RNA–Protein interactions for RNA: ENST00000520789.1

PSD3-212, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 3

Gene PSD3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-212ENST00000520789 NISCHQ9Y2I1 1504 aa19.17■□□□□ 0.66
PSD3-212ENST00000520789 CCDC180Q9P1Z9 1646 aa17.01■□□□□ 0.31
PSD3-212ENST00000520789 AEBP2Q6ZN18 517 aaPredicted RBP16.96■□□□□ 0.31
PSD3-212ENST00000520789 ABCC9O60706 1549 aa16.6■□□□□ 0.25
PSD3-212ENST00000520789 NACADO15069 1562 aa16.03■□□□□ 0.16
PSD3-212ENST00000520789 RB1CC1Q8TDY2 1594 aa16.02■□□□□ 0.16
PSD3-212ENST00000520789 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
PSD3-212ENST00000520789 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
PSD3-212ENST00000520789 ZCCHC6Q5VYS8 1495 aaKnown RBP15.96■□□□□ 0.14
PSD3-212ENST00000520789 DCAF1Q9Y4B6 1507 aa15.9■□□□□ 0.14
PSD3-212ENST00000520789 CHIC1Q5VXU3 224 aa15.9■□□□□ 0.14
PSD3-212ENST00000520789 UNC13AQ9UPW8 1703 aa15.56■□□□□ 0.08
PSD3-212ENST00000520789 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
PSD3-212ENST00000520789 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
PSD3-212ENST00000520789 SCRIBQ14160 1630 aa15.47■□□□□ 0.07
PSD3-212ENST00000520789 SHROOM4Q9ULL8 1493 aa15.43■□□□□ 0.06
PSD3-212ENST00000520789 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
PSD3-212ENST00000520789 EIF4G1Q04637 1599 aaKnown RBP15.1■□□□□ 0.01
PSD3-212ENST00000520789 CC2D2AQ9P2K1 1620 aa15.02□□□□□ -0.01
PSD3-212ENST00000520789 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
PSD3-212ENST00000520789 BAZ1AQ9NRL2 1556 aaPredicted RBP14.86□□□□□ -0.03
PSD3-212ENST00000520789 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
PSD3-212ENST00000520789 NCAPD3P42695 1498 aa14.81□□□□□ -0.04
PSD3-212ENST00000520789 SMARCA2P51531 1590 aa14.78□□□□□ -0.04
PSD3-212ENST00000520789 ATAD2BQ9ULI0 1458 aa14.78□□□□□ -0.04
PSD3-212ENST00000520789 MROH2BQ7Z745 1585 aa14.74□□□□□ -0.05
PSD3-212ENST00000520789 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
PSD3-212ENST00000520789 HMGXB3Q12766 1538 aa14.7□□□□□ -0.06
PSD3-212ENST00000520789 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
PSD3-212ENST00000520789 RSF1Q96T23 1441 aaPredicted RBP14.62□□□□□ -0.07
PSD3-212ENST00000520789 WIZO95785 1651 aa14.55□□□□□ -0.08
PSD3-212ENST00000520789 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
PSD3-212ENST00000520789 SENP3Q9H4L4 574 aaPredicted RBP14.44□□□□□ -0.1
PSD3-212ENST00000520789 LAMC3Q9Y6N6 1575 aa14.38□□□□□ -0.11
PSD3-212ENST00000520789 CADPSQ9ULU8 1353 aa14.37□□□□□ -0.11
PSD3-212ENST00000520789 NESP48681 1621 aa14.36□□□□□ -0.11
PSD3-212ENST00000520789 ERCC6Q03468 1493 aa14.33□□□□□ -0.12
PSD3-212ENST00000520789 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
PSD3-212ENST00000520789 CCDC88BA6NC98 1476 aa14.28□□□□□ -0.12
PSD3-212ENST00000520789 CFTRP13569 1480 aa14.28□□□□□ -0.12
PSD3-212ENST00000520789 PHF23Q9BUL5 403 aaPredicted RBP14.27□□□□□ -0.13
PSD3-212ENST00000520789 SUPT5HO00267 1087 aaKnown RBP14.25□□□□□ -0.13
PSD3-212ENST00000520789 CUX2O14529 1486 aa14.2□□□□□ -0.14
PSD3-212ENST00000520789 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
PSD3-212ENST00000520789 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
PSD3-212ENST00000520789 CEP164Q9UPV0 1460 aa14.15□□□□□ -0.14
PSD3-212ENST00000520789 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
PSD3-212ENST00000520789 MRC2Q9UBG0 1479 aa14.13□□□□□ -0.15
PSD3-212ENST00000520789 PRDM2Q13029 1718 aa14.1□□□□□ -0.15
PSD3-212ENST00000520789 WDR62O43379 1518 aa14.07□□□□□ -0.16
PSD3-212ENST00000520789 ABCC8Q09428 1581 aa14□□□□□ -0.17
PSD3-212ENST00000520789 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
PSD3-212ENST00000520789 TOPBP1Q92547 1522 aa13.95□□□□□ -0.18
PSD3-212ENST00000520789 DNMBPQ6XZF7 1577 aa13.92□□□□□ -0.18
PSD3-212ENST00000520789 IFT140Q96RY7 1462 aa13.88□□□□□ -0.19
PSD3-212ENST00000520789 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.2
PSD3-212ENST00000520789 CUX1P39880 1505 aa13.82□□□□□ -0.2
PSD3-212ENST00000520789 SOGA1O94964 1423 aa13.8□□□□□ -0.2
PSD3-212ENST00000520789 WRNQ14191 1432 aaPredicted RBP eCLIP13.79□□□□□ -0.2
PSD3-212ENST00000520789 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
PSD3-212ENST00000520789 TARBP1Q13395 1621 aaKnown RBP13.77□□□□□ -0.21
PSD3-212ENST00000520789 ZNF608Q9ULD9 1512 aaPredicted RBP13.76□□□□□ -0.21
PSD3-212ENST00000520789 DNAJC5Q9H3Z4 198 aa13.76□□□□□ -0.21
PSD3-212ENST00000520789 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
PSD3-212ENST00000520789 TOP2BQ02880 1626 aa13.73□□□□□ -0.21
PSD3-212ENST00000520789 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
PSD3-212ENST00000520789 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.21
PSD3-212ENST00000520789 BIVM-ERCC5R4GMW8 1640 aa13.71□□□□□ -0.22
PSD3-212ENST00000520789 TDRD9Q8NDG6 1382 aaKnown RBP13.7□□□□□ -0.22
PSD3-212ENST00000520789 SYNJ1O43426 1573 aa13.69□□□□□ -0.22
PSD3-212ENST00000520789 EIF4G3O43432 1585 aaKnown RBP13.69□□□□□ -0.22
PSD3-212ENST00000520789 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
PSD3-212ENST00000520789 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
PSD3-212ENST00000520789 GRIN2BQ13224 1484 aa13.63□□□□□ -0.23
PSD3-212ENST00000520789 GAPVD1Q14C86 1478 aa13.62□□□□□ -0.23
PSD3-212ENST00000520789 MAGI1Q96QZ7 1491 aaPredicted RBP13.6□□□□□ -0.23
PSD3-212ENST00000520789 ABCA5Q8WWZ7 1642 aa13.58□□□□□ -0.24
PSD3-212ENST00000520789 SNAPC4Q5SXM2 1469 aa13.57□□□□□ -0.24
PSD3-212ENST00000520789 FBLN2P98095 1184 aa13.56□□□□□ -0.24
PSD3-212ENST00000520789 CHMP7Q8WUX9 453 aaPredicted RBP13.56□□□□□ -0.24
PSD3-212ENST00000520789 SYNJ2O15056 1496 aa13.54□□□□□ -0.24
PSD3-212ENST00000520789 ERICH3Q5RHP9 1530 aa13.53□□□□□ -0.24
PSD3-212ENST00000520789 FOXD1Q16676 465 aa13.52□□□□□ -0.25
PSD3-212ENST00000520789 KIF27Q86VH2 1401 aa13.52□□□□□ -0.25
PSD3-212ENST00000520789 PBRM1Q86U86 1689 aa13.52□□□□□ -0.25
PSD3-212ENST00000520789 TRIM41Q8WV44 630 aa13.5□□□□□ -0.25
PSD3-212ENST00000520789 FHAD1B1AJZ9 1412 aa13.49□□□□□ -0.25
PSD3-212ENST00000520789 CHD1O14646 1710 aa13.49□□□□□ -0.25
PSD3-212ENST00000520789 IGF1RP08069 1367 aa13.45□□□□□ -0.26
PSD3-212ENST00000520789 ADAMTS12P58397 1594 aa13.45□□□□□ -0.26
PSD3-212ENST00000520789 GRIN2AQ12879 1464 aa13.43□□□□□ -0.26
PSD3-212ENST00000520789 NUP160Q12769 1436 aa13.39□□□□□ -0.27
PSD3-212ENST00000520789 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
PSD3-212ENST00000520789 CARMIL1Q5VZK9 1371 aa13.38□□□□□ -0.27
PSD3-212ENST00000520789 CUL7Q14999 1698 aa13.37□□□□□ -0.27
PSD3-212ENST00000520789 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
PSD3-212ENST00000520789 CEP170Q5SW79 1584 aa13.33□□□□□ -0.28
PSD3-212ENST00000520789 RIMBP3CA6NJZ7 1639 aa13.33□□□□□ -0.28
PSD3-212ENST00000520789 RIMBP3BA6NNM3 1639 aa13.33□□□□□ -0.28
PSD3-212ENST00000520789 RIMBP3Q9UFD9 1639 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms