RNA–Protein interactions for RNA: ENST00000520741.1

TPD52-214, Transcript of tumor protein D52, humanhuman

TSL 4

Gene TPD52, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPD52-214ENST00000520741 NISCHQ9Y2I1 1504 aa12.27□□□□□ -0.45
TPD52-214ENST00000520741 ABCC9O60706 1549 aa11.25□□□□□ -0.61
TPD52-214ENST00000520741 CCDC180Q9P1Z9 1646 aa11.13□□□□□ -0.63
TPD52-214ENST00000520741 DNAJC5BQ9UF47 199 aa10.63□□□□□ -0.71
TPD52-214ENST00000520741 RB1CC1Q8TDY2 1594 aa10.63□□□□□ -0.71
TPD52-214ENST00000520741 UNC13AQ9UPW8 1703 aa10.5□□□□□ -0.73
TPD52-214ENST00000520741 NACADO15069 1562 aa10.5□□□□□ -0.73
TPD52-214ENST00000520741 DCAF8L2P0C7V8 631 aa10.44□□□□□ -0.74
TPD52-214ENST00000520741 PABPN1Q86U42 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
TPD52-214ENST00000520741 BICRAQ9NZM4 1560 aa10.33□□□□□ -0.76
TPD52-214ENST00000520741 MYO15BQ96JP2 1530 aa10.24□□□□□ -0.77
TPD52-214ENST00000520741 CC2D2AQ9P2K1 1620 aa10.17□□□□□ -0.78
TPD52-214ENST00000520741 SCRIBQ14160 1630 aa10.15□□□□□ -0.78
TPD52-214ENST00000520741 ZCCHC6Q5VYS8 1495 aaKnown RBP10.13□□□□□ -0.79
TPD52-214ENST00000520741 CECR2Q9BXF3 1484 aa10.12□□□□□ -0.79
TPD52-214ENST00000520741 SHROOM4Q9ULL8 1493 aa10.1□□□□□ -0.79
TPD52-214ENST00000520741 EIF4G1Q04637 1599 aaKnown RBP10.09□□□□□ -0.79
TPD52-214ENST00000520741 DCAF1Q9Y4B6 1507 aa10.08□□□□□ -0.8
TPD52-214ENST00000520741 DNAJC5Q9H3Z4 198 aa9.83□□□□□ -0.84
TPD52-214ENST00000520741 ERCC6Q03468 1493 aa9.72□□□□□ -0.85
TPD52-214ENST00000520741 CUX2O14529 1486 aa9.7□□□□□ -0.86
TPD52-214ENST00000520741 NCAPD3P42695 1498 aa9.66□□□□□ -0.86
TPD52-214ENST00000520741 SMARCA4P51532 1647 aa9.64□□□□□ -0.87
TPD52-214ENST00000520741 ATAD2BQ9ULI0 1458 aa9.63□□□□□ -0.87
TPD52-214ENST00000520741 NESP48681 1621 aa9.62□□□□□ -0.87
TPD52-214ENST00000520741 SMARCA2P51531 1590 aa9.62□□□□□ -0.87
TPD52-214ENST00000520741 HMGXB3Q12766 1538 aa9.61□□□□□ -0.87
TPD52-214ENST00000520741 THOC2Q8NI27 1593 aaKnown RBP9.57□□□□□ -0.88
TPD52-214ENST00000520741 KIF21AQ7Z4S6 1674 aa9.57□□□□□ -0.88
TPD52-214ENST00000520741 BAZ1BQ9UIG0 1483 aaKnown RBP9.56□□□□□ -0.88
TPD52-214ENST00000520741 BAZ1AQ9NRL2 1556 aaPredicted RBP9.54□□□□□ -0.88
TPD52-214ENST00000520741 LAMC3Q9Y6N6 1575 aa9.51□□□□□ -0.89
TPD52-214ENST00000520741 PEG3Q9GZU2 1588 aa9.5□□□□□ -0.89
TPD52-214ENST00000520741 MROH2BQ7Z745 1585 aa9.47□□□□□ -0.89
TPD52-214ENST00000520741 TRIM41Q8WV44 630 aa9.43□□□□□ -0.9
TPD52-214ENST00000520741 PDS5BQ9NTI5 1447 aa9.42□□□□□ -0.9
TPD52-214ENST00000520741 WIZO95785 1651 aa9.4□□□□□ -0.9
TPD52-214ENST00000520741 MRC2Q9UBG0 1479 aa9.39□□□□□ -0.91
TPD52-214ENST00000520741 WDR62O43379 1518 aa9.37□□□□□ -0.91
TPD52-214ENST00000520741 CADPSQ9ULU8 1353 aa9.36□□□□□ -0.91
TPD52-214ENST00000520741 CEP164Q9UPV0 1460 aa9.33□□□□□ -0.92
TPD52-214ENST00000520741 FANCD2Q9BXW9 1451 aa9.29□□□□□ -0.92
TPD52-214ENST00000520741 PRDM2Q13029 1718 aa9.28□□□□□ -0.92
TPD52-214ENST00000520741 CFTRP13569 1480 aa9.23□□□□□ -0.93
TPD52-214ENST00000520741 URB2Q14146 1524 aaKnown RBP9.23□□□□□ -0.93
TPD52-214ENST00000520741 TOP2AP11388 1531 aaKnown RBP9.22□□□□□ -0.93
TPD52-214ENST00000520741 OSCARQ8IYS5 282 aa9.22□□□□□ -0.93
TPD52-214ENST00000520741 RIMBP3CA6NJZ7 1639 aa9.2□□□□□ -0.94
TPD52-214ENST00000520741 RIMBP3BA6NNM3 1639 aa9.2□□□□□ -0.94
TPD52-214ENST00000520741 RIMBP3Q9UFD9 1639 aa9.2□□□□□ -0.94
TPD52-214ENST00000520741 RSF1Q96T23 1441 aaPredicted RBP9.18□□□□□ -0.94
TPD52-214ENST00000520741 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.95
TPD52-214ENST00000520741 CHD1O14646 1710 aa9.14□□□□□ -0.95
TPD52-214ENST00000520741 EIF4G3O43432 1585 aaKnown RBP9.13□□□□□ -0.95
TPD52-214ENST00000520741 ARHGEF11O15085 1522 aa9.12□□□□□ -0.95
TPD52-214ENST00000520741 IFT140Q96RY7 1462 aa9.12□□□□□ -0.95
TPD52-214ENST00000520741 TOPBP1Q92547 1522 aa9.1□□□□□ -0.95
TPD52-214ENST00000520741 CCDC88BA6NC98 1476 aa9.1□□□□□ -0.95
TPD52-214ENST00000520741 DNMBPQ6XZF7 1577 aa9.07□□□□□ -0.96
TPD52-214ENST00000520741 TARBP1Q13395 1621 aaKnown RBP9.06□□□□□ -0.96
TPD52-214ENST00000520741 ABCC8Q09428 1581 aa9.04□□□□□ -0.96
TPD52-214ENST00000520741 CYB5RLQ6IPT4 315 aa9.04□□□□□ -0.96
TPD52-214ENST00000520741 AQRO60306 1485 aaKnown RBP eCLIP9.03□□□□□ -0.96
TPD52-214ENST00000520741 FBLN2P98095 1184 aa9.02□□□□□ -0.97
TPD52-214ENST00000520741 ARAP1Q96P48 1450 aa9.02□□□□□ -0.97
TPD52-214ENST00000520741 TRHP20396 242 aaPredicted RBP9.01□□□□□ -0.97
TPD52-214ENST00000520741 POLA1P09884 1462 aaPredicted RBP9□□□□□ -0.97
TPD52-214ENST00000520741 RAD54L2Q9Y4B4 1467 aa8.98□□□□□ -0.97
TPD52-214ENST00000520741 SNAPC4Q5SXM2 1469 aa8.96□□□□□ -0.98
TPD52-214ENST00000520741 PBRM1Q86U86 1689 aa8.95□□□□□ -0.98
TPD52-214ENST00000520741 TDRD9Q8NDG6 1382 aaKnown RBP8.95□□□□□ -0.98
TPD52-214ENST00000520741 CLASP1Q7Z460 1538 aa8.95□□□□□ -0.98
TPD52-214ENST00000520741 SOGA1O94964 1423 aa8.94□□□□□ -0.98
TPD52-214ENST00000520741 FGD5Q6ZNL6 1462 aa8.94□□□□□ -0.98
TPD52-214ENST00000520741 SYNJ1O43426 1573 aa8.94□□□□□ -0.98
TPD52-214ENST00000520741 WDR97A6NE52 1622 aa8.93□□□□□ -0.98
TPD52-214ENST00000520741 CUX1P39880 1505 aa8.91□□□□□ -0.98
TPD52-214ENST00000520741 MAGI1Q96QZ7 1491 aaPredicted RBP8.89□□□□□ -0.99
TPD52-214ENST00000520741 CHMP7Q8WUX9 453 aaPredicted RBP8.89□□□□□ -0.99
TPD52-214ENST00000520741 GRIN2BQ13224 1484 aa8.88□□□□□ -0.99
TPD52-214ENST00000520741 SYNJ2O15056 1496 aa8.87□□□□□ -0.99
TPD52-214ENST00000520741 ABCA5Q8WWZ7 1642 aa8.85□□□□□ -0.99
TPD52-214ENST00000520741 AEBP2Q6ZN18 517 aaPredicted RBP8.85□□□□□ -0.99
TPD52-214ENST00000520741 GAPVD1Q14C86 1478 aa8.84□□□□□ -0.99
TPD52-214ENST00000520741 ERCC6L2Q5T890 1561 aa8.82□□□□□ -1
TPD52-214ENST00000520741 ADAMTS12P58397 1594 aa8.8□□□□□ -1
TPD52-214ENST00000520741 ABCA10Q8WWZ4 1543 aa8.8□□□□□ -1
TPD52-214ENST00000520741 CEP170Q5SW79 1584 aa8.79□□□□□ -1
TPD52-214ENST00000520741 KIF13AQ9H1H9 1805 aa8.79□□□□□ -1
TPD52-214ENST00000520741 GRIN2AQ12879 1464 aa8.78□□□□□ -1
TPD52-214ENST00000520741 SUPT5HO00267 1087 aaKnown RBP8.78□□□□□ -1
TPD52-214ENST00000520741 SHROOM2Q13796 1616 aa8.76□□□□□ -1.01
TPD52-214ENST00000520741 BIVM-ERCC5R4GMW8 1640 aa8.76□□□□□ -1.01
TPD52-214ENST00000520741 NUP160Q12769 1436 aa8.73□□□□□ -1.01
TPD52-214ENST00000520741 TOP2BQ02880 1626 aa8.72□□□□□ -1.01
TPD52-214ENST00000520741 WRNQ14191 1432 aaPredicted RBP eCLIP8.72□□□□□ -1.01
TPD52-214ENST00000520741 TSPOAP1O95153 1857 aa8.7□□□□□ -1.02
TPD52-214ENST00000520741 FHAD1B1AJZ9 1412 aa8.7□□□□□ -1.02
TPD52-214ENST00000520741 ERICH3Q5RHP9 1530 aa8.69□□□□□ -1.02
TPD52-214ENST00000520741 PRG4Q92954 1404 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms