RNA–Protein interactions for RNA: ENST00000521009.5

GABRP-208, Transcript of gamma-aminobutyric acid type A receptor pi subunit, humanhuman

TSL 4

Gene GABRP, Length 456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRP-208ENST00000521009 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
GABRP-208ENST00000521009 CCDC180Q9P1Z9 1646 aa20.59■□□□□ 0.89
GABRP-208ENST00000521009 ABCC9O60706 1549 aa20.24■□□□□ 0.83
GABRP-208ENST00000521009 RB1CC1Q8TDY2 1594 aa19.46■□□□□ 0.71
GABRP-208ENST00000521009 NACADO15069 1562 aa19.39■□□□□ 0.69
GABRP-208ENST00000521009 MYO15BQ96JP2 1530 aa19.26■□□□□ 0.67
GABRP-208ENST00000521009 ZCCHC6Q5VYS8 1495 aaKnown RBP19.06■□□□□ 0.64
GABRP-208ENST00000521009 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
GABRP-208ENST00000521009 UNC13AQ9UPW8 1703 aa19.01■□□□□ 0.63
GABRP-208ENST00000521009 DCAF8L2P0C7V8 631 aa18.98■□□□□ 0.63
GABRP-208ENST00000521009 BICRAQ9NZM4 1560 aa18.88■□□□□ 0.61
GABRP-208ENST00000521009 DNAJC5BQ9UF47 199 aa18.81■□□□□ 0.6
GABRP-208ENST00000521009 SHROOM4Q9ULL8 1493 aa18.78■□□□□ 0.6
GABRP-208ENST00000521009 PABPN1Q86U42 306 aaKnown RBP eCLIP18.78■□□□□ 0.6
GABRP-208ENST00000521009 SCRIBQ14160 1630 aa18.61■□□□□ 0.57
GABRP-208ENST00000521009 EIF4G1Q04637 1599 aaKnown RBP18.39■□□□□ 0.53
GABRP-208ENST00000521009 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
GABRP-208ENST00000521009 CECR2Q9BXF3 1484 aa18.27■□□□□ 0.52
GABRP-208ENST00000521009 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
GABRP-208ENST00000521009 SMARCA4P51532 1647 aa17.85■□□□□ 0.45
GABRP-208ENST00000521009 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
GABRP-208ENST00000521009 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
GABRP-208ENST00000521009 ATAD2BQ9ULI0 1458 aa17.81■□□□□ 0.44
GABRP-208ENST00000521009 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
GABRP-208ENST00000521009 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
GABRP-208ENST00000521009 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
GABRP-208ENST00000521009 MROH2BQ7Z745 1585 aa17.61■□□□□ 0.41
GABRP-208ENST00000521009 CUX2O14529 1486 aa17.52■□□□□ 0.4
GABRP-208ENST00000521009 ERCC6Q03468 1493 aa17.49■□□□□ 0.39
GABRP-208ENST00000521009 LAMC3Q9Y6N6 1575 aa17.47■□□□□ 0.39
GABRP-208ENST00000521009 NESP48681 1621 aa17.43■□□□□ 0.38
GABRP-208ENST00000521009 WIZO95785 1651 aa17.39■□□□□ 0.37
GABRP-208ENST00000521009 THOC2Q8NI27 1593 aaKnown RBP17.35■□□□□ 0.37
GABRP-208ENST00000521009 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
GABRP-208ENST00000521009 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
GABRP-208ENST00000521009 CADPSQ9ULU8 1353 aa17.29■□□□□ 0.36
GABRP-208ENST00000521009 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
GABRP-208ENST00000521009 TOP2AP11388 1531 aaKnown RBP17.26■□□□□ 0.35
GABRP-208ENST00000521009 DNAJC5Q9H3Z4 198 aa17.23■□□□□ 0.35
GABRP-208ENST00000521009 CFTRP13569 1480 aa17.17■□□□□ 0.34
GABRP-208ENST00000521009 MRC2Q9UBG0 1479 aa17.16■□□□□ 0.34
GABRP-208ENST00000521009 WDR62O43379 1518 aa17.16■□□□□ 0.34
GABRP-208ENST00000521009 CEP164Q9UPV0 1460 aa17.11■□□□□ 0.33
GABRP-208ENST00000521009 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
GABRP-208ENST00000521009 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
GABRP-208ENST00000521009 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
GABRP-208ENST00000521009 URB2Q14146 1524 aaKnown RBP16.94■□□□□ 0.3
GABRP-208ENST00000521009 ABCC8Q09428 1581 aa16.82■□□□□ 0.28
GABRP-208ENST00000521009 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
GABRP-208ENST00000521009 DNMBPQ6XZF7 1577 aa16.78■□□□□ 0.28
GABRP-208ENST00000521009 IFT140Q96RY7 1462 aa16.78■□□□□ 0.28
GABRP-208ENST00000521009 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
GABRP-208ENST00000521009 ZNF608Q9ULD9 1512 aaPredicted RBP16.67■□□□□ 0.26
GABRP-208ENST00000521009 EIF4G3O43432 1585 aaKnown RBP16.66■□□□□ 0.26
GABRP-208ENST00000521009 POLA1P09884 1462 aaPredicted RBP16.64■□□□□ 0.25
GABRP-208ENST00000521009 WDR97A6NE52 1622 aa16.61■□□□□ 0.25
GABRP-208ENST00000521009 OSCARQ8IYS5 282 aa16.61■□□□□ 0.25
GABRP-208ENST00000521009 CUX1P39880 1505 aa16.55■□□□□ 0.24
GABRP-208ENST00000521009 FGD5Q6ZNL6 1462 aa16.53■□□□□ 0.24
GABRP-208ENST00000521009 AQRO60306 1485 aaKnown RBP eCLIP16.51■□□□□ 0.23
GABRP-208ENST00000521009 SOGA1O94964 1423 aa16.51■□□□□ 0.23
GABRP-208ENST00000521009 RAD54L2Q9Y4B4 1467 aa16.49■□□□□ 0.23
GABRP-208ENST00000521009 CHD1O14646 1710 aa16.48■□□□□ 0.23
GABRP-208ENST00000521009 SUPT5HO00267 1087 aaKnown RBP16.45■□□□□ 0.22
GABRP-208ENST00000521009 RIMBP3CA6NJZ7 1639 aa16.45■□□□□ 0.22
GABRP-208ENST00000521009 RIMBP3BA6NNM3 1639 aa16.45■□□□□ 0.22
GABRP-208ENST00000521009 RIMBP3Q9UFD9 1639 aa16.45■□□□□ 0.22
GABRP-208ENST00000521009 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
GABRP-208ENST00000521009 ARHGEF11O15085 1522 aa16.42■□□□□ 0.22
GABRP-208ENST00000521009 TDRD9Q8NDG6 1382 aaKnown RBP16.41■□□□□ 0.22
GABRP-208ENST00000521009 ABCA10Q8WWZ4 1543 aa16.41■□□□□ 0.22
GABRP-208ENST00000521009 GRIN2BQ13224 1484 aa16.41■□□□□ 0.22
GABRP-208ENST00000521009 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.21
GABRP-208ENST00000521009 TRIM41Q8WV44 630 aa16.39■□□□□ 0.21
GABRP-208ENST00000521009 SNAPC4Q5SXM2 1469 aa16.39■□□□□ 0.21
GABRP-208ENST00000521009 ABCA5Q8WWZ7 1642 aa16.38■□□□□ 0.21
GABRP-208ENST00000521009 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
GABRP-208ENST00000521009 PBRM1Q86U86 1689 aa16.37■□□□□ 0.21
GABRP-208ENST00000521009 SYNJ2O15056 1496 aa16.35■□□□□ 0.21
GABRP-208ENST00000521009 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
GABRP-208ENST00000521009 CLASP1Q7Z460 1538 aa16.35■□□□□ 0.21
GABRP-208ENST00000521009 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.2
GABRP-208ENST00000521009 SYNJ1O43426 1573 aa16.33■□□□□ 0.2
GABRP-208ENST00000521009 FBLN2P98095 1184 aa16.27■□□□□ 0.2
GABRP-208ENST00000521009 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
GABRP-208ENST00000521009 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
GABRP-208ENST00000521009 ADAMTS12P58397 1594 aa16.23■□□□□ 0.19
GABRP-208ENST00000521009 ERICH3Q5RHP9 1530 aa16.22■□□□□ 0.19
GABRP-208ENST00000521009 GRIN2AQ12879 1464 aa16.2■□□□□ 0.18
GABRP-208ENST00000521009 FHAD1B1AJZ9 1412 aa16.17■□□□□ 0.18
GABRP-208ENST00000521009 NUP160Q12769 1436 aa16.17■□□□□ 0.18
GABRP-208ENST00000521009 CYB5RLQ6IPT4 315 aa16.15■□□□□ 0.18
GABRP-208ENST00000521009 CEP170Q5SW79 1584 aa16.13■□□□□ 0.17
GABRP-208ENST00000521009 SHROOM2Q13796 1616 aa16.11■□□□□ 0.17
GABRP-208ENST00000521009 RUSC2Q8N2Y8 1516 aa16.02■□□□□ 0.15
GABRP-208ENST00000521009 CUL7Q14999 1698 aa16.02■□□□□ 0.15
GABRP-208ENST00000521009 KIF27Q86VH2 1401 aa16.01■□□□□ 0.15
GABRP-208ENST00000521009 ERCC6L2Q5T890 1561 aa16■□□□□ 0.15
GABRP-208ENST00000521009 IGF1RP08069 1367 aa15.96■□□□□ 0.15
GABRP-208ENST00000521009 KIAA0586Q9BVV6 1533 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms