ENST00000521046.1

PCMTD1-205, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 2

Gene PCMTD1, Length 856 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-205ENST00000521046 NISCHQ9Y2I1 1504 aa43.34■■■■■ 4.53
PCMTD1-205ENST00000521046 CCDC180Q9P1Z9 1646 aa38.52■■■■□ 3.76
PCMTD1-205ENST00000521046 ABCC9O60706 1549 aa37.75■■■■□ 3.63
PCMTD1-205ENST00000521046 RB1CC1Q8TDY2 1594 aa36.32■■■■□ 3.4
PCMTD1-205ENST00000521046 NACADO15069 1562 aa36.29■■■■□ 3.4
PCMTD1-205ENST00000521046 DCAF8L2P0C7V8 631 aa36.2■■■■□ 3.39
PCMTD1-205ENST00000521046 MYO15BQ96JP2 1530 aa36.11■■■■□ 3.37
PCMTD1-205ENST00000521046 ZCCHC6Q5VYS8 1495 aaKnown RBP36.08■■■■□ 3.37
PCMTD1-205ENST00000521046 DCAF1Q9Y4B6 1507 aa35.91■■■■□ 3.34
PCMTD1-205ENST00000521046 UNC13AQ9UPW8 1703 aa35.4■■■■□ 3.26
PCMTD1-205ENST00000521046 PABPN1Q86U42 306 aaKnown RBP eCLIP35.29■■■■□ 3.24
PCMTD1-205ENST00000521046 BICRAQ9NZM4 1560 aa35.21■■■■□ 3.23
PCMTD1-205ENST00000521046 SCRIBQ14160 1630 aa35.09■■■■□ 3.21
PCMTD1-205ENST00000521046 SHROOM4Q9ULL8 1493 aa34.91■■■■□ 3.18
PCMTD1-205ENST00000521046 DNAJC5BQ9UF47 199 aa34.78■■■■□ 3.16
PCMTD1-205ENST00000521046 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
PCMTD1-205ENST00000521046 CC2D2AQ9P2K1 1620 aa34.15■■■■□ 3.06
PCMTD1-205ENST00000521046 CECR2Q9BXF3 1484 aa33.96■■■■□ 3.03
PCMTD1-205ENST00000521046 SMARCA4P51532 1647 aa33.61■■■□□ 2.97
PCMTD1-205ENST00000521046 BAZ1AQ9NRL2 1556 aaPredicted RBP33.59■■■□□ 2.97
PCMTD1-205ENST00000521046 NCAPD3P42695 1498 aa33.52■■■□□ 2.96
PCMTD1-205ENST00000521046 ATAD2BQ9ULI0 1458 aa33.49■■■□□ 2.95
PCMTD1-205ENST00000521046 SMARCA2P51531 1590 aa33.44■■■□□ 2.94
PCMTD1-205ENST00000521046 MROH2BQ7Z745 1585 aa33.37■■■□□ 2.93
PCMTD1-205ENST00000521046 PEG3Q9GZU2 1588 aa33.34■■■□□ 2.93
PCMTD1-205ENST00000521046 HMGXB3Q12766 1538 aa33.3■■■□□ 2.92
PCMTD1-205ENST00000521046 BAZ1BQ9UIG0 1483 aaKnown RBP33.18■■■□□ 2.9
PCMTD1-205ENST00000521046 RSF1Q96T23 1441 aaPredicted RBP33.01■■■□□ 2.87
PCMTD1-205ENST00000521046 WIZO95785 1651 aa32.96■■■□□ 2.87
PCMTD1-205ENST00000521046 TOP2AP11388 1531 aaKnown RBP32.66■■■□□ 2.82
PCMTD1-205ENST00000521046 NESP48681 1621 aa32.65■■■□□ 2.82
PCMTD1-205ENST00000521046 LAMC3Q9Y6N6 1575 aa32.59■■■□□ 2.81
PCMTD1-205ENST00000521046 ERCC6Q03468 1493 aa32.55■■■□□ 2.8
PCMTD1-205ENST00000521046 CADPSQ9ULU8 1353 aa32.53■■■□□ 2.8
PCMTD1-205ENST00000521046 PDS5BQ9NTI5 1447 aa32.42■■■□□ 2.78
PCMTD1-205ENST00000521046 CFTRP13569 1480 aa32.31■■■□□ 2.76
PCMTD1-205ENST00000521046 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
PCMTD1-205ENST00000521046 CUX2O14529 1486 aa32.29■■■□□ 2.76
PCMTD1-205ENST00000521046 KIF21AQ7Z4S6 1674 aa32.21■■■□□ 2.75
PCMTD1-205ENST00000521046 THOC2Q8NI27 1593 aaKnown RBP32.16■■■□□ 2.74
PCMTD1-205ENST00000521046 FANCD2Q9BXW9 1451 aa32.11■■■□□ 2.73
PCMTD1-205ENST00000521046 CEP164Q9UPV0 1460 aa32.07■■■□□ 2.72
PCMTD1-205ENST00000521046 SUPT5HO00267 1087 aaKnown RBP32.06■■■□□ 2.72
PCMTD1-205ENST00000521046 MRC2Q9UBG0 1479 aa32.04■■■□□ 2.72
PCMTD1-205ENST00000521046 PRDM2Q13029 1718 aa31.94■■■□□ 2.7
PCMTD1-205ENST00000521046 WDR62O43379 1518 aa31.94■■■□□ 2.7
PCMTD1-205ENST00000521046 URB2Q14146 1524 aaKnown RBP31.79■■■□□ 2.68
PCMTD1-205ENST00000521046 ABCC8Q09428 1581 aa31.64■■■□□ 2.65
PCMTD1-205ENST00000521046 TOPBP1Q92547 1522 aa31.59■■■□□ 2.65
PCMTD1-205ENST00000521046 DNMBPQ6XZF7 1577 aa31.53■■■□□ 2.64
PCMTD1-205ENST00000521046 DNAJC5Q9H3Z4 198 aa31.43■■■□□ 2.62
PCMTD1-205ENST00000521046 IFT140Q96RY7 1462 aa31.43■■■□□ 2.62
PCMTD1-205ENST00000521046 POLA1P09884 1462 aaPredicted RBP31.32■■■□□ 2.6
PCMTD1-205ENST00000521046 CUX1P39880 1505 aa31.31■■■□□ 2.6
PCMTD1-205ENST00000521046 ZNF608Q9ULD9 1512 aaPredicted RBP31.25■■■□□ 2.59
PCMTD1-205ENST00000521046 TARBP1Q13395 1621 aaKnown RBP31.24■■■□□ 2.59
PCMTD1-205ENST00000521046 FGD5Q6ZNL6 1462 aa31.21■■■□□ 2.59
PCMTD1-205ENST00000521046 SOGA1O94964 1423 aa31.21■■■□□ 2.59
PCMTD1-205ENST00000521046 RAD54L2Q9Y4B4 1467 aa31.16■■■□□ 2.58
PCMTD1-205ENST00000521046 WRNQ14191 1432 aaPredicted RBP eCLIP31.1■■■□□ 2.57
PCMTD1-205ENST00000521046 EIF4G3O43432 1585 aaKnown RBP31.09■■■□□ 2.57
PCMTD1-205ENST00000521046 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.57
PCMTD1-205ENST00000521046 TDRD9Q8NDG6 1382 aaKnown RBP31.03■■■□□ 2.56
PCMTD1-205ENST00000521046 WDR97A6NE52 1622 aa31.02■■■□□ 2.56
PCMTD1-205ENST00000521046 TOP2BQ02880 1626 aa31.02■■■□□ 2.56
PCMTD1-205ENST00000521046 BIVM-ERCC5R4GMW8 1640 aa31■■■□□ 2.55
PCMTD1-205ENST00000521046 SYNJ1O43426 1573 aa30.98■■■□□ 2.55
PCMTD1-205ENST00000521046 OSCARQ8IYS5 282 aa30.97■■■□□ 2.55
PCMTD1-205ENST00000521046 ABCA10Q8WWZ4 1543 aa30.94■■■□□ 2.54
PCMTD1-205ENST00000521046 GRIN2BQ13224 1484 aa30.85■■■□□ 2.53
PCMTD1-205ENST00000521046 GAPVD1Q14C86 1478 aa30.83■■■□□ 2.53
PCMTD1-205ENST00000521046 MAGI1Q96QZ7 1491 aaPredicted RBP30.78■■■□□ 2.52
PCMTD1-205ENST00000521046 ABCA5Q8WWZ7 1642 aa30.78■■■□□ 2.52
PCMTD1-205ENST00000521046 SNAPC4Q5SXM2 1469 aa30.77■■■□□ 2.52
PCMTD1-205ENST00000521046 FBLN2P98095 1184 aa30.71■■■□□ 2.51
PCMTD1-205ENST00000521046 CHD1O14646 1710 aa30.68■■■□□ 2.5
PCMTD1-205ENST00000521046 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
PCMTD1-205ENST00000521046 CHMP7Q8WUX9 453 aaPredicted RBP30.67■■■□□ 2.5
PCMTD1-205ENST00000521046 SYNJ2O15056 1496 aa30.65■■■□□ 2.5
PCMTD1-205ENST00000521046 ERICH3Q5RHP9 1530 aa30.57■■■□□ 2.49
PCMTD1-205ENST00000521046 FHAD1B1AJZ9 1412 aa30.49■■■□□ 2.47
PCMTD1-205ENST00000521046 ADAMTS12P58397 1594 aa30.48■■■□□ 2.47
PCMTD1-205ENST00000521046 KIF27Q86VH2 1401 aa30.47■■■□□ 2.47
PCMTD1-205ENST00000521046 GRIN2AQ12879 1464 aa30.44■■■□□ 2.46
PCMTD1-205ENST00000521046 CLASP1Q7Z460 1538 aa30.43■■■□□ 2.46
PCMTD1-205ENST00000521046 ARHGEF11O15085 1522 aa30.4■■■□□ 2.46
PCMTD1-205ENST00000521046 IGF1RP08069 1367 aa30.4■■■□□ 2.46
PCMTD1-205ENST00000521046 RIMBP3CA6NJZ7 1639 aa30.38■■■□□ 2.45
PCMTD1-205ENST00000521046 RIMBP3BA6NNM3 1639 aa30.38■■■□□ 2.45
PCMTD1-205ENST00000521046 RIMBP3Q9UFD9 1639 aa30.38■■■□□ 2.45
PCMTD1-205ENST00000521046 NUP160Q12769 1436 aa30.33■■■□□ 2.45
PCMTD1-205ENST00000521046 TRIM41Q8WV44 630 aa30.33■■■□□ 2.45
PCMTD1-205ENST00000521046 CEP170Q5SW79 1584 aa30.25■■■□□ 2.43
PCMTD1-205ENST00000521046 CUL7Q14999 1698 aa30.23■■■□□ 2.43
PCMTD1-205ENST00000521046 CARMIL1Q5VZK9 1371 aa30.19■■■□□ 2.42
PCMTD1-205ENST00000521046 ARAP1Q96P48 1450 aa30.15■■■□□ 2.42
PCMTD1-205ENST00000521046 CYB5RLQ6IPT4 315 aa30.15■■■□□ 2.42
PCMTD1-205ENST00000521046 RUSC2Q8N2Y8 1516 aa30.12■■■□□ 2.41
PCMTD1-205ENST00000521046 SHROOM2Q13796 1616 aa30.07■■■□□ 2.4
PCMTD1-205ENST00000521046 JPH4Q96JJ6 628 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms