RNA–Protein interactions for RNA: ENST00000520997.1

VPS37A-207, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 627 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-207ENST00000520997 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
VPS37A-207ENST00000520997 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
VPS37A-207ENST00000520997 NISCHQ9Y2I1 1504 aa16.61■□□□□ 0.25
VPS37A-207ENST00000520997 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
VPS37A-207ENST00000520997 PHF23Q9BUL5 403 aaPredicted RBP15.98■□□□□ 0.15
VPS37A-207ENST00000520997 ABCC9O60706 1549 aa15.68■□□□□ 0.1
VPS37A-207ENST00000520997 CCDC180Q9P1Z9 1646 aa15.25■□□□□ 0.03
VPS37A-207ENST00000520997 FOXD1Q16676 465 aa15.09■□□□□ 0.01
VPS37A-207ENST00000520997 DNAJC5BQ9UF47 199 aa15.07■□□□□ 0
VPS37A-207ENST00000520997 RB1CC1Q8TDY2 1594 aa14.75□□□□□ -0.05
VPS37A-207ENST00000520997 NACADO15069 1562 aa14.49□□□□□ -0.09
VPS37A-207ENST00000520997 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.09
VPS37A-207ENST00000520997 PABPN1Q86U42 306 aaKnown RBP eCLIP14.43□□□□□ -0.1
VPS37A-207ENST00000520997 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
VPS37A-207ENST00000520997 DNAJC5Q9H3Z4 198 aa14.3□□□□□ -0.12
VPS37A-207ENST00000520997 BICRAQ9NZM4 1560 aa14.28□□□□□ -0.12
VPS37A-207ENST00000520997 CECR2Q9BXF3 1484 aa14.19□□□□□ -0.14
VPS37A-207ENST00000520997 MSH5O43196 834 aa14.18□□□□□ -0.14
VPS37A-207ENST00000520997 DCAF8L2P0C7V8 631 aa14.18□□□□□ -0.14
VPS37A-207ENST00000520997 CC2D2AQ9P2K1 1620 aa14.17□□□□□ -0.14
VPS37A-207ENST00000520997 PIAS4Q8N2W9 510 aaPredicted RBP14.13□□□□□ -0.15
VPS37A-207ENST00000520997 SHROOM4Q9ULL8 1493 aa14.11□□□□□ -0.15
VPS37A-207ENST00000520997 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
VPS37A-207ENST00000520997 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
VPS37A-207ENST00000520997 ADRA2BP18089 450 aa14.04□□□□□ -0.16
VPS37A-207ENST00000520997 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
VPS37A-207ENST00000520997 POTEDQ86YR6 584 aa13.82□□□□□ -0.2
VPS37A-207ENST00000520997 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
VPS37A-207ENST00000520997 CUX2O14529 1486 aa13.78□□□□□ -0.2
VPS37A-207ENST00000520997 DCAF1Q9Y4B6 1507 aa13.71□□□□□ -0.21
VPS37A-207ENST00000520997 ZCCHC6Q5VYS8 1495 aaKnown RBP13.67□□□□□ -0.22
VPS37A-207ENST00000520997 ERCC6Q03468 1493 aa13.62□□□□□ -0.23
VPS37A-207ENST00000520997 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
VPS37A-207ENST00000520997 THOC2Q8NI27 1593 aaKnown RBP13.35□□□□□ -0.27
VPS37A-207ENST00000520997 NCAPD3P42695 1498 aa13.32□□□□□ -0.28
VPS37A-207ENST00000520997 NESP48681 1621 aa13.29□□□□□ -0.28
VPS37A-207ENST00000520997 HMGXB3Q12766 1538 aa13.24□□□□□ -0.29
VPS37A-207ENST00000520997 SMARCA2P51531 1590 aa13.23□□□□□ -0.29
VPS37A-207ENST00000520997 ATAD2BQ9ULI0 1458 aa13.21□□□□□ -0.3
VPS37A-207ENST00000520997 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.3
VPS37A-207ENST00000520997 LAMC3Q9Y6N6 1575 aa13.19□□□□□ -0.3
VPS37A-207ENST00000520997 BAZ1AQ9NRL2 1556 aaPredicted RBP13.13□□□□□ -0.31
VPS37A-207ENST00000520997 SMARCA4P51532 1647 aa13.12□□□□□ -0.31
VPS37A-207ENST00000520997 BAZ1BQ9UIG0 1483 aaKnown RBP13.1□□□□□ -0.31
VPS37A-207ENST00000520997 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
VPS37A-207ENST00000520997 WDR62O43379 1518 aa13.03□□□□□ -0.32
VPS37A-207ENST00000520997 MRC2Q9UBG0 1479 aa13.02□□□□□ -0.33
VPS37A-207ENST00000520997 PEG3Q9GZU2 1588 aa12.98□□□□□ -0.33
VPS37A-207ENST00000520997 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
VPS37A-207ENST00000520997 RIMBP3CA6NJZ7 1639 aa12.96□□□□□ -0.33
VPS37A-207ENST00000520997 RIMBP3BA6NNM3 1639 aa12.96□□□□□ -0.33
VPS37A-207ENST00000520997 RIMBP3Q9UFD9 1639 aa12.96□□□□□ -0.33
VPS37A-207ENST00000520997 SCAF1Q9H7N4 1312 aaKnown RBP12.91□□□□□ -0.34
VPS37A-207ENST00000520997 MAPK8IP2Q13387 824 aaPredicted RBP12.88□□□□□ -0.35
VPS37A-207ENST00000520997 CADPSQ9ULU8 1353 aa12.88□□□□□ -0.35
VPS37A-207ENST00000520997 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
VPS37A-207ENST00000520997 DMRT2Q9Y5R5 561 aa12.85□□□□□ -0.35
VPS37A-207ENST00000520997 ARHGEF11O15085 1522 aa12.84□□□□□ -0.35
VPS37A-207ENST00000520997 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
VPS37A-207ENST00000520997 MROH2BQ7Z745 1585 aa12.77□□□□□ -0.36
VPS37A-207ENST00000520997 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.37
VPS37A-207ENST00000520997 CYB5RLQ6IPT4 315 aa12.71□□□□□ -0.37
VPS37A-207ENST00000520997 URB2Q14146 1524 aaKnown RBP12.69□□□□□ -0.38
VPS37A-207ENST00000520997 ARAP1Q96P48 1450 aa12.66□□□□□ -0.38
VPS37A-207ENST00000520997 CHD1O14646 1710 aa12.65□□□□□ -0.38
VPS37A-207ENST00000520997 PRDM2Q13029 1718 aa12.64□□□□□ -0.39
VPS37A-207ENST00000520997 CFTRP13569 1480 aa12.64□□□□□ -0.39
VPS37A-207ENST00000520997 WIZO95785 1651 aa12.64□□□□□ -0.39
VPS37A-207ENST00000520997 IFT140Q96RY7 1462 aa12.62□□□□□ -0.39
VPS37A-207ENST00000520997 ZNF608Q9ULD9 1512 aaPredicted RBP12.62□□□□□ -0.39
VPS37A-207ENST00000520997 PPP4R3CPQ6ZMV5 832 aa12.61□□□□□ -0.39
VPS37A-207ENST00000520997 EIF4G3O43432 1585 aaKnown RBP12.6□□□□□ -0.39
VPS37A-207ENST00000520997 RSF1Q96T23 1441 aaPredicted RBP12.59□□□□□ -0.39
VPS37A-207ENST00000520997 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
VPS37A-207ENST00000520997 FBLN2P98095 1184 aa12.45□□□□□ -0.42
VPS37A-207ENST00000520997 TOP2AP11388 1531 aaKnown RBP12.45□□□□□ -0.42
VPS37A-207ENST00000520997 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
VPS37A-207ENST00000520997 TARBP1Q13395 1621 aaKnown RBP12.43□□□□□ -0.42
VPS37A-207ENST00000520997 DNMBPQ6XZF7 1577 aa12.42□□□□□ -0.42
VPS37A-207ENST00000520997 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
VPS37A-207ENST00000520997 AQRO60306 1485 aaKnown RBP eCLIP12.41□□□□□ -0.42
VPS37A-207ENST00000520997 SYNJ1O43426 1573 aa12.4□□□□□ -0.42
VPS37A-207ENST00000520997 CNKSR2Q8WXI2 1034 aa12.39□□□□□ -0.43
VPS37A-207ENST00000520997 HOXD11P31277 338 aaPredicted RBP12.37□□□□□ -0.43
VPS37A-207ENST00000520997 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
VPS37A-207ENST00000520997 SNAPC4Q5SXM2 1469 aa12.33□□□□□ -0.44
VPS37A-207ENST00000520997 WDR97A6NE52 1622 aa12.33□□□□□ -0.44
VPS37A-207ENST00000520997 ILDR1Q86SU0 546 aaPredicted RBP12.31□□□□□ -0.44
VPS37A-207ENST00000520997 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
VPS37A-207ENST00000520997 GAPVD1Q14C86 1478 aa12.31□□□□□ -0.44
VPS37A-207ENST00000520997 MAGI1Q96QZ7 1491 aaPredicted RBP12.29□□□□□ -0.44
VPS37A-207ENST00000520997 RNF216Q9NWF9 866 aaPredicted RBP12.28□□□□□ -0.44
VPS37A-207ENST00000520997 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.45
VPS37A-207ENST00000520997 KIF13AQ9H1H9 1805 aa12.27□□□□□ -0.45
VPS37A-207ENST00000520997 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
VPS37A-207ENST00000520997 SYNJ2O15056 1496 aa12.24□□□□□ -0.45
VPS37A-207ENST00000520997 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
VPS37A-207ENST00000520997 RAD54L2Q9Y4B4 1467 aa12.23□□□□□ -0.45
VPS37A-207ENST00000520997 PBRM1Q86U86 1689 aa12.22□□□□□ -0.45
VPS37A-207ENST00000520997 GRIN2BQ13224 1484 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms