RNA–Protein interactions for RNA: ENST00000520964.1

RTL8A-203, Transcript of retrotransposon Gag like 8A, humanhuman

TSL 3

Gene RTL8A, Length 817 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8A-203ENST00000520964 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
RTL8A-203ENST00000520964 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
RTL8A-203ENST00000520964 ZCCHC6Q5VYS8 1495 aaKnown RBP19.11■□□□□ 0.65
RTL8A-203ENST00000520964 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
RTL8A-203ENST00000520964 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
RTL8A-203ENST00000520964 ABCC9O60706 1549 aa18.69■□□□□ 0.58
RTL8A-203ENST00000520964 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
RTL8A-203ENST00000520964 NACADO15069 1562 aa18.53■□□□□ 0.56
RTL8A-203ENST00000520964 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
RTL8A-203ENST00000520964 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.52
RTL8A-203ENST00000520964 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
RTL8A-203ENST00000520964 UNC13AQ9UPW8 1703 aa17.96■□□□□ 0.47
RTL8A-203ENST00000520964 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
RTL8A-203ENST00000520964 SUPT5HO00267 1087 aaKnown RBP17.62■□□□□ 0.41
RTL8A-203ENST00000520964 CECR2Q9BXF3 1484 aa17.62■□□□□ 0.41
RTL8A-203ENST00000520964 RSF1Q96T23 1441 aaPredicted RBP17.61■□□□□ 0.41
RTL8A-203ENST00000520964 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
RTL8A-203ENST00000520964 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
RTL8A-203ENST00000520964 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
RTL8A-203ENST00000520964 SMARCA4P51532 1647 aa17.48■□□□□ 0.39
RTL8A-203ENST00000520964 WIZO95785 1651 aa17.36■□□□□ 0.37
RTL8A-203ENST00000520964 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
RTL8A-203ENST00000520964 TOP2AP11388 1531 aaKnown RBP17.24■□□□□ 0.35
RTL8A-203ENST00000520964 EIF4G1Q04637 1599 aaKnown RBP17.23■□□□□ 0.35
RTL8A-203ENST00000520964 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
RTL8A-203ENST00000520964 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
RTL8A-203ENST00000520964 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
RTL8A-203ENST00000520964 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
RTL8A-203ENST00000520964 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
RTL8A-203ENST00000520964 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
RTL8A-203ENST00000520964 CC2D2AQ9P2K1 1620 aa16.97■□□□□ 0.31
RTL8A-203ENST00000520964 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
RTL8A-203ENST00000520964 CFTRP13569 1480 aa16.69■□□□□ 0.26
RTL8A-203ENST00000520964 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
RTL8A-203ENST00000520964 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
RTL8A-203ENST00000520964 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
RTL8A-203ENST00000520964 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
RTL8A-203ENST00000520964 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
RTL8A-203ENST00000520964 DNAJC5BQ9UF47 199 aa16.52■□□□□ 0.24
RTL8A-203ENST00000520964 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
RTL8A-203ENST00000520964 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
RTL8A-203ENST00000520964 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
RTL8A-203ENST00000520964 BIVM-ERCC5R4GMW8 1640 aa16.46■□□□□ 0.23
RTL8A-203ENST00000520964 NESP48681 1621 aa16.41■□□□□ 0.22
RTL8A-203ENST00000520964 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
RTL8A-203ENST00000520964 CUX1P39880 1505 aa16.4■□□□□ 0.22
RTL8A-203ENST00000520964 EEA1Q15075 1411 aa16.36■□□□□ 0.21
RTL8A-203ENST00000520964 PDS5BQ9NTI5 1447 aa16.36■□□□□ 0.21
RTL8A-203ENST00000520964 CEP164Q9UPV0 1460 aa16.3■□□□□ 0.2
RTL8A-203ENST00000520964 SOGA1O94964 1423 aa16.29■□□□□ 0.2
RTL8A-203ENST00000520964 DNMBPQ6XZF7 1577 aa16.29■□□□□ 0.2
RTL8A-203ENST00000520964 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
RTL8A-203ENST00000520964 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
RTL8A-203ENST00000520964 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
RTL8A-203ENST00000520964 LOC105371045A0A1W2PR82 267 aa16.23■□□□□ 0.19
RTL8A-203ENST00000520964 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
RTL8A-203ENST00000520964 URB2Q14146 1524 aaKnown RBP16.21■□□□□ 0.19
RTL8A-203ENST00000520964 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
RTL8A-203ENST00000520964 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
RTL8A-203ENST00000520964 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
RTL8A-203ENST00000520964 KIF27Q86VH2 1401 aa16.15■□□□□ 0.18
RTL8A-203ENST00000520964 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
RTL8A-203ENST00000520964 KIF21BO75037 1637 aa16.13■□□□□ 0.17
RTL8A-203ENST00000520964 ABCA10Q8WWZ4 1543 aa16.13■□□□□ 0.17
RTL8A-203ENST00000520964 WDR62O43379 1518 aa16.09■□□□□ 0.17
RTL8A-203ENST00000520964 CUX2O14529 1486 aa16.08■□□□□ 0.16
RTL8A-203ENST00000520964 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
RTL8A-203ENST00000520964 WDR97A6NE52 1622 aa16.08■□□□□ 0.16
RTL8A-203ENST00000520964 PRXQ9BXM0 1461 aa16.07■□□□□ 0.16
RTL8A-203ENST00000520964 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
RTL8A-203ENST00000520964 ERICH3Q5RHP9 1530 aa16.05■□□□□ 0.16
RTL8A-203ENST00000520964 TNIKQ9UKE5 1360 aa16.05■□□□□ 0.16
RTL8A-203ENST00000520964 THOC2Q8NI27 1593 aaKnown RBP16.03■□□□□ 0.16
RTL8A-203ENST00000520964 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
RTL8A-203ENST00000520964 IGF1RP08069 1367 aa16.02■□□□□ 0.16
RTL8A-203ENST00000520964 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.16
RTL8A-203ENST00000520964 RAPGEF2Q9Y4G8 1499 aa15.98■□□□□ 0.15
RTL8A-203ENST00000520964 ABCA5Q8WWZ7 1642 aa15.98■□□□□ 0.15
RTL8A-203ENST00000520964 IFT140Q96RY7 1462 aa15.96■□□□□ 0.14
RTL8A-203ENST00000520964 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
RTL8A-203ENST00000520964 CUL7Q14999 1698 aa15.92■□□□□ 0.14
RTL8A-203ENST00000520964 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
RTL8A-203ENST00000520964 UBTFP17480 764 aaKnown RBP15.91■□□□□ 0.14
RTL8A-203ENST00000520964 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
RTL8A-203ENST00000520964 CEP162Q5TB80 1403 aa15.9■□□□□ 0.14
RTL8A-203ENST00000520964 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
RTL8A-203ENST00000520964 PBRM1Q86U86 1689 aa15.83■□□□□ 0.13
RTL8A-203ENST00000520964 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
RTL8A-203ENST00000520964 AQRO60306 1485 aaKnown RBP eCLIP15.81■□□□□ 0.122e-9■■■■■ 56.7
RTL8A-203ENST00000520964 ZNF608Q9ULD9 1512 aaPredicted RBP15.81■□□□□ 0.12
RTL8A-203ENST00000520964 CLIP1P30622 1438 aa15.79■□□□□ 0.12
RTL8A-203ENST00000520964 EIF4G3O43432 1585 aaKnown RBP15.77■□□□□ 0.11
RTL8A-203ENST00000520964 ADAMTS12P58397 1594 aa15.77■□□□□ 0.11
RTL8A-203ENST00000520964 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.11
RTL8A-203ENST00000520964 CTTNBP2Q8WZ74 1663 aa15.71■□□□□ 0.11
RTL8A-203ENST00000520964 MAGI1Q96QZ7 1491 aaPredicted RBP15.71■□□□□ 0.1
RTL8A-203ENST00000520964 SNAPC4Q5SXM2 1469 aa15.68■□□□□ 0.1
RTL8A-203ENST00000520964 VPS8Q8N3P4 1428 aa15.68■□□□□ 0.1
RTL8A-203ENST00000520964 ARAP1Q96P48 1450 aa15.67■□□□□ 0.1
RTL8A-203ENST00000520964 ARHGAP35Q9NRY4 1499 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms