RNA–Protein interactions for RNA: ENST00000520614.1

PDP1-207, Transcript of pyruvate dehyrogenase phosphatase catalytic subunit 1, humanhuman

TSL 4

Gene PDP1, Length 341 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDP1-207ENST00000520614 NISCHQ9Y2I1 1504 aa54.3■■■■■ 6.28
PDP1-207ENST00000520614 ABCC9O60706 1549 aa49.26■■■■■ 5.48
PDP1-207ENST00000520614 CCDC180Q9P1Z9 1646 aa48.98■■■■■ 5.43
PDP1-207ENST00000520614 RB1CC1Q8TDY2 1594 aa46.79■■■■■ 5.08
PDP1-207ENST00000520614 DNAJC5BQ9UF47 199 aa46.53■■■■■ 5.04
PDP1-207ENST00000520614 NACADO15069 1562 aa46.38■■■■■ 5.01
PDP1-207ENST00000520614 DCAF8L2P0C7V8 631 aa45.9■■■■■ 4.94
PDP1-207ENST00000520614 PABPN1Q86U42 306 aaKnown RBP eCLIP45.75■■■■■ 4.91
PDP1-207ENST00000520614 UNC13AQ9UPW8 1703 aa45.73■■■■■ 4.91
PDP1-207ENST00000520614 MYO15BQ96JP2 1530 aa45.63■■■■■ 4.9
PDP1-207ENST00000520614 BICRAQ9NZM4 1560 aa45.41■■■■■ 4.86
PDP1-207ENST00000520614 ZCCHC6Q5VYS8 1495 aaKnown RBP44.93■■■■■ 4.78
PDP1-207ENST00000520614 DCAF1Q9Y4B6 1507 aa44.88■■■■■ 4.78
PDP1-207ENST00000520614 SHROOM4Q9ULL8 1493 aa44.85■■■■■ 4.77
PDP1-207ENST00000520614 CC2D2AQ9P2K1 1620 aa44.53■■■■■ 4.72
PDP1-207ENST00000520614 SCRIBQ14160 1630 aa44.52■■■■■ 4.72
PDP1-207ENST00000520614 CECR2Q9BXF3 1484 aa44.46■■■■■ 4.71
PDP1-207ENST00000520614 EIF4G1Q04637 1599 aaKnown RBP44.34■■■■■ 4.69
PDP1-207ENST00000520614 DNAJC5Q9H3Z4 198 aa43.09■■■■■ 4.49
PDP1-207ENST00000520614 NCAPD3P42695 1498 aa42.8■■■■■ 4.44
PDP1-207ENST00000520614 CUX2O14529 1486 aa42.71■■■■■ 4.43
PDP1-207ENST00000520614 ERCC6Q03468 1493 aa42.6■■■■■ 4.41
PDP1-207ENST00000520614 ATAD2BQ9ULI0 1458 aa42.59■■■■■ 4.41
PDP1-207ENST00000520614 SMARCA2P51531 1590 aa42.49■■■■■ 4.39
PDP1-207ENST00000520614 HMGXB3Q12766 1538 aa42.47■■■■■ 4.39
PDP1-207ENST00000520614 SMARCA4P51532 1647 aa42.46■■■■■ 4.39
PDP1-207ENST00000520614 BAZ1AQ9NRL2 1556 aaPredicted RBP42.2■■■■■ 4.35
PDP1-207ENST00000520614 NESP48681 1621 aa42.2■■■■■ 4.35
PDP1-207ENST00000520614 BAZ1BQ9UIG0 1483 aaKnown RBP42.16■■■■■ 4.34
PDP1-207ENST00000520614 PEG3Q9GZU2 1588 aa42.08■■■■■ 4.33
PDP1-207ENST00000520614 THOC2Q8NI27 1593 aaKnown RBP41.93■■■■■ 4.3
PDP1-207ENST00000520614 LAMC3Q9Y6N6 1575 aa41.92■■■■■ 4.3
PDP1-207ENST00000520614 MROH2BQ7Z745 1585 aa41.81■■■■■ 4.28
PDP1-207ENST00000520614 KIF21AQ7Z4S6 1674 aa41.7■■■■■ 4.27
PDP1-207ENST00000520614 PDS5BQ9NTI5 1447 aa41.67■■■■■ 4.26
PDP1-207ENST00000520614 CADPSQ9ULU8 1353 aa41.46■■■■■ 4.23
PDP1-207ENST00000520614 MRC2Q9UBG0 1479 aa41.34■■■■■ 4.21
PDP1-207ENST00000520614 WIZO95785 1651 aa41.29■■■■■ 4.2
PDP1-207ENST00000520614 WDR62O43379 1518 aa41.26■■■■■ 4.2
PDP1-207ENST00000520614 CEP164Q9UPV0 1460 aa41.09■■■■■ 4.17
PDP1-207ENST00000520614 FANCD2Q9BXW9 1451 aa40.99■■■■■ 4.15
PDP1-207ENST00000520614 TRIM41Q8WV44 630 aa40.97■■■■■ 4.15
PDP1-207ENST00000520614 CFTRP13569 1480 aa40.91■■■■■ 4.14
PDP1-207ENST00000520614 RSF1Q96T23 1441 aaPredicted RBP40.79■■■■■ 4.12
PDP1-207ENST00000520614 TOP2AP11388 1531 aaKnown RBP40.78■■■■■ 4.12
PDP1-207ENST00000520614 URB2Q14146 1524 aaKnown RBP40.67■■■■■ 4.1
PDP1-207ENST00000520614 OSCARQ8IYS5 282 aa40.63■■■■■ 4.09
PDP1-207ENST00000520614 PRDM2Q13029 1718 aa40.54■■■■■ 4.08
PDP1-207ENST00000520614 IFT140Q96RY7 1462 aa40.29■■■■■ 4.04
PDP1-207ENST00000520614 CCDC88BA6NC98 1476 aa40.28■■■■■ 4.04
PDP1-207ENST00000520614 ZNF608Q9ULD9 1512 aaPredicted RBP40.21■■■■■ 4.03
PDP1-207ENST00000520614 RIMBP3CA6NJZ7 1639 aa40.18■■■■■ 4.02
PDP1-207ENST00000520614 RIMBP3BA6NNM3 1639 aa40.18■■■■■ 4.02
PDP1-207ENST00000520614 RIMBP3Q9UFD9 1639 aa40.18■■■■■ 4.02
PDP1-207ENST00000520614 TOPBP1Q92547 1522 aa40.17■■■■■ 4.02
PDP1-207ENST00000520614 ABCC8Q09428 1581 aa40.1■■■■■ 4.01
PDP1-207ENST00000520614 EIF4G3O43432 1585 aaKnown RBP40.01■■■■■ 4
PDP1-207ENST00000520614 DNMBPQ6XZF7 1577 aa40.01■■■■■ 4
PDP1-207ENST00000520614 ARHGEF11O15085 1522 aa40.01■■■■□ 3.99
PDP1-207ENST00000520614 TARBP1Q13395 1621 aaKnown RBP39.86■■■■□ 3.97
PDP1-207ENST00000520614 CHD1O14646 1710 aa39.81■■■■□ 3.96
PDP1-207ENST00000520614 AQRO60306 1485 aaKnown RBP eCLIP39.8■■■■□ 3.96
PDP1-207ENST00000520614 POLA1P09884 1462 aaPredicted RBP39.73■■■■□ 3.95
PDP1-207ENST00000520614 CYB5RLQ6IPT4 315 aa39.66■■■■□ 3.94
PDP1-207ENST00000520614 FBLN2P98095 1184 aa39.58■■■■□ 3.93
PDP1-207ENST00000520614 ARAP1Q96P48 1450 aa39.57■■■■□ 3.93
PDP1-207ENST00000520614 RAD54L2Q9Y4B4 1467 aa39.56■■■■□ 3.92
PDP1-207ENST00000520614 SOGA1O94964 1423 aa39.52■■■■□ 3.92
PDP1-207ENST00000520614 WDR97A6NE52 1622 aa39.5■■■■□ 3.91
PDP1-207ENST00000520614 TDRD9Q8NDG6 1382 aaKnown RBP39.46■■■■□ 3.91
PDP1-207ENST00000520614 FGD5Q6ZNL6 1462 aa39.42■■■■□ 3.9
PDP1-207ENST00000520614 SNAPC4Q5SXM2 1469 aa39.41■■■■□ 3.9
PDP1-207ENST00000520614 TRHP20396 242 aaPredicted RBP39.36■■■■□ 3.89
PDP1-207ENST00000520614 CLASP1Q7Z460 1538 aa39.35■■■■□ 3.89
PDP1-207ENST00000520614 MAGI1Q96QZ7 1491 aaPredicted RBP39.32■■■■□ 3.89
PDP1-207ENST00000520614 CUX1P39880 1505 aa39.32■■■■□ 3.89
PDP1-207ENST00000520614 SYNJ1O43426 1573 aa39.29■■■■□ 3.88
PDP1-207ENST00000520614 GRIN2BQ13224 1484 aa39.26■■■■□ 3.88
PDP1-207ENST00000520614 CHMP7Q8WUX9 453 aaPredicted RBP39.26■■■■□ 3.88
PDP1-207ENST00000520614 SYNJ2O15056 1496 aa39.18■■■■□ 3.86
PDP1-207ENST00000520614 PBRM1Q86U86 1689 aa39.1■■■■□ 3.85
PDP1-207ENST00000520614 GAPVD1Q14C86 1478 aa39.05■■■■□ 3.84
PDP1-207ENST00000520614 ABCA10Q8WWZ4 1543 aa38.98■■■■□ 3.83
PDP1-207ENST00000520614 ABCA5Q8WWZ7 1642 aa38.96■■■■□ 3.83
PDP1-207ENST00000520614 GRIN2AQ12879 1464 aa38.75■■■■□ 3.79
PDP1-207ENST00000520614 WRNQ14191 1432 aaPredicted RBP eCLIP38.72■■■■□ 3.79
PDP1-207ENST00000520614 ADAMTS12P58397 1594 aa38.7■■■■□ 3.79
PDP1-207ENST00000520614 NUP160Q12769 1436 aa38.65■■■■□ 3.78
PDP1-207ENST00000520614 ERCC6L2Q5T890 1561 aa38.65■■■■□ 3.78
PDP1-207ENST00000520614 CEP170Q5SW79 1584 aa38.63■■■■□ 3.77
PDP1-207ENST00000520614 BIVM-ERCC5R4GMW8 1640 aa38.63■■■■□ 3.77
PDP1-207ENST00000520614 SUPT5HO00267 1087 aaKnown RBP38.61■■■■□ 3.77
PDP1-207ENST00000520614 TOP2BQ02880 1626 aa38.6■■■■□ 3.77
PDP1-207ENST00000520614 FHAD1B1AJZ9 1412 aa38.55■■■■□ 3.76
PDP1-207ENST00000520614 SHROOM2Q13796 1616 aa38.55■■■■□ 3.76
PDP1-207ENST00000520614 AEBP2Q6ZN18 517 aaPredicted RBP38.54■■■■□ 3.76
PDP1-207ENST00000520614 ERICH3Q5RHP9 1530 aa38.49■■■■□ 3.75
PDP1-207ENST00000520614 PRG4Q92954 1404 aaPredicted RBP38.28■■■■□ 3.72
PDP1-207ENST00000520614 KIF13AQ9H1H9 1805 aa38.24■■■■□ 3.71
PDP1-207ENST00000520614 JPH4Q96JJ6 628 aa38.2■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms