RNA–Protein interactions for RNA: ENST00000520940.1

EXTL3-208, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-208ENST00000520940 NISCHQ9Y2I1 1504 aa26.22■■□□□ 1.79
EXTL3-208ENST00000520940 CCDC180Q9P1Z9 1646 aa23.54■■□□□ 1.36
EXTL3-208ENST00000520940 ABCC9O60706 1549 aa23.27■■□□□ 1.32
EXTL3-208ENST00000520940 RB1CC1Q8TDY2 1594 aa22.27■■□□□ 1.16
EXTL3-208ENST00000520940 NACADO15069 1562 aa22.15■■□□□ 1.14
EXTL3-208ENST00000520940 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
EXTL3-208ENST00000520940 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
EXTL3-208ENST00000520940 UNC13AQ9UPW8 1703 aa21.86■■□□□ 1.09
EXTL3-208ENST00000520940 ZCCHC6Q5VYS8 1495 aaKnown RBP21.79■■□□□ 1.08
EXTL3-208ENST00000520940 DCAF1Q9Y4B6 1507 aa21.69■■□□□ 1.06
EXTL3-208ENST00000520940 PABPN1Q86U42 306 aaKnown RBP eCLIP21.62■■□□□ 1.05
EXTL3-208ENST00000520940 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
EXTL3-208ENST00000520940 DNAJC5BQ9UF47 199 aa21.59■■□□□ 1.05
EXTL3-208ENST00000520940 SCRIBQ14160 1630 aa21.43■■□□□ 1.02
EXTL3-208ENST00000520940 SHROOM4Q9ULL8 1493 aa21.36■■□□□ 1.01
EXTL3-208ENST00000520940 CC2D2AQ9P2K1 1620 aa21.07■□□□□ 0.96
EXTL3-208ENST00000520940 EIF4G1Q04637 1599 aaKnown RBP21.06■□□□□ 0.96
EXTL3-208ENST00000520940 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
EXTL3-208ENST00000520940 SMARCA4P51532 1647 aa20.45■□□□□ 0.87
EXTL3-208ENST00000520940 NCAPD3P42695 1498 aa20.4■□□□□ 0.86
EXTL3-208ENST00000520940 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
EXTL3-208ENST00000520940 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
EXTL3-208ENST00000520940 BAZ1AQ9NRL2 1556 aaPredicted RBP20.36■□□□□ 0.85
EXTL3-208ENST00000520940 HMGXB3Q12766 1538 aa20.33■□□□□ 0.85
EXTL3-208ENST00000520940 PEG3Q9GZU2 1588 aa20.25■□□□□ 0.83
EXTL3-208ENST00000520940 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
EXTL3-208ENST00000520940 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
EXTL3-208ENST00000520940 ERCC6Q03468 1493 aa20.09■□□□□ 0.81
EXTL3-208ENST00000520940 NESP48681 1621 aa20.04■□□□□ 0.8
EXTL3-208ENST00000520940 WIZO95785 1651 aa20■□□□□ 0.79
EXTL3-208ENST00000520940 CUX2O14529 1486 aa20■□□□□ 0.79
EXTL3-208ENST00000520940 LAMC3Q9Y6N6 1575 aa19.97■□□□□ 0.79
EXTL3-208ENST00000520940 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
EXTL3-208ENST00000520940 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
EXTL3-208ENST00000520940 RSF1Q96T23 1441 aaPredicted RBP19.82■□□□□ 0.76
EXTL3-208ENST00000520940 PDS5BQ9NTI5 1447 aa19.79■□□□□ 0.76
EXTL3-208ENST00000520940 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
EXTL3-208ENST00000520940 TOP2AP11388 1531 aaKnown RBP19.76■□□□□ 0.75
EXTL3-208ENST00000520940 DNAJC5Q9H3Z4 198 aa19.7■□□□□ 0.74
EXTL3-208ENST00000520940 MRC2Q9UBG0 1479 aa19.65■□□□□ 0.74
EXTL3-208ENST00000520940 WDR62O43379 1518 aa19.61■□□□□ 0.73
EXTL3-208ENST00000520940 CFTRP13569 1480 aa19.61■□□□□ 0.73
EXTL3-208ENST00000520940 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
EXTL3-208ENST00000520940 PRDM2Q13029 1718 aa19.59■□□□□ 0.73
EXTL3-208ENST00000520940 FANCD2Q9BXW9 1451 aa19.58■□□□□ 0.72
EXTL3-208ENST00000520940 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
EXTL3-208ENST00000520940 URB2Q14146 1524 aaKnown RBP19.42■□□□□ 0.7
EXTL3-208ENST00000520940 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
EXTL3-208ENST00000520940 DNMBPQ6XZF7 1577 aa19.22■□□□□ 0.67
EXTL3-208ENST00000520940 IFT140Q96RY7 1462 aa19.2■□□□□ 0.66
EXTL3-208ENST00000520940 ABCC8Q09428 1581 aa19.19■□□□□ 0.66
EXTL3-208ENST00000520940 ZNF608Q9ULD9 1512 aaPredicted RBP19.15■□□□□ 0.66
EXTL3-208ENST00000520940 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
EXTL3-208ENST00000520940 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
EXTL3-208ENST00000520940 POLA1P09884 1462 aaPredicted RBP19.06■□□□□ 0.64
EXTL3-208ENST00000520940 OSCARQ8IYS5 282 aa19.03■□□□□ 0.64
EXTL3-208ENST00000520940 SUPT5HO00267 1087 aaKnown RBP19.01■□□□□ 0.63
EXTL3-208ENST00000520940 CUX1P39880 1505 aa18.99■□□□□ 0.63
EXTL3-208ENST00000520940 AQRO60306 1485 aaKnown RBP eCLIP18.97■□□□□ 0.63
EXTL3-208ENST00000520940 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
EXTL3-208ENST00000520940 CHD1O14646 1710 aa18.96■□□□□ 0.63
EXTL3-208ENST00000520940 RAD54L2Q9Y4B4 1467 aa18.96■□□□□ 0.63
EXTL3-208ENST00000520940 WDR97A6NE52 1622 aa18.93■□□□□ 0.62
EXTL3-208ENST00000520940 SOGA1O94964 1423 aa18.92■□□□□ 0.62
EXTL3-208ENST00000520940 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
EXTL3-208ENST00000520940 RIMBP3CA6NJZ7 1639 aa18.89■□□□□ 0.61
EXTL3-208ENST00000520940 RIMBP3BA6NNM3 1639 aa18.89■□□□□ 0.61
EXTL3-208ENST00000520940 RIMBP3Q9UFD9 1639 aa18.89■□□□□ 0.61
EXTL3-208ENST00000520940 TDRD9Q8NDG6 1382 aaKnown RBP18.86■□□□□ 0.61
EXTL3-208ENST00000520940 SNAPC4Q5SXM2 1469 aa18.83■□□□□ 0.6
EXTL3-208ENST00000520940 PBRM1Q86U86 1689 aa18.82■□□□□ 0.6
EXTL3-208ENST00000520940 ARHGEF11O15085 1522 aa18.81■□□□□ 0.6
EXTL3-208ENST00000520940 GRIN2BQ13224 1484 aa18.78■□□□□ 0.6
EXTL3-208ENST00000520940 MAGI1Q96QZ7 1491 aaPredicted RBP18.78■□□□□ 0.6
EXTL3-208ENST00000520940 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
EXTL3-208ENST00000520940 ABCA10Q8WWZ4 1543 aa18.77■□□□□ 0.6
EXTL3-208ENST00000520940 ABCA5Q8WWZ7 1642 aa18.77■□□□□ 0.6
EXTL3-208ENST00000520940 FBLN2P98095 1184 aa18.76■□□□□ 0.59
EXTL3-208ENST00000520940 TOP2BQ02880 1626 aa18.75■□□□□ 0.59
EXTL3-208ENST00000520940 SYNJ1O43426 1573 aa18.73■□□□□ 0.59
EXTL3-208ENST00000520940 GAPVD1Q14C86 1478 aa18.73■□□□□ 0.59
EXTL3-208ENST00000520940 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
EXTL3-208ENST00000520940 CLASP1Q7Z460 1538 aa18.7■□□□□ 0.58
EXTL3-208ENST00000520940 WRNQ14191 1432 aaPredicted RBP eCLIP18.7■□□□□ 0.58
EXTL3-208ENST00000520940 CHMP7Q8WUX9 453 aaPredicted RBP18.66■□□□□ 0.58
EXTL3-208ENST00000520940 ARAP1Q96P48 1450 aa18.65■□□□□ 0.58
EXTL3-208ENST00000520940 ADAMTS12P58397 1594 aa18.61■□□□□ 0.57
EXTL3-208ENST00000520940 CYB5RLQ6IPT4 315 aa18.57■□□□□ 0.56
EXTL3-208ENST00000520940 GRIN2AQ12879 1464 aa18.55■□□□□ 0.56
EXTL3-208ENST00000520940 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
EXTL3-208ENST00000520940 CEP170Q5SW79 1584 aa18.5■□□□□ 0.55
EXTL3-208ENST00000520940 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
EXTL3-208ENST00000520940 NUP160Q12769 1436 aa18.48■□□□□ 0.55
EXTL3-208ENST00000520940 SHROOM2Q13796 1616 aa18.42■□□□□ 0.54
EXTL3-208ENST00000520940 ERCC6L2Q5T890 1561 aa18.41■□□□□ 0.54
EXTL3-208ENST00000520940 RUSC2Q8N2Y8 1516 aa18.35■□□□□ 0.53
EXTL3-208ENST00000520940 CUL7Q14999 1698 aa18.34■□□□□ 0.53
EXTL3-208ENST00000520940 KIF27Q86VH2 1401 aa18.33■□□□□ 0.53
EXTL3-208ENST00000520940 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
EXTL3-208ENST00000520940 IGF1RP08069 1367 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms