RNA–Protein interactions for RNA: ENST00000520724.5

RUNX1T1-227, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 2 BASIC

Gene RUNX1T1, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-227ENST00000520724 NISCHQ9Y2I1 1504 aa25.43■■□□□ 1.66
RUNX1T1-227ENST00000520724 ABCC9O60706 1549 aa23.16■■□□□ 1.3
RUNX1T1-227ENST00000520724 CCDC180Q9P1Z9 1646 aa22.75■■□□□ 1.23
RUNX1T1-227ENST00000520724 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
RUNX1T1-227ENST00000520724 RB1CC1Q8TDY2 1594 aa21.82■■□□□ 1.08
RUNX1T1-227ENST00000520724 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
RUNX1T1-227ENST00000520724 NACADO15069 1562 aa21.63■■□□□ 1.05
RUNX1T1-227ENST00000520724 PABPN1Q86U42 306 aaKnown RBP eCLIP21.62■■□□□ 1.05
RUNX1T1-227ENST00000520724 UNC13AQ9UPW8 1703 aa21.31■■□□□ 1
RUNX1T1-227ENST00000520724 BICRAQ9NZM4 1560 aa21.27■■□□□ 1
RUNX1T1-227ENST00000520724 MYO15BQ96JP2 1530 aa21.25■□□□□ 0.99
RUNX1T1-227ENST00000520724 ZCCHC6Q5VYS8 1495 aaKnown RBP21.01■□□□□ 0.95
RUNX1T1-227ENST00000520724 DCAF1Q9Y4B6 1507 aa20.92■□□□□ 0.94
RUNX1T1-227ENST00000520724 SCRIBQ14160 1630 aa20.85■□□□□ 0.93
RUNX1T1-227ENST00000520724 CECR2Q9BXF3 1484 aa20.84■□□□□ 0.93
RUNX1T1-227ENST00000520724 CC2D2AQ9P2K1 1620 aa20.84■□□□□ 0.93
RUNX1T1-227ENST00000520724 SHROOM4Q9ULL8 1493 aa20.83■□□□□ 0.92
RUNX1T1-227ENST00000520724 EIF4G1Q04637 1599 aaKnown RBP20.74■□□□□ 0.91
RUNX1T1-227ENST00000520724 PELP1Q8IZL8 1130 aaKnown RBP20.47■□□□□ 0.87
RUNX1T1-227ENST00000520724 DNAJC5Q9H3Z4 198 aa20.3■□□□□ 0.84
RUNX1T1-227ENST00000520724 MYT1Q01538 1121 aa20.24■□□□□ 0.83
RUNX1T1-227ENST00000520724 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
RUNX1T1-227ENST00000520724 ATAD2BQ9ULI0 1458 aa19.97■□□□□ 0.79
RUNX1T1-227ENST00000520724 ERCC6Q03468 1493 aa19.95■□□□□ 0.78
RUNX1T1-227ENST00000520724 CUX2O14529 1486 aa19.93■□□□□ 0.78
RUNX1T1-227ENST00000520724 NESP48681 1621 aa19.86■□□□□ 0.77
RUNX1T1-227ENST00000520724 SMARCA4P51532 1647 aa19.83■□□□□ 0.77
RUNX1T1-227ENST00000520724 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
RUNX1T1-227ENST00000520724 HMGXB3Q12766 1538 aa19.8■□□□□ 0.76
RUNX1T1-227ENST00000520724 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
RUNX1T1-227ENST00000520724 BAZ1AQ9NRL2 1556 aaPredicted RBP19.7■□□□□ 0.74
RUNX1T1-227ENST00000520724 MROH2BQ7Z745 1585 aa19.64■□□□□ 0.73
RUNX1T1-227ENST00000520724 PEG3Q9GZU2 1588 aa19.63■□□□□ 0.73
RUNX1T1-227ENST00000520724 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
RUNX1T1-227ENST00000520724 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
RUNX1T1-227ENST00000520724 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
RUNX1T1-227ENST00000520724 PDS5BQ9NTI5 1447 aa19.5■□□□□ 0.71
RUNX1T1-227ENST00000520724 KIF21AQ7Z4S6 1674 aa19.47■□□□□ 0.71
RUNX1T1-227ENST00000520724 CADPSQ9ULU8 1353 aa19.46■□□□□ 0.71
RUNX1T1-227ENST00000520724 WIZO95785 1651 aa19.36■□□□□ 0.69
RUNX1T1-227ENST00000520724 TRIM41Q8WV44 630 aa19.34■□□□□ 0.69
RUNX1T1-227ENST00000520724 MRC2Q9UBG0 1479 aa19.33■□□□□ 0.68
RUNX1T1-227ENST00000520724 WDR62O43379 1518 aa19.27■□□□□ 0.68
RUNX1T1-227ENST00000520724 FANCD2Q9BXW9 1451 aa19.21■□□□□ 0.67
RUNX1T1-227ENST00000520724 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.67
RUNX1T1-227ENST00000520724 RSF1Q96T23 1441 aaPredicted RBP19.18■□□□□ 0.66
RUNX1T1-227ENST00000520724 CFTRP13569 1480 aa19.17■□□□□ 0.66
RUNX1T1-227ENST00000520724 OSCARQ8IYS5 282 aa19.11■□□□□ 0.65
RUNX1T1-227ENST00000520724 URB2Q14146 1524 aaKnown RBP19.08■□□□□ 0.65
RUNX1T1-227ENST00000520724 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
RUNX1T1-227ENST00000520724 CCDC88BA6NC98 1476 aa18.93■□□□□ 0.62
RUNX1T1-227ENST00000520724 ZNF608Q9ULD9 1512 aaPredicted RBP18.92■□□□□ 0.62
RUNX1T1-227ENST00000520724 SLC24A1O60721 1099 aa18.91■□□□□ 0.62
RUNX1T1-227ENST00000520724 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
RUNX1T1-227ENST00000520724 TOPBP1Q92547 1522 aa18.82■□□□□ 0.6
RUNX1T1-227ENST00000520724 RIMBP3CA6NJZ7 1639 aa18.79■□□□□ 0.6
RUNX1T1-227ENST00000520724 RIMBP3BA6NNM3 1639 aa18.79■□□□□ 0.6
RUNX1T1-227ENST00000520724 RIMBP3Q9UFD9 1639 aa18.79■□□□□ 0.6
RUNX1T1-227ENST00000520724 PRDM2Q13029 1718 aa18.76■□□□□ 0.59
RUNX1T1-227ENST00000520724 PRKCSHP14314 528 aaPredicted RBP18.76■□□□□ 0.59
RUNX1T1-227ENST00000520724 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
RUNX1T1-227ENST00000520724 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.59
RUNX1T1-227ENST00000520724 CYB5RLQ6IPT4 315 aa18.73■□□□□ 0.59
RUNX1T1-227ENST00000520724 HRCP23327 699 aa18.71■□□□□ 0.59
RUNX1T1-227ENST00000520724 ABCC8Q09428 1581 aa18.7■□□□□ 0.58
RUNX1T1-227ENST00000520724 EIF4G3O43432 1585 aaKnown RBP18.69■□□□□ 0.58
RUNX1T1-227ENST00000520724 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
RUNX1T1-227ENST00000520724 FBLN2P98095 1184 aa18.67■□□□□ 0.58
RUNX1T1-227ENST00000520724 TARBP1Q13395 1621 aaKnown RBP18.64■□□□□ 0.57
RUNX1T1-227ENST00000520724 POLA1P09884 1462 aaPredicted RBP18.62■□□□□ 0.57
RUNX1T1-227ENST00000520724 RAD54L2Q9Y4B4 1467 aa18.61■□□□□ 0.57
RUNX1T1-227ENST00000520724 TDRD9Q8NDG6 1382 aaKnown RBP18.6■□□□□ 0.57
RUNX1T1-227ENST00000520724 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
RUNX1T1-227ENST00000520724 ARAP1Q96P48 1450 aa18.57■□□□□ 0.56
RUNX1T1-227ENST00000520724 CHD1O14646 1710 aa18.56■□□□□ 0.56
RUNX1T1-227ENST00000520724 SOGA1O94964 1423 aa18.56■□□□□ 0.56
RUNX1T1-227ENST00000520724 TRHP20396 242 aaPredicted RBP18.55■□□□□ 0.56
RUNX1T1-227ENST00000520724 APLP2Q06481 763 aa18.53■□□□□ 0.56
RUNX1T1-227ENST00000520724 FGD5Q6ZNL6 1462 aa18.47■□□□□ 0.55
RUNX1T1-227ENST00000520724 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
RUNX1T1-227ENST00000520724 SNAPC4Q5SXM2 1469 aa18.47■□□□□ 0.55
RUNX1T1-227ENST00000520724 CUX1P39880 1505 aa18.44■□□□□ 0.54
RUNX1T1-227ENST00000520724 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.53
RUNX1T1-227ENST00000520724 GRIN2BQ13224 1484 aa18.37■□□□□ 0.53
RUNX1T1-227ENST00000520724 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
RUNX1T1-227ENST00000520724 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
RUNX1T1-227ENST00000520724 SYNJ2O15056 1496 aa18.33■□□□□ 0.53
RUNX1T1-227ENST00000520724 WDR97A6NE52 1622 aa18.32■□□□□ 0.52
RUNX1T1-227ENST00000520724 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
RUNX1T1-227ENST00000520724 GAPVD1Q14C86 1478 aa18.3■□□□□ 0.52
RUNX1T1-227ENST00000520724 BCL11AQ9H165 835 aa18.29■□□□□ 0.52
RUNX1T1-227ENST00000520724 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
RUNX1T1-227ENST00000520724 ABCA10Q8WWZ4 1543 aa18.23■□□□□ 0.51
RUNX1T1-227ENST00000520724 PBRM1Q86U86 1689 aa18.2■□□□□ 0.5
RUNX1T1-227ENST00000520724 ABCA5Q8WWZ7 1642 aa18.18■□□□□ 0.5
RUNX1T1-227ENST00000520724 ERCC6L2Q5T890 1561 aa18.17■□□□□ 0.5
RUNX1T1-227ENST00000520724 GRIN2AQ12879 1464 aa18.14■□□□□ 0.49
RUNX1T1-227ENST00000520724 WRNQ14191 1432 aaPredicted RBP eCLIP18.14■□□□□ 0.49
RUNX1T1-227ENST00000520724 AEBP2Q6ZN18 517 aaPredicted RBP18.11■□□□□ 0.49
RUNX1T1-227ENST00000520724 NUP160Q12769 1436 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms