RNA–Protein interactions for RNA: ENST00000520978.5

RUNX1T1-229, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-229ENST00000520978 NISCHQ9Y2I1 1504 aa37.42■■■■□ 3.58
RUNX1T1-229ENST00000520978 CCDC180Q9P1Z9 1646 aa33.42■■■□□ 2.94
RUNX1T1-229ENST00000520978 ABCC9O60706 1549 aa33.04■■■□□ 2.88
RUNX1T1-229ENST00000520978 RB1CC1Q8TDY2 1594 aa31.61■■■□□ 2.65
RUNX1T1-229ENST00000520978 NACADO15069 1562 aa31.47■■■□□ 2.63
RUNX1T1-229ENST00000520978 DCAF8L2P0C7V8 631 aa31.43■■■□□ 2.62
RUNX1T1-229ENST00000520978 MYO15BQ96JP2 1530 aa31.14■■■□□ 2.58
RUNX1T1-229ENST00000520978 ZCCHC6Q5VYS8 1495 aaKnown RBP31.13■■■□□ 2.57
RUNX1T1-229ENST00000520978 UNC13AQ9UPW8 1703 aa30.91■■■□□ 2.54
RUNX1T1-229ENST00000520978 DCAF1Q9Y4B6 1507 aa30.91■■■□□ 2.54
RUNX1T1-229ENST00000520978 PABPN1Q86U42 306 aaKnown RBP eCLIP30.81■■■□□ 2.52
RUNX1T1-229ENST00000520978 BICRAQ9NZM4 1560 aa30.66■■■□□ 2.5
RUNX1T1-229ENST00000520978 DNAJC5BQ9UF47 199 aa30.54■■■□□ 2.48
RUNX1T1-229ENST00000520978 SCRIBQ14160 1630 aa30.54■■■□□ 2.48
RUNX1T1-229ENST00000520978 SHROOM4Q9ULL8 1493 aa30.28■■■□□ 2.44
RUNX1T1-229ENST00000520978 EIF4G1Q04637 1599 aaKnown RBP29.89■■■□□ 2.38
RUNX1T1-229ENST00000520978 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
RUNX1T1-229ENST00000520978 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.35
RUNX1T1-229ENST00000520978 SMARCA4P51532 1647 aa29.13■■■□□ 2.25
RUNX1T1-229ENST00000520978 BAZ1AQ9NRL2 1556 aaPredicted RBP29.04■■■□□ 2.24
RUNX1T1-229ENST00000520978 NCAPD3P42695 1498 aa29.03■■■□□ 2.24
RUNX1T1-229ENST00000520978 ATAD2BQ9ULI0 1458 aa29.03■■■□□ 2.24
RUNX1T1-229ENST00000520978 SMARCA2P51531 1590 aa28.98■■■□□ 2.23
RUNX1T1-229ENST00000520978 HMGXB3Q12766 1538 aa28.89■■■□□ 2.22
RUNX1T1-229ENST00000520978 MROH2BQ7Z745 1585 aa28.86■■■□□ 2.21
RUNX1T1-229ENST00000520978 PEG3Q9GZU2 1588 aa28.8■■■□□ 2.2
RUNX1T1-229ENST00000520978 BAZ1BQ9UIG0 1483 aaKnown RBP28.8■■■□□ 2.2
RUNX1T1-229ENST00000520978 WIZO95785 1651 aa28.54■■■□□ 2.16
RUNX1T1-229ENST00000520978 ERCC6Q03468 1493 aa28.52■■■□□ 2.16
RUNX1T1-229ENST00000520978 NESP48681 1621 aa28.49■■■□□ 2.15
RUNX1T1-229ENST00000520978 RSF1Q96T23 1441 aaPredicted RBP28.39■■■□□ 2.14
RUNX1T1-229ENST00000520978 LAMC3Q9Y6N6 1575 aa28.34■■■□□ 2.13
RUNX1T1-229ENST00000520978 CUX2O14529 1486 aa28.27■■■□□ 2.12
RUNX1T1-229ENST00000520978 TOP2AP11388 1531 aaKnown RBP28.22■■■□□ 2.11
RUNX1T1-229ENST00000520978 CADPSQ9ULU8 1353 aa28.18■■■□□ 2.1
RUNX1T1-229ENST00000520978 PDS5BQ9NTI5 1447 aa28.16■■■□□ 2.1
RUNX1T1-229ENST00000520978 KIF21AQ7Z4S6 1674 aa28.16■■■□□ 2.1
RUNX1T1-229ENST00000520978 THOC2Q8NI27 1593 aaKnown RBP28.13■■■□□ 2.09
RUNX1T1-229ENST00000520978 CFTRP13569 1480 aa27.95■■■□□ 2.06
RUNX1T1-229ENST00000520978 MRC2Q9UBG0 1479 aa27.92■■■□□ 2.06
RUNX1T1-229ENST00000520978 CEP164Q9UPV0 1460 aa27.9■■■□□ 2.06
RUNX1T1-229ENST00000520978 FANCD2Q9BXW9 1451 aa27.89■■■□□ 2.06
RUNX1T1-229ENST00000520978 CCDC88BA6NC98 1476 aa27.87■■■□□ 2.05
RUNX1T1-229ENST00000520978 WDR62O43379 1518 aa27.82■■■□□ 2.04
RUNX1T1-229ENST00000520978 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
RUNX1T1-229ENST00000520978 DNAJC5Q9H3Z4 198 aa27.72■■■□□ 2.03
RUNX1T1-229ENST00000520978 URB2Q14146 1524 aaKnown RBP27.63■■■□□ 2.01
RUNX1T1-229ENST00000520978 SUPT5HO00267 1087 aaKnown RBP27.49■■□□□ 1.99
RUNX1T1-229ENST00000520978 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
RUNX1T1-229ENST00000520978 DNMBPQ6XZF7 1577 aa27.35■■□□□ 1.97
RUNX1T1-229ENST00000520978 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
RUNX1T1-229ENST00000520978 IFT140Q96RY7 1462 aa27.31■■□□□ 1.96
RUNX1T1-229ENST00000520978 ZNF608Q9ULD9 1512 aaPredicted RBP27.23■■□□□ 1.95
RUNX1T1-229ENST00000520978 POLA1P09884 1462 aaPredicted RBP27.16■■□□□ 1.94
RUNX1T1-229ENST00000520978 EIF4G3O43432 1585 aaKnown RBP27.13■■□□□ 1.93
RUNX1T1-229ENST00000520978 TARBP1Q13395 1621 aaKnown RBP27.12■■□□□ 1.93
RUNX1T1-229ENST00000520978 CUX1P39880 1505 aa27.1■■□□□ 1.93
RUNX1T1-229ENST00000520978 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
RUNX1T1-229ENST00000520978 RAD54L2Q9Y4B4 1467 aa27.06■■□□□ 1.92
RUNX1T1-229ENST00000520978 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.92
RUNX1T1-229ENST00000520978 SOGA1O94964 1423 aa27.02■■□□□ 1.92
RUNX1T1-229ENST00000520978 OSCARQ8IYS5 282 aa27.01■■□□□ 1.91
RUNX1T1-229ENST00000520978 TDRD9Q8NDG6 1382 aaKnown RBP26.93■■□□□ 1.9
RUNX1T1-229ENST00000520978 WDR97A6NE52 1622 aa26.87■■□□□ 1.89
RUNX1T1-229ENST00000520978 CHD1O14646 1710 aa26.85■■□□□ 1.89
RUNX1T1-229ENST00000520978 WRNQ14191 1432 aaPredicted RBP eCLIP26.81■■□□□ 1.88
RUNX1T1-229ENST00000520978 SNAPC4Q5SXM2 1469 aa26.8■■□□□ 1.88
RUNX1T1-229ENST00000520978 FBLN2P98095 1184 aa26.79■■□□□ 1.88
RUNX1T1-229ENST00000520978 TRIM41Q8WV44 630 aa26.78■■□□□ 1.88
RUNX1T1-229ENST00000520978 TOP2BQ02880 1626 aa26.77■■□□□ 1.88
RUNX1T1-229ENST00000520978 BIVM-ERCC5R4GMW8 1640 aa26.77■■□□□ 1.88
RUNX1T1-229ENST00000520978 SYNJ1O43426 1573 aa26.77■■□□□ 1.88
RUNX1T1-229ENST00000520978 ABCA10Q8WWZ4 1543 aa26.75■■□□□ 1.87
RUNX1T1-229ENST00000520978 GRIN2BQ13224 1484 aa26.75■■□□□ 1.87
RUNX1T1-229ENST00000520978 GAPVD1Q14C86 1478 aa26.72■■□□□ 1.87
RUNX1T1-229ENST00000520978 MAGI1Q96QZ7 1491 aaPredicted RBP26.72■■□□□ 1.87
RUNX1T1-229ENST00000520978 PBRM1Q86U86 1689 aa26.72■■□□□ 1.87
RUNX1T1-229ENST00000520978 ABCA5Q8WWZ7 1642 aa26.7■■□□□ 1.86
RUNX1T1-229ENST00000520978 RIMBP3CA6NJZ7 1639 aa26.68■■□□□ 1.86
RUNX1T1-229ENST00000520978 RIMBP3BA6NNM3 1639 aa26.68■■□□□ 1.86
RUNX1T1-229ENST00000520978 RIMBP3Q9UFD9 1639 aa26.68■■□□□ 1.86
RUNX1T1-229ENST00000520978 ARHGEF11O15085 1522 aa26.64■■□□□ 1.85
RUNX1T1-229ENST00000520978 CHMP7Q8WUX9 453 aaPredicted RBP26.63■■□□□ 1.85
RUNX1T1-229ENST00000520978 SYNJ2O15056 1496 aa26.62■■□□□ 1.85
RUNX1T1-229ENST00000520978 CLASP1Q7Z460 1538 aa26.52■■□□□ 1.84
RUNX1T1-229ENST00000520978 ADAMTS12P58397 1594 aa26.49■■□□□ 1.83
RUNX1T1-229ENST00000520978 ERICH3Q5RHP9 1530 aa26.43■■□□□ 1.82
RUNX1T1-229ENST00000520978 GRIN2AQ12879 1464 aa26.42■■□□□ 1.82
RUNX1T1-229ENST00000520978 ARAP1Q96P48 1450 aa26.41■■□□□ 1.82
RUNX1T1-229ENST00000520978 FHAD1B1AJZ9 1412 aa26.39■■□□□ 1.82
RUNX1T1-229ENST00000520978 CYB5RLQ6IPT4 315 aa26.38■■□□□ 1.81
RUNX1T1-229ENST00000520978 CEP170Q5SW79 1584 aa26.33■■□□□ 1.8
RUNX1T1-229ENST00000520978 NUP160Q12769 1436 aa26.3■■□□□ 1.8
RUNX1T1-229ENST00000520978 KIF27Q86VH2 1401 aa26.26■■□□□ 1.79
RUNX1T1-229ENST00000520978 IGF1RP08069 1367 aa26.16■■□□□ 1.78
RUNX1T1-229ENST00000520978 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
RUNX1T1-229ENST00000520978 CUL7Q14999 1698 aa26.15■■□□□ 1.78
RUNX1T1-229ENST00000520978 SHROOM2Q13796 1616 aa26.14■■□□□ 1.77
RUNX1T1-229ENST00000520978 RUSC2Q8N2Y8 1516 aa26.1■■□□□ 1.77
RUNX1T1-229ENST00000520978 PRG4Q92954 1404 aaPredicted RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms