RNA–Protein interactions for RNA: ENST00000521018.1

MTCL1-211, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 4

Gene MTCL1, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-211ENST00000521018 NISCHQ9Y2I1 1504 aa41.24■■■■■ 4.19
MTCL1-211ENST00000521018 CCDC180Q9P1Z9 1646 aa36.96■■■■□ 3.51
MTCL1-211ENST00000521018 ABCC9O60706 1549 aa36.57■■■■□ 3.44
MTCL1-211ENST00000521018 RB1CC1Q8TDY2 1594 aa34.96■■■■□ 3.19
MTCL1-211ENST00000521018 NACADO15069 1562 aa34.8■■■■□ 3.16
MTCL1-211ENST00000521018 MYO15BQ96JP2 1530 aa34.45■■■■□ 3.1
MTCL1-211ENST00000521018 DCAF8L2P0C7V8 631 aa34.43■■■■□ 3.1
MTCL1-211ENST00000521018 UNC13AQ9UPW8 1703 aa34.36■■■■□ 3.09
MTCL1-211ENST00000521018 ZCCHC6Q5VYS8 1495 aaKnown RBP34.26■■■■□ 3.07
MTCL1-211ENST00000521018 DNAJC5BQ9UF47 199 aa34.12■■■■□ 3.05
MTCL1-211ENST00000521018 DCAF1Q9Y4B6 1507 aa34.11■■■■□ 3.05
MTCL1-211ENST00000521018 BICRAQ9NZM4 1560 aa34.06■■■■□ 3.04
MTCL1-211ENST00000521018 PABPN1Q86U42 306 aaKnown RBP eCLIP34.03■■■■□ 3.04
MTCL1-211ENST00000521018 SCRIBQ14160 1630 aa33.62■■■□□ 2.97
MTCL1-211ENST00000521018 SHROOM4Q9ULL8 1493 aa33.52■■■□□ 2.96
MTCL1-211ENST00000521018 CC2D2AQ9P2K1 1620 aa33.13■■■□□ 2.89
MTCL1-211ENST00000521018 EIF4G1Q04637 1599 aaKnown RBP33.12■■■□□ 2.89
MTCL1-211ENST00000521018 CECR2Q9BXF3 1484 aa32.91■■■□□ 2.86
MTCL1-211ENST00000521018 SMARCA4P51532 1647 aa32.15■■■□□ 2.74
MTCL1-211ENST00000521018 NCAPD3P42695 1498 aa32.12■■■□□ 2.73
MTCL1-211ENST00000521018 ATAD2BQ9ULI0 1458 aa32.06■■■□□ 2.72
MTCL1-211ENST00000521018 SMARCA2P51531 1590 aa31.97■■■□□ 2.71
MTCL1-211ENST00000521018 BAZ1AQ9NRL2 1556 aaPredicted RBP31.97■■■□□ 2.71
MTCL1-211ENST00000521018 HMGXB3Q12766 1538 aa31.94■■■□□ 2.7
MTCL1-211ENST00000521018 PEG3Q9GZU2 1588 aa31.87■■■□□ 2.69
MTCL1-211ENST00000521018 MROH2BQ7Z745 1585 aa31.79■■■□□ 2.68
MTCL1-211ENST00000521018 BAZ1BQ9UIG0 1483 aaKnown RBP31.72■■■□□ 2.67
MTCL1-211ENST00000521018 NESP48681 1621 aa31.55■■■□□ 2.64
MTCL1-211ENST00000521018 ERCC6Q03468 1493 aa31.48■■■□□ 2.63
MTCL1-211ENST00000521018 WIZO95785 1651 aa31.45■■■□□ 2.63
MTCL1-211ENST00000521018 CUX2O14529 1486 aa31.42■■■□□ 2.62
MTCL1-211ENST00000521018 LAMC3Q9Y6N6 1575 aa31.37■■■□□ 2.61
MTCL1-211ENST00000521018 THOC2Q8NI27 1593 aaKnown RBP31.25■■■□□ 2.59
MTCL1-211ENST00000521018 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
MTCL1-211ENST00000521018 RSF1Q96T23 1441 aaPredicted RBP31.19■■■□□ 2.58
MTCL1-211ENST00000521018 CADPSQ9ULU8 1353 aa31.1■■■□□ 2.57
MTCL1-211ENST00000521018 PDS5BQ9NTI5 1447 aa31.07■■■□□ 2.57
MTCL1-211ENST00000521018 DNAJC5Q9H3Z4 198 aa31.06■■■□□ 2.56
MTCL1-211ENST00000521018 TOP2AP11388 1531 aaKnown RBP31.03■■■□□ 2.56
MTCL1-211ENST00000521018 CFTRP13569 1480 aa30.86■■■□□ 2.53
MTCL1-211ENST00000521018 MRC2Q9UBG0 1479 aa30.85■■■□□ 2.53
MTCL1-211ENST00000521018 WDR62O43379 1518 aa30.83■■■□□ 2.53
MTCL1-211ENST00000521018 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.52
MTCL1-211ENST00000521018 CEP164Q9UPV0 1460 aa30.76■■■□□ 2.52
MTCL1-211ENST00000521018 PRDM2Q13029 1718 aa30.7■■■□□ 2.51
MTCL1-211ENST00000521018 CCDC88BA6NC98 1476 aa30.66■■■□□ 2.5
MTCL1-211ENST00000521018 URB2Q14146 1524 aaKnown RBP30.56■■■□□ 2.48
MTCL1-211ENST00000521018 TOPBP1Q92547 1522 aa30.25■■■□□ 2.43
MTCL1-211ENST00000521018 DNMBPQ6XZF7 1577 aa30.17■■■□□ 2.42
MTCL1-211ENST00000521018 SUPT5HO00267 1087 aaKnown RBP30.16■■■□□ 2.42
MTCL1-211ENST00000521018 ABCC8Q09428 1581 aa30.14■■■□□ 2.42
MTCL1-211ENST00000521018 IFT140Q96RY7 1462 aa30.13■■■□□ 2.41
MTCL1-211ENST00000521018 ZNF608Q9ULD9 1512 aaPredicted RBP30.12■■■□□ 2.41
MTCL1-211ENST00000521018 TARBP1Q13395 1621 aaKnown RBP30.04■■■□□ 2.4
MTCL1-211ENST00000521018 EIF4G3O43432 1585 aaKnown RBP30■■■□□ 2.39
MTCL1-211ENST00000521018 POLA1P09884 1462 aaPredicted RBP29.95■■■□□ 2.39
MTCL1-211ENST00000521018 OSCARQ8IYS5 282 aa29.92■■■□□ 2.38
MTCL1-211ENST00000521018 CUX1P39880 1505 aa29.86■■■□□ 2.37
MTCL1-211ENST00000521018 AQRO60306 1485 aaKnown RBP eCLIP29.84■■■□□ 2.374e-8■■■■□ 22.5
MTCL1-211ENST00000521018 RAD54L2Q9Y4B4 1467 aa29.82■■■□□ 2.36
MTCL1-211ENST00000521018 FGD5Q6ZNL6 1462 aa29.8■■■□□ 2.36
MTCL1-211ENST00000521018 CHD1O14646 1710 aa29.76■■■□□ 2.36
MTCL1-211ENST00000521018 SOGA1O94964 1423 aa29.75■■■□□ 2.35
MTCL1-211ENST00000521018 TRIM41Q8WV44 630 aa29.71■■■□□ 2.35
MTCL1-211ENST00000521018 WDR97A6NE52 1622 aa29.71■■■□□ 2.35
MTCL1-211ENST00000521018 RIMBP3CA6NJZ7 1639 aa29.67■■■□□ 2.34
MTCL1-211ENST00000521018 RIMBP3BA6NNM3 1639 aa29.67■■■□□ 2.34
MTCL1-211ENST00000521018 RIMBP3Q9UFD9 1639 aa29.67■■■□□ 2.34
MTCL1-211ENST00000521018 TDRD9Q8NDG6 1382 aaKnown RBP29.66■■■□□ 2.34
MTCL1-211ENST00000521018 ARHGEF11O15085 1522 aa29.57■■■□□ 2.32
MTCL1-211ENST00000521018 SNAPC4Q5SXM2 1469 aa29.55■■■□□ 2.32
MTCL1-211ENST00000521018 PBRM1Q86U86 1689 aa29.52■■■□□ 2.32
MTCL1-211ENST00000521018 ABCA5Q8WWZ7 1642 aa29.49■■■□□ 2.31
MTCL1-211ENST00000521018 BIVM-ERCC5R4GMW8 1640 aa29.49■■■□□ 2.31
MTCL1-211ENST00000521018 ABCA10Q8WWZ4 1543 aa29.49■■■□□ 2.31
MTCL1-211ENST00000521018 GRIN2BQ13224 1484 aa29.48■■■□□ 2.31
MTCL1-211ENST00000521018 MAGI1Q96QZ7 1491 aaPredicted RBP29.48■■■□□ 2.31
MTCL1-211ENST00000521018 TOP2BQ02880 1626 aa29.45■■■□□ 2.31
MTCL1-211ENST00000521018 SYNJ1O43426 1573 aa29.45■■■□□ 2.31
MTCL1-211ENST00000521018 FBLN2P98095 1184 aa29.43■■■□□ 2.3
MTCL1-211ENST00000521018 GAPVD1Q14C86 1478 aa29.42■■■□□ 2.3
MTCL1-211ENST00000521018 CLASP1Q7Z460 1538 aa29.41■■■□□ 2.3
MTCL1-211ENST00000521018 SYNJ2O15056 1496 aa29.38■■■□□ 2.29
MTCL1-211ENST00000521018 WRNQ14191 1432 aaPredicted RBP eCLIP29.37■■■□□ 2.29
MTCL1-211ENST00000521018 ARAP1Q96P48 1450 aa29.31■■■□□ 2.28
MTCL1-211ENST00000521018 CHMP7Q8WUX9 453 aaPredicted RBP29.29■■■□□ 2.28
MTCL1-211ENST00000521018 ADAMTS12P58397 1594 aa29.22■■■□□ 2.27
MTCL1-211ENST00000521018 CYB5RLQ6IPT4 315 aa29.2■■■□□ 2.26
MTCL1-211ENST00000521018 GRIN2AQ12879 1464 aa29.14■■■□□ 2.26
MTCL1-211ENST00000521018 ERICH3Q5RHP9 1530 aa29.12■■■□□ 2.25
MTCL1-211ENST00000521018 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
MTCL1-211ENST00000521018 NUP160Q12769 1436 aa29.05■■■□□ 2.24
MTCL1-211ENST00000521018 FHAD1B1AJZ9 1412 aa29.04■■■□□ 2.24
MTCL1-211ENST00000521018 ERCC6L2Q5T890 1561 aa28.98■■■□□ 2.23
MTCL1-211ENST00000521018 SHROOM2Q13796 1616 aa28.98■■■□□ 2.23
MTCL1-211ENST00000521018 RUSC2Q8N2Y8 1516 aa28.81■■■□□ 2.2
MTCL1-211ENST00000521018 IGF1RP08069 1367 aa28.77■■■□□ 2.2
MTCL1-211ENST00000521018 CUL7Q14999 1698 aa28.77■■■□□ 2.2
MTCL1-211ENST00000521018 KIF27Q86VH2 1401 aa28.77■■■□□ 2.2
MTCL1-211ENST00000521018 TRHP20396 242 aaPredicted RBP28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms