RNA–Protein interactions for RNA: ENST00000520893.5

CDK16-216, Transcript of cyclin dependent kinase 16, humanhuman

TSL 5

Gene CDK16, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-216ENST00000520893 NISCHQ9Y2I1 1504 aa49.65■■■■■ 5.54
CDK16-216ENST00000520893 CCDC180Q9P1Z9 1646 aa44.53■■■■■ 4.72
CDK16-216ENST00000520893 ABCC9O60706 1549 aa44.24■■■■■ 4.67
CDK16-216ENST00000520893 RB1CC1Q8TDY2 1594 aa42.21■■■■■ 4.35
CDK16-216ENST00000520893 NACADO15069 1562 aa41.96■■■■■ 4.31
CDK16-216ENST00000520893 DCAF8L2P0C7V8 631 aa41.69■■■■■ 4.26
CDK16-216ENST00000520893 UNC13AQ9UPW8 1703 aa41.46■■■■■ 4.23
CDK16-216ENST00000520893 MYO15BQ96JP2 1530 aa41.42■■■■■ 4.22
CDK16-216ENST00000520893 DNAJC5BQ9UF47 199 aa41.25■■■■■ 4.19
CDK16-216ENST00000520893 ZCCHC6Q5VYS8 1495 aaKnown RBP41.21■■■■■ 4.19
CDK16-216ENST00000520893 PABPN1Q86U42 306 aaKnown RBP eCLIP41.17■■■■■ 4.18
CDK16-216ENST00000520893 BICRAQ9NZM4 1560 aa41.04■■■■■ 4.16
CDK16-216ENST00000520893 DCAF1Q9Y4B6 1507 aa41■■■■■ 4.15
CDK16-216ENST00000520893 SCRIBQ14160 1630 aa40.61■■■■■ 4.09
CDK16-216ENST00000520893 SHROOM4Q9ULL8 1493 aa40.4■■■■■ 4.06
CDK16-216ENST00000520893 CC2D2AQ9P2K1 1620 aa40.02■■■■■ 4
CDK16-216ENST00000520893 EIF4G1Q04637 1599 aaKnown RBP39.98■■■■□ 3.99
CDK16-216ENST00000520893 CECR2Q9BXF3 1484 aa39.81■■■■□ 3.96
CDK16-216ENST00000520893 SMARCA4P51532 1647 aa38.74■■■■□ 3.79
CDK16-216ENST00000520893 NCAPD3P42695 1498 aa38.68■■■■□ 3.78
CDK16-216ENST00000520893 ATAD2BQ9ULI0 1458 aa38.64■■■■□ 3.78
CDK16-216ENST00000520893 SMARCA2P51531 1590 aa38.55■■■■□ 3.76
CDK16-216ENST00000520893 BAZ1AQ9NRL2 1556 aaPredicted RBP38.52■■■■□ 3.76
CDK16-216ENST00000520893 HMGXB3Q12766 1538 aa38.49■■■■□ 3.75
CDK16-216ENST00000520893 PEG3Q9GZU2 1588 aa38.32■■■■□ 3.73
CDK16-216ENST00000520893 BAZ1BQ9UIG0 1483 aaKnown RBP38.29■■■■□ 3.72
CDK16-216ENST00000520893 MROH2BQ7Z745 1585 aa38.29■■■■□ 3.72
CDK16-216ENST00000520893 ERCC6Q03468 1493 aa38.15■■■■□ 3.7
CDK16-216ENST00000520893 NESP48681 1621 aa38.11■■■■□ 3.69
CDK16-216ENST00000520893 CUX2O14529 1486 aa37.99■■■■□ 3.67
CDK16-216ENST00000520893 WIZO95785 1651 aa37.9■■■■□ 3.66
CDK16-216ENST00000520893 LAMC3Q9Y6N6 1575 aa37.85■■■■□ 3.65
CDK16-216ENST00000520893 KIF21AQ7Z4S6 1674 aa37.72■■■■□ 3.63
CDK16-216ENST00000520893 THOC2Q8NI27 1593 aaKnown RBP37.72■■■■□ 3.63
CDK16-216ENST00000520893 DNAJC5Q9H3Z4 198 aa37.64■■■■□ 3.62
CDK16-216ENST00000520893 PDS5BQ9NTI5 1447 aa37.53■■■■□ 3.6
CDK16-216ENST00000520893 RSF1Q96T23 1441 aaPredicted RBP37.52■■■■□ 3.6
CDK16-216ENST00000520893 CADPSQ9ULU8 1353 aa37.51■■■■□ 3.59
CDK16-216ENST00000520893 TOP2AP11388 1531 aaKnown RBP37.38■■■■□ 3.57
CDK16-216ENST00000520893 MRC2Q9UBG0 1479 aa37.26■■■■□ 3.56
CDK16-216ENST00000520893 WDR62O43379 1518 aa37.2■■■■□ 3.55
CDK16-216ENST00000520893 CFTRP13569 1480 aa37.17■■■■□ 3.54
CDK16-216ENST00000520893 CEP164Q9UPV0 1460 aa37.16■■■■□ 3.54
CDK16-216ENST00000520893 FANCD2Q9BXW9 1451 aa37.13■■■■□ 3.54
CDK16-216ENST00000520893 PRDM2Q13029 1718 aa37.02■■■■□ 3.52
CDK16-216ENST00000520893 CCDC88BA6NC98 1476 aa36.92■■■■□ 3.5
CDK16-216ENST00000520893 URB2Q14146 1524 aaKnown RBP36.86■■■■□ 3.49
CDK16-216ENST00000520893 TOPBP1Q92547 1522 aa36.49■■■■□ 3.43
CDK16-216ENST00000520893 DNMBPQ6XZF7 1577 aa36.39■■■■□ 3.42
CDK16-216ENST00000520893 IFT140Q96RY7 1462 aa36.38■■■■□ 3.41
CDK16-216ENST00000520893 ZNF608Q9ULD9 1512 aaPredicted RBP36.37■■■■□ 3.41
CDK16-216ENST00000520893 ABCC8Q09428 1581 aa36.33■■■■□ 3.41
CDK16-216ENST00000520893 EIF4G3O43432 1585 aaKnown RBP36.24■■■■□ 3.39
CDK16-216ENST00000520893 TARBP1Q13395 1621 aaKnown RBP36.2■■■■□ 3.39
CDK16-216ENST00000520893 OSCARQ8IYS5 282 aa36.2■■■■□ 3.39
CDK16-216ENST00000520893 TRIM41Q8WV44 630 aa36.13■■■■□ 3.37
CDK16-216ENST00000520893 POLA1P09884 1462 aaPredicted RBP36.12■■■■□ 3.37
CDK16-216ENST00000520893 AQRO60306 1485 aaKnown RBP eCLIP36.02■■■■□ 3.368e-9■■■■■ 38.5
CDK16-216ENST00000520893 RAD54L2Q9Y4B4 1467 aa35.99■■■■□ 3.35
CDK16-216ENST00000520893 CHD1O14646 1710 aa35.98■■■■□ 3.35
CDK16-216ENST00000520893 SUPT5HO00267 1087 aaKnown RBP35.98■■■■□ 3.35
CDK16-216ENST00000520893 CUX1P39880 1505 aa35.97■■■■□ 3.35
CDK16-216ENST00000520893 FGD5Q6ZNL6 1462 aa35.94■■■■□ 3.34
CDK16-216ENST00000520893 RIMBP3CA6NJZ7 1639 aa35.9■■■■□ 3.34
CDK16-216ENST00000520893 RIMBP3BA6NNM3 1639 aa35.9■■■■□ 3.34
CDK16-216ENST00000520893 RIMBP3Q9UFD9 1639 aa35.9■■■■□ 3.34
CDK16-216ENST00000520893 SOGA1O94964 1423 aa35.9■■■■□ 3.34
CDK16-216ENST00000520893 TDRD9Q8NDG6 1382 aaKnown RBP35.81■■■■□ 3.32
CDK16-216ENST00000520893 WDR97A6NE52 1622 aa35.79■■■■□ 3.32
CDK16-216ENST00000520893 ARHGEF11O15085 1522 aa35.77■■■■□ 3.32
CDK16-216ENST00000520893 SNAPC4Q5SXM2 1469 aa35.7■■■■□ 3.31
CDK16-216ENST00000520893 FBLN2P98095 1184 aa35.67■■■■□ 3.3
CDK16-216ENST00000520893 PBRM1Q86U86 1689 aa35.63■■■■□ 3.29
CDK16-216ENST00000520893 GRIN2BQ13224 1484 aa35.58■■■■□ 3.29
CDK16-216ENST00000520893 MAGI1Q96QZ7 1491 aaPredicted RBP35.58■■■■□ 3.29
CDK16-216ENST00000520893 ABCA5Q8WWZ7 1642 aa35.54■■■■□ 3.28
CDK16-216ENST00000520893 ABCA10Q8WWZ4 1543 aa35.52■■■■□ 3.28
CDK16-216ENST00000520893 GAPVD1Q14C86 1478 aa35.5■■■■□ 3.27
CDK16-216ENST00000520893 BIVM-ERCC5R4GMW8 1640 aa35.5■■■■□ 3.27
CDK16-216ENST00000520893 CLASP1Q7Z460 1538 aa35.48■■■■□ 3.27
CDK16-216ENST00000520893 SYNJ1O43426 1573 aa35.46■■■■□ 3.27
CDK16-216ENST00000520893 TOP2BQ02880 1626 aa35.46■■■■□ 3.27
CDK16-216ENST00000520893 SYNJ2O15056 1496 aa35.45■■■■□ 3.27
CDK16-216ENST00000520893 ARAP1Q96P48 1450 aa35.43■■■■□ 3.26
CDK16-216ENST00000520893 CHMP7Q8WUX9 453 aaPredicted RBP35.42■■■■□ 3.26
CDK16-216ENST00000520893 CYB5RLQ6IPT4 315 aa35.38■■■■□ 3.25
CDK16-216ENST00000520893 WRNQ14191 1432 aaPredicted RBP eCLIP35.38■■■■□ 3.25
CDK16-216ENST00000520893 ADAMTS12P58397 1594 aa35.24■■■■□ 3.23
CDK16-216ENST00000520893 GRIN2AQ12879 1464 aa35.16■■■■□ 3.22
CDK16-216ENST00000520893 CEP170Q5SW79 1584 aa35.09■■■■□ 3.21
CDK16-216ENST00000520893 ERICH3Q5RHP9 1530 aa35.08■■■■□ 3.21
CDK16-216ENST00000520893 FHAD1B1AJZ9 1412 aa35.03■■■■□ 3.2
CDK16-216ENST00000520893 NUP160Q12769 1436 aa35.02■■■■□ 3.2
CDK16-216ENST00000520893 ERCC6L2Q5T890 1561 aa34.99■■■■□ 3.19
CDK16-216ENST00000520893 SHROOM2Q13796 1616 aa34.92■■■■□ 3.18
CDK16-216ENST00000520893 TRHP20396 242 aaPredicted RBP34.9■■■■□ 3.18
CDK16-216ENST00000520893 RUSC2Q8N2Y8 1516 aa34.76■■■■□ 3.15
CDK16-216ENST00000520893 CUL7Q14999 1698 aa34.67■■■■□ 3.14
CDK16-216ENST00000520893 KIF27Q86VH2 1401 aa34.67■■■■□ 3.14
CDK16-216ENST00000520893 PRG4Q92954 1404 aaPredicted RBP34.64■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms