RNA–Protein interactions for RNA: ENST00000520926.1

MTCL1-210, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 4

Gene MTCL1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-210ENST00000520926 NISCHQ9Y2I1 1504 aa28.1■■■□□ 2.09
MTCL1-210ENST00000520926 CCDC180Q9P1Z9 1646 aa25.13■■□□□ 1.61
MTCL1-210ENST00000520926 ABCC9O60706 1549 aa24.64■■□□□ 1.53
MTCL1-210ENST00000520926 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
MTCL1-210ENST00000520926 NACADO15069 1562 aa23.61■■□□□ 1.37
MTCL1-210ENST00000520926 DCAF8L2P0C7V8 631 aa23.49■■□□□ 1.35
MTCL1-210ENST00000520926 MYO15BQ96JP2 1530 aa23.41■■□□□ 1.34
MTCL1-210ENST00000520926 ZCCHC6Q5VYS8 1495 aaKnown RBP23.37■■□□□ 1.33
MTCL1-210ENST00000520926 DCAF1Q9Y4B6 1507 aa23.26■■□□□ 1.31
MTCL1-210ENST00000520926 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
MTCL1-210ENST00000520926 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.27
MTCL1-210ENST00000520926 BICRAQ9NZM4 1560 aa22.96■■□□□ 1.27
MTCL1-210ENST00000520926 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
MTCL1-210ENST00000520926 DNAJC5BQ9UF47 199 aa22.71■■□□□ 1.23
MTCL1-210ENST00000520926 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
MTCL1-210ENST00000520926 EIF4G1Q04637 1599 aaKnown RBP22.37■■□□□ 1.17
MTCL1-210ENST00000520926 CC2D2AQ9P2K1 1620 aa22.33■■□□□ 1.17
MTCL1-210ENST00000520926 CECR2Q9BXF3 1484 aa22.15■■□□□ 1.14
MTCL1-210ENST00000520926 SMARCA4P51532 1647 aa21.87■■□□□ 1.09
MTCL1-210ENST00000520926 BAZ1AQ9NRL2 1556 aaPredicted RBP21.81■■□□□ 1.08
MTCL1-210ENST00000520926 NCAPD3P42695 1498 aa21.76■■□□□ 1.07
MTCL1-210ENST00000520926 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
MTCL1-210ENST00000520926 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
MTCL1-210ENST00000520926 HMGXB3Q12766 1538 aa21.66■■□□□ 1.06
MTCL1-210ENST00000520926 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
MTCL1-210ENST00000520926 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
MTCL1-210ENST00000520926 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
MTCL1-210ENST00000520926 WIZO95785 1651 aa21.46■■□□□ 1.03
MTCL1-210ENST00000520926 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
MTCL1-210ENST00000520926 NESP48681 1621 aa21.28■■□□□ 1
MTCL1-210ENST00000520926 LAMC3Q9Y6N6 1575 aa21.26■□□□□ 0.99
MTCL1-210ENST00000520926 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
MTCL1-210ENST00000520926 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
MTCL1-210ENST00000520926 KIF21AQ7Z4S6 1674 aa21.11■□□□□ 0.97
MTCL1-210ENST00000520926 CUX2O14529 1486 aa21.1■□□□□ 0.97
MTCL1-210ENST00000520926 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
MTCL1-210ENST00000520926 PDS5BQ9NTI5 1447 aa21.07■□□□□ 0.96
MTCL1-210ENST00000520926 THOC2Q8NI27 1593 aaKnown RBP21.04■□□□□ 0.96
MTCL1-210ENST00000520926 CFTRP13569 1480 aa20.95■□□□□ 0.94
MTCL1-210ENST00000520926 PRDM2Q13029 1718 aa20.94■□□□□ 0.94
MTCL1-210ENST00000520926 CCDC88BA6NC98 1476 aa20.92■□□□□ 0.94
MTCL1-210ENST00000520926 FANCD2Q9BXW9 1451 aa20.88■□□□□ 0.93
MTCL1-210ENST00000520926 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
MTCL1-210ENST00000520926 MRC2Q9UBG0 1479 aa20.87■□□□□ 0.93
MTCL1-210ENST00000520926 WDR62O43379 1518 aa20.83■□□□□ 0.92
MTCL1-210ENST00000520926 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
MTCL1-210ENST00000520926 SUPT5HO00267 1087 aaKnown RBP20.65■□□□□ 0.9
MTCL1-210ENST00000520926 DNAJC5Q9H3Z4 198 aa20.59■□□□□ 0.89
MTCL1-210ENST00000520926 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
MTCL1-210ENST00000520926 TOPBP1Q92547 1522 aa20.53■□□□□ 0.88
MTCL1-210ENST00000520926 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
MTCL1-210ENST00000520926 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
MTCL1-210ENST00000520926 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
MTCL1-210ENST00000520926 ZNF608Q9ULD9 1512 aaPredicted RBP20.34■□□□□ 0.85
MTCL1-210ENST00000520926 POLA1P09884 1462 aaPredicted RBP20.34■□□□□ 0.85
MTCL1-210ENST00000520926 CUX1P39880 1505 aa20.32■□□□□ 0.84
MTCL1-210ENST00000520926 EIF4G3O43432 1585 aaKnown RBP20.31■□□□□ 0.84
MTCL1-210ENST00000520926 FGD5Q6ZNL6 1462 aa20.28■□□□□ 0.84
MTCL1-210ENST00000520926 SOGA1O94964 1423 aa20.25■□□□□ 0.83
MTCL1-210ENST00000520926 RAD54L2Q9Y4B4 1467 aa20.24■□□□□ 0.83
MTCL1-210ENST00000520926 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
MTCL1-210ENST00000520926 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.825e-6■■■□□ 16.9
MTCL1-210ENST00000520926 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
MTCL1-210ENST00000520926 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
MTCL1-210ENST00000520926 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
MTCL1-210ENST00000520926 CHD1O14646 1710 aa20.13■□□□□ 0.81
MTCL1-210ENST00000520926 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
MTCL1-210ENST00000520926 WRNQ14191 1432 aaPredicted RBP eCLIP20.12■□□□□ 0.81
MTCL1-210ENST00000520926 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
MTCL1-210ENST00000520926 PBRM1Q86U86 1689 aa20.08■□□□□ 0.81
MTCL1-210ENST00000520926 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
MTCL1-210ENST00000520926 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
MTCL1-210ENST00000520926 GRIN2BQ13224 1484 aa20.04■□□□□ 0.8
MTCL1-210ENST00000520926 SNAPC4Q5SXM2 1469 aa20.03■□□□□ 0.8
MTCL1-210ENST00000520926 GAPVD1Q14C86 1478 aa20.02■□□□□ 0.8
MTCL1-210ENST00000520926 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
MTCL1-210ENST00000520926 FBLN2P98095 1184 aa19.98■□□□□ 0.79
MTCL1-210ENST00000520926 SYNJ2O15056 1496 aa19.93■□□□□ 0.78
MTCL1-210ENST00000520926 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
MTCL1-210ENST00000520926 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
MTCL1-210ENST00000520926 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
MTCL1-210ENST00000520926 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
MTCL1-210ENST00000520926 ARHGEF11O15085 1522 aa19.87■□□□□ 0.77
MTCL1-210ENST00000520926 ADAMTS12P58397 1594 aa19.86■□□□□ 0.77
MTCL1-210ENST00000520926 ERICH3Q5RHP9 1530 aa19.85■□□□□ 0.77
MTCL1-210ENST00000520926 CLASP1Q7Z460 1538 aa19.85■□□□□ 0.77
MTCL1-210ENST00000520926 TRIM41Q8WV44 630 aa19.84■□□□□ 0.77
MTCL1-210ENST00000520926 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
MTCL1-210ENST00000520926 FHAD1B1AJZ9 1412 aa19.77■□□□□ 0.76
MTCL1-210ENST00000520926 CEP170Q5SW79 1584 aa19.71■□□□□ 0.75
MTCL1-210ENST00000520926 KIF27Q86VH2 1401 aa19.71■□□□□ 0.75
MTCL1-210ENST00000520926 NUP160Q12769 1436 aa19.69■□□□□ 0.74
MTCL1-210ENST00000520926 ARAP1Q96P48 1450 aa19.69■□□□□ 0.74
MTCL1-210ENST00000520926 CUL7Q14999 1698 aa19.68■□□□□ 0.74
MTCL1-210ENST00000520926 CYB5RLQ6IPT4 315 aa19.66■□□□□ 0.74
MTCL1-210ENST00000520926 IGF1RP08069 1367 aa19.63■□□□□ 0.73
MTCL1-210ENST00000520926 SHROOM2Q13796 1616 aa19.62■□□□□ 0.73
MTCL1-210ENST00000520926 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
MTCL1-210ENST00000520926 ERCC6L2Q5T890 1561 aa19.55■□□□□ 0.72
MTCL1-210ENST00000520926 CARMIL1Q5VZK9 1371 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms