RNA–Protein interactions for RNA: ENST00000520600.1

CHRNA2-205, Transcript of cholinergic receptor nicotinic alpha 2 subunit, humanhuman

TSL 1 (best)

Gene CHRNA2, Length 1,468 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA2-205ENST00000520600 NISCHQ9Y2I1 1504 aa34.96■■■■□ 3.19
CHRNA2-205ENST00000520600 CCDC180Q9P1Z9 1646 aa31.27■■■□□ 2.6
CHRNA2-205ENST00000520600 ABCC9O60706 1549 aa30.92■■■□□ 2.54
CHRNA2-205ENST00000520600 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
CHRNA2-205ENST00000520600 NACADO15069 1562 aa29.46■■■□□ 2.31
CHRNA2-205ENST00000520600 DCAF8L2P0C7V8 631 aa29.37■■■□□ 2.29
CHRNA2-205ENST00000520600 MYO15BQ96JP2 1530 aa29.15■■■□□ 2.26
CHRNA2-205ENST00000520600 ZCCHC6Q5VYS8 1495 aaKnown RBP29.07■■■□□ 2.24
CHRNA2-205ENST00000520600 UNC13AQ9UPW8 1703 aa28.96■■■□□ 2.23
CHRNA2-205ENST00000520600 DCAF1Q9Y4B6 1507 aa28.9■■■□□ 2.22
CHRNA2-205ENST00000520600 PABPN1Q86U42 306 aaKnown RBP eCLIP28.83■■■□□ 2.21
CHRNA2-205ENST00000520600 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.18
CHRNA2-205ENST00000520600 DNAJC5BQ9UF47 199 aa28.66■■■□□ 2.18
CHRNA2-205ENST00000520600 SCRIBQ14160 1630 aa28.52■■■□□ 2.16
CHRNA2-205ENST00000520600 SHROOM4Q9ULL8 1493 aa28.36■■■□□ 2.13
CHRNA2-205ENST00000520600 EIF4G1Q04637 1599 aaKnown RBP27.98■■■□□ 2.07
CHRNA2-205ENST00000520600 CC2D2AQ9P2K1 1620 aa27.96■■■□□ 2.07
CHRNA2-205ENST00000520600 CECR2Q9BXF3 1484 aa27.82■■■□□ 2.04
CHRNA2-205ENST00000520600 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
CHRNA2-205ENST00000520600 NCAPD3P42695 1498 aa27.17■■□□□ 1.94
CHRNA2-205ENST00000520600 ATAD2BQ9ULI0 1458 aa27.15■■□□□ 1.94
CHRNA2-205ENST00000520600 BAZ1AQ9NRL2 1556 aaPredicted RBP27.14■■□□□ 1.93
CHRNA2-205ENST00000520600 SMARCA2P51531 1590 aa27.12■■□□□ 1.93
CHRNA2-205ENST00000520600 HMGXB3Q12766 1538 aa27.03■■□□□ 1.92
CHRNA2-205ENST00000520600 MROH2BQ7Z745 1585 aa26.95■■□□□ 1.9
CHRNA2-205ENST00000520600 PEG3Q9GZU2 1588 aa26.95■■□□□ 1.9
CHRNA2-205ENST00000520600 BAZ1BQ9UIG0 1483 aaKnown RBP26.92■■□□□ 1.9
CHRNA2-205ENST00000520600 ERCC6Q03468 1493 aa26.7■■□□□ 1.86
CHRNA2-205ENST00000520600 WIZO95785 1651 aa26.66■■□□□ 1.86
CHRNA2-205ENST00000520600 NESP48681 1621 aa26.65■■□□□ 1.86
CHRNA2-205ENST00000520600 LAMC3Q9Y6N6 1575 aa26.53■■□□□ 1.84
CHRNA2-205ENST00000520600 CUX2O14529 1486 aa26.52■■□□□ 1.84
CHRNA2-205ENST00000520600 RSF1Q96T23 1441 aaPredicted RBP26.5■■□□□ 1.83
CHRNA2-205ENST00000520600 PDS5BQ9NTI5 1447 aa26.37■■□□□ 1.81
CHRNA2-205ENST00000520600 CADPSQ9ULU8 1353 aa26.36■■□□□ 1.81
CHRNA2-205ENST00000520600 KIF21AQ7Z4S6 1674 aa26.36■■□□□ 1.81
CHRNA2-205ENST00000520600 TOP2AP11388 1531 aaKnown RBP26.35■■□□□ 1.81
CHRNA2-205ENST00000520600 THOC2Q8NI27 1593 aaKnown RBP26.34■■□□□ 1.81
CHRNA2-205ENST00000520600 CFTRP13569 1480 aa26.14■■□□□ 1.77
CHRNA2-205ENST00000520600 MRC2Q9UBG0 1479 aa26.12■■□□□ 1.77
CHRNA2-205ENST00000520600 CEP164Q9UPV0 1460 aa26.09■■□□□ 1.77
CHRNA2-205ENST00000520600 DNAJC5Q9H3Z4 198 aa26.09■■□□□ 1.77
CHRNA2-205ENST00000520600 FANCD2Q9BXW9 1451 aa26.08■■□□□ 1.77
CHRNA2-205ENST00000520600 WDR62O43379 1518 aa26.05■■□□□ 1.76
CHRNA2-205ENST00000520600 CCDC88BA6NC98 1476 aa26.02■■□□□ 1.76
CHRNA2-205ENST00000520600 PRDM2Q13029 1718 aa25.98■■□□□ 1.75
CHRNA2-205ENST00000520600 URB2Q14146 1524 aaKnown RBP25.84■■□□□ 1.73
CHRNA2-205ENST00000520600 TOPBP1Q92547 1522 aa25.63■■□□□ 1.69
CHRNA2-205ENST00000520600 SUPT5HO00267 1087 aaKnown RBP25.6■■□□□ 1.69
CHRNA2-205ENST00000520600 ABCC8Q09428 1581 aa25.59■■□□□ 1.69
CHRNA2-205ENST00000520600 DNMBPQ6XZF7 1577 aa25.58■■□□□ 1.68
CHRNA2-205ENST00000520600 IFT140Q96RY7 1462 aa25.55■■□□□ 1.68
CHRNA2-205ENST00000520600 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
CHRNA2-205ENST00000520600 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.66
CHRNA2-205ENST00000520600 EIF4G3O43432 1585 aaKnown RBP25.37■■□□□ 1.65
CHRNA2-205ENST00000520600 TARBP1Q13395 1621 aaKnown RBP25.37■■□□□ 1.65
CHRNA2-205ENST00000520600 OSCARQ8IYS5 282 aa25.34■■□□□ 1.65
CHRNA2-205ENST00000520600 CUX1P39880 1505 aa25.31■■□□□ 1.64
CHRNA2-205ENST00000520600 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
CHRNA2-205ENST00000520600 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.64
CHRNA2-205ENST00000520600 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
CHRNA2-205ENST00000520600 SOGA1O94964 1423 aa25.27■■□□□ 1.64
CHRNA2-205ENST00000520600 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
CHRNA2-205ENST00000520600 WDR97A6NE52 1622 aa25.16■■□□□ 1.62
CHRNA2-205ENST00000520600 CHD1O14646 1710 aa25.13■■□□□ 1.61
CHRNA2-205ENST00000520600 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
CHRNA2-205ENST00000520600 FBLN2P98095 1184 aa25.06■■□□□ 1.6
CHRNA2-205ENST00000520600 SNAPC4Q5SXM2 1469 aa25.05■■□□□ 1.6
CHRNA2-205ENST00000520600 GRIN2BQ13224 1484 aa25.02■■□□□ 1.6
CHRNA2-205ENST00000520600 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
CHRNA2-205ENST00000520600 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
CHRNA2-205ENST00000520600 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
CHRNA2-205ENST00000520600 WRNQ14191 1432 aaPredicted RBP eCLIP25.01■■□□□ 1.59
CHRNA2-205ENST00000520600 TOP2BQ02880 1626 aa25.01■■□□□ 1.59
CHRNA2-205ENST00000520600 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
CHRNA2-205ENST00000520600 ABCA10Q8WWZ4 1543 aa25.01■■□□□ 1.59
CHRNA2-205ENST00000520600 MAGI1Q96QZ7 1491 aaPredicted RBP24.99■■□□□ 1.59
CHRNA2-205ENST00000520600 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
CHRNA2-205ENST00000520600 SYNJ1O43426 1573 aa24.98■■□□□ 1.59
CHRNA2-205ENST00000520600 GAPVD1Q14C86 1478 aa24.98■■□□□ 1.59
CHRNA2-205ENST00000520600 ABCA5Q8WWZ7 1642 aa24.96■■□□□ 1.59
CHRNA2-205ENST00000520600 ARHGEF11O15085 1522 aa24.95■■□□□ 1.59
CHRNA2-205ENST00000520600 CHMP7Q8WUX9 453 aaPredicted RBP24.92■■□□□ 1.58
CHRNA2-205ENST00000520600 SYNJ2O15056 1496 aa24.9■■□□□ 1.58
CHRNA2-205ENST00000520600 CLASP1Q7Z460 1538 aa24.82■■□□□ 1.56
CHRNA2-205ENST00000520600 ADAMTS12P58397 1594 aa24.75■■□□□ 1.55
CHRNA2-205ENST00000520600 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
CHRNA2-205ENST00000520600 CYB5RLQ6IPT4 315 aa24.73■■□□□ 1.55
CHRNA2-205ENST00000520600 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
CHRNA2-205ENST00000520600 GRIN2AQ12879 1464 aa24.7■■□□□ 1.54
CHRNA2-205ENST00000520600 FHAD1B1AJZ9 1412 aa24.67■■□□□ 1.54
CHRNA2-205ENST00000520600 CEP170Q5SW79 1584 aa24.61■■□□□ 1.53
CHRNA2-205ENST00000520600 NUP160Q12769 1436 aa24.59■■□□□ 1.53
CHRNA2-205ENST00000520600 KIF27Q86VH2 1401 aa24.52■■□□□ 1.52
CHRNA2-205ENST00000520600 SHROOM2Q13796 1616 aa24.46■■□□□ 1.51
CHRNA2-205ENST00000520600 ERCC6L2Q5T890 1561 aa24.46■■□□□ 1.51
CHRNA2-205ENST00000520600 IGF1RP08069 1367 aa24.44■■□□□ 1.5
CHRNA2-205ENST00000520600 CUL7Q14999 1698 aa24.44■■□□□ 1.5
CHRNA2-205ENST00000520600 RUSC2Q8N2Y8 1516 aa24.39■■□□□ 1.5
CHRNA2-205ENST00000520600 TRHP20396 242 aaPredicted RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms