RNA–Protein interactions for RNA: ENST00000520679.1

EXTL3-207, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-207ENST00000520679 NISCHQ9Y2I1 1504 aa31.9■■■□□ 2.7
EXTL3-207ENST00000520679 CCDC180Q9P1Z9 1646 aa27.85■■■□□ 2.05
EXTL3-207ENST00000520679 ZCCHC6Q5VYS8 1495 aaKnown RBP26.86■■□□□ 1.89
EXTL3-207ENST00000520679 DCAF1Q9Y4B6 1507 aa26.52■■□□□ 1.84
EXTL3-207ENST00000520679 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
EXTL3-207ENST00000520679 ABCC9O60706 1549 aa25.94■■□□□ 1.74
EXTL3-207ENST00000520679 DCAF8L2P0C7V8 631 aa25.94■■□□□ 1.74
EXTL3-207ENST00000520679 NACADO15069 1562 aa25.87■■□□□ 1.73
EXTL3-207ENST00000520679 SHROOM4Q9ULL8 1493 aa25.82■■□□□ 1.72
EXTL3-207ENST00000520679 RB1CC1Q8TDY2 1594 aa25.57■■□□□ 1.68
EXTL3-207ENST00000520679 SCRIBQ14160 1630 aa25.43■■□□□ 1.66
EXTL3-207ENST00000520679 UNC13AQ9UPW8 1703 aa25.02■■□□□ 1.6
EXTL3-207ENST00000520679 SUPT5HO00267 1087 aaKnown RBP24.92■■□□□ 1.58
EXTL3-207ENST00000520679 BICRAQ9NZM4 1560 aa24.77■■□□□ 1.56
EXTL3-207ENST00000520679 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
EXTL3-207ENST00000520679 CECR2Q9BXF3 1484 aa24.66■■□□□ 1.54
EXTL3-207ENST00000520679 BAZ1AQ9NRL2 1556 aaPredicted RBP24.64■■□□□ 1.54
EXTL3-207ENST00000520679 MROH2BQ7Z745 1585 aa24.58■■□□□ 1.52
EXTL3-207ENST00000520679 SMARCA4P51532 1647 aa24.49■■□□□ 1.51
EXTL3-207ENST00000520679 PABPN1Q86U42 306 aaKnown RBP eCLIP24.41■■□□□ 1.5
EXTL3-207ENST00000520679 WIZO95785 1651 aa24.37■■□□□ 1.49
EXTL3-207ENST00000520679 PEG3Q9GZU2 1588 aa24.29■■□□□ 1.48
EXTL3-207ENST00000520679 TOP2AP11388 1531 aaKnown RBP24.23■■□□□ 1.47
EXTL3-207ENST00000520679 SMARCA2P51531 1590 aa24.08■■□□□ 1.44
EXTL3-207ENST00000520679 CHIC1Q5VXU3 224 aa24.07■■□□□ 1.44
EXTL3-207ENST00000520679 ATAD2BQ9ULI0 1458 aa24.03■■□□□ 1.44
EXTL3-207ENST00000520679 EIF4G1Q04637 1599 aaKnown RBP24■■□□□ 1.43
EXTL3-207ENST00000520679 DNAJC5BQ9UF47 199 aa23.95■■□□□ 1.42
EXTL3-207ENST00000520679 CCDC88BA6NC98 1476 aa23.89■■□□□ 1.42
EXTL3-207ENST00000520679 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
EXTL3-207ENST00000520679 HMGXB3Q12766 1538 aa23.87■■□□□ 1.41
EXTL3-207ENST00000520679 NCAPD3P42695 1498 aa23.85■■□□□ 1.41
EXTL3-207ENST00000520679 CC2D2AQ9P2K1 1620 aa23.58■■□□□ 1.36
EXTL3-207ENST00000520679 TRIM41Q8WV44 630 aa23.52■■□□□ 1.36
EXTL3-207ENST00000520679 ABCC8Q09428 1581 aa23.37■■□□□ 1.33
EXTL3-207ENST00000520679 CFTRP13569 1480 aa23.34■■□□□ 1.33
EXTL3-207ENST00000520679 PRDM2Q13029 1718 aa23.3■■□□□ 1.32
EXTL3-207ENST00000520679 WRNQ14191 1432 aaPredicted RBP eCLIP23.29■■□□□ 1.32
EXTL3-207ENST00000520679 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
EXTL3-207ENST00000520679 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
EXTL3-207ENST00000520679 EEA1Q15075 1411 aa23.16■■□□□ 1.3
EXTL3-207ENST00000520679 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
EXTL3-207ENST00000520679 BIVM-ERCC5R4GMW8 1640 aa23.15■■□□□ 1.3
EXTL3-207ENST00000520679 LAMC3Q9Y6N6 1575 aa23.02■■□□□ 1.28
EXTL3-207ENST00000520679 LOC105371045A0A1W2PR82 267 aa23.01■■□□□ 1.27
EXTL3-207ENST00000520679 CUX1P39880 1505 aa22.99■■□□□ 1.27
EXTL3-207ENST00000520679 SOGA1O94964 1423 aa22.96■■□□□ 1.27
EXTL3-207ENST00000520679 FAM9AQ8IZU1 332 aaPredicted RBP22.95■■□□□ 1.26
EXTL3-207ENST00000520679 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
EXTL3-207ENST00000520679 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
EXTL3-207ENST00000520679 RUSC2Q8N2Y8 1516 aa22.85■■□□□ 1.25
EXTL3-207ENST00000520679 NESP48681 1621 aa22.82■■□□□ 1.24
EXTL3-207ENST00000520679 KIF21BO75037 1637 aa22.82■■□□□ 1.24
EXTL3-207ENST00000520679 DNMBPQ6XZF7 1577 aa22.8■■□□□ 1.24
EXTL3-207ENST00000520679 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
EXTL3-207ENST00000520679 CEP164Q9UPV0 1460 aa22.77■■□□□ 1.24
EXTL3-207ENST00000520679 GOLGA3Q08378 1498 aa22.75■■□□□ 1.23
EXTL3-207ENST00000520679 TNIKQ9UKE5 1360 aa22.71■■□□□ 1.23
EXTL3-207ENST00000520679 KIF27Q86VH2 1401 aa22.71■■□□□ 1.23
EXTL3-207ENST00000520679 FGD5Q6ZNL6 1462 aa22.71■■□□□ 1.23
EXTL3-207ENST00000520679 TOPBP1Q92547 1522 aa22.7■■□□□ 1.22
EXTL3-207ENST00000520679 ERICH3Q5RHP9 1530 aa22.65■■□□□ 1.22
EXTL3-207ENST00000520679 KIF21AQ7Z4S6 1674 aa22.63■■□□□ 1.21
EXTL3-207ENST00000520679 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
EXTL3-207ENST00000520679 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
EXTL3-207ENST00000520679 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
EXTL3-207ENST00000520679 ABCA10Q8WWZ4 1543 aa22.58■■□□□ 1.21
EXTL3-207ENST00000520679 CUX2O14529 1486 aa22.56■■□□□ 1.2
EXTL3-207ENST00000520679 CEP162Q5TB80 1403 aa22.54■■□□□ 1.2
EXTL3-207ENST00000520679 RAPGEF2Q9Y4G8 1499 aa22.53■■□□□ 1.2
EXTL3-207ENST00000520679 WDR97A6NE52 1622 aa22.52■■□□□ 1.2
EXTL3-207ENST00000520679 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
EXTL3-207ENST00000520679 EHMT2Q96KQ7 1210 aa22.48■■□□□ 1.19
EXTL3-207ENST00000520679 UBTFP17480 764 aaKnown RBP22.47■■□□□ 1.19
EXTL3-207ENST00000520679 IGF1RP08069 1367 aa22.46■■□□□ 1.19
EXTL3-207ENST00000520679 RAD54L2Q9Y4B4 1467 aa22.44■■□□□ 1.18
EXTL3-207ENST00000520679 WDR62O43379 1518 aa22.41■■□□□ 1.18
EXTL3-207ENST00000520679 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.18
EXTL3-207ENST00000520679 CUL7Q14999 1698 aa22.39■■□□□ 1.17
EXTL3-207ENST00000520679 TARBP1Q13395 1621 aaKnown RBP22.38■■□□□ 1.17
EXTL3-207ENST00000520679 CLIP1P30622 1438 aa22.34■■□□□ 1.17
EXTL3-207ENST00000520679 CARMIL1Q5VZK9 1371 aa22.34■■□□□ 1.17
EXTL3-207ENST00000520679 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
EXTL3-207ENST00000520679 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
EXTL3-207ENST00000520679 GAPVD1Q14C86 1478 aa22.27■■□□□ 1.16
EXTL3-207ENST00000520679 IFT140Q96RY7 1462 aa22.27■■□□□ 1.16
EXTL3-207ENST00000520679 TRIM26Q12899 539 aaPredicted RBP22.22■■□□□ 1.15
EXTL3-207ENST00000520679 VPS8Q8N3P4 1428 aa22.22■■□□□ 1.15
EXTL3-207ENST00000520679 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
EXTL3-207ENST00000520679 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
EXTL3-207ENST00000520679 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
EXTL3-207ENST00000520679 CTTNBP2Q8WZ74 1663 aa22.11■■□□□ 1.13
EXTL3-207ENST00000520679 PCGF6Q9BYE7 350 aa22.11■■□□□ 1.13
EXTL3-207ENST00000520679 GRIN2BQ13224 1484 aa22.1■■□□□ 1.13
EXTL3-207ENST00000520679 ARHGAP35Q9NRY4 1499 aa22.09■■□□□ 1.13
EXTL3-207ENST00000520679 ADAMTS12P58397 1594 aa22.08■■□□□ 1.13
EXTL3-207ENST00000520679 FHAD1B1AJZ9 1412 aa22.07■■□□□ 1.12
EXTL3-207ENST00000520679 DNAJC5Q9H3Z4 198 aa22.07■■□□□ 1.12
EXTL3-207ENST00000520679 EFCAB5A4FU69 1503 aa22.06■■□□□ 1.12
EXTL3-207ENST00000520679 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms