RNA–Protein interactions for RNA: ENST00000520480.5

R3HCC1-206, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 3

Gene R3HCC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-206ENST00000520480 NISCHQ9Y2I1 1504 aa35.28■■■■□ 3.24
R3HCC1-206ENST00000520480 CCDC180Q9P1Z9 1646 aa31.51■■■□□ 2.63
R3HCC1-206ENST00000520480 ABCC9O60706 1549 aa31.01■■■□□ 2.55
R3HCC1-206ENST00000520480 RB1CC1Q8TDY2 1594 aa29.77■■■□□ 2.36
R3HCC1-206ENST00000520480 NACADO15069 1562 aa29.67■■■□□ 2.34
R3HCC1-206ENST00000520480 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
R3HCC1-206ENST00000520480 MYO15BQ96JP2 1530 aa29.42■■■□□ 2.3
R3HCC1-206ENST00000520480 ZCCHC6Q5VYS8 1495 aaKnown RBP29.33■■■□□ 2.29
R3HCC1-206ENST00000520480 DCAF1Q9Y4B6 1507 aa29.2■■■□□ 2.26
R3HCC1-206ENST00000520480 UNC13AQ9UPW8 1703 aa29.07■■■□□ 2.24
R3HCC1-206ENST00000520480 PABPN1Q86U42 306 aaKnown RBP eCLIP28.92■■■□□ 2.22
R3HCC1-206ENST00000520480 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
R3HCC1-206ENST00000520480 SCRIBQ14160 1630 aa28.69■■■□□ 2.18
R3HCC1-206ENST00000520480 DNAJC5BQ9UF47 199 aa28.64■■■□□ 2.18
R3HCC1-206ENST00000520480 SHROOM4Q9ULL8 1493 aa28.57■■■□□ 2.16
R3HCC1-206ENST00000520480 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
R3HCC1-206ENST00000520480 CC2D2AQ9P2K1 1620 aa28.06■■■□□ 2.08
R3HCC1-206ENST00000520480 CECR2Q9BXF3 1484 aa27.91■■■□□ 2.06
R3HCC1-206ENST00000520480 SMARCA4P51532 1647 aa27.43■■□□□ 1.98
R3HCC1-206ENST00000520480 BAZ1AQ9NRL2 1556 aaPredicted RBP27.38■■□□□ 1.97
R3HCC1-206ENST00000520480 NCAPD3P42695 1498 aa27.37■■□□□ 1.97
R3HCC1-206ENST00000520480 ATAD2BQ9ULI0 1458 aa27.33■■□□□ 1.97
R3HCC1-206ENST00000520480 SMARCA2P51531 1590 aa27.32■■□□□ 1.96
R3HCC1-206ENST00000520480 HMGXB3Q12766 1538 aa27.21■■□□□ 1.95
R3HCC1-206ENST00000520480 PEG3Q9GZU2 1588 aa27.18■■□□□ 1.94
R3HCC1-206ENST00000520480 MROH2BQ7Z745 1585 aa27.16■■□□□ 1.94
R3HCC1-206ENST00000520480 BAZ1BQ9UIG0 1483 aaKnown RBP27.11■■□□□ 1.93
R3HCC1-206ENST00000520480 WIZO95785 1651 aa26.87■■□□□ 1.89
R3HCC1-206ENST00000520480 ERCC6Q03468 1493 aa26.78■■□□□ 1.88
R3HCC1-206ENST00000520480 RSF1Q96T23 1441 aaPredicted RBP26.77■■□□□ 1.88
R3HCC1-206ENST00000520480 NESP48681 1621 aa26.75■■□□□ 1.87
R3HCC1-206ENST00000520480 LAMC3Q9Y6N6 1575 aa26.7■■□□□ 1.86
R3HCC1-206ENST00000520480 TOP2AP11388 1531 aaKnown RBP26.59■■□□□ 1.85
R3HCC1-206ENST00000520480 CUX2O14529 1486 aa26.58■■□□□ 1.85
R3HCC1-206ENST00000520480 CADPSQ9ULU8 1353 aa26.55■■□□□ 1.84
R3HCC1-206ENST00000520480 PDS5BQ9NTI5 1447 aa26.53■■□□□ 1.84
R3HCC1-206ENST00000520480 KIF21AQ7Z4S6 1674 aa26.46■■□□□ 1.83
R3HCC1-206ENST00000520480 THOC2Q8NI27 1593 aaKnown RBP26.42■■□□□ 1.82
R3HCC1-206ENST00000520480 CFTRP13569 1480 aa26.35■■□□□ 1.81
R3HCC1-206ENST00000520480 CCDC88BA6NC98 1476 aa26.26■■□□□ 1.79
R3HCC1-206ENST00000520480 MRC2Q9UBG0 1479 aa26.26■■□□□ 1.79
R3HCC1-206ENST00000520480 FANCD2Q9BXW9 1451 aa26.24■■□□□ 1.79
R3HCC1-206ENST00000520480 CEP164Q9UPV0 1460 aa26.24■■□□□ 1.79
R3HCC1-206ENST00000520480 WDR62O43379 1518 aa26.19■■□□□ 1.78
R3HCC1-206ENST00000520480 PRDM2Q13029 1718 aa26.16■■□□□ 1.78
R3HCC1-206ENST00000520480 DNAJC5Q9H3Z4 198 aa26.03■■□□□ 1.76
R3HCC1-206ENST00000520480 URB2Q14146 1524 aaKnown RBP25.98■■□□□ 1.75
R3HCC1-206ENST00000520480 SUPT5HO00267 1087 aaKnown RBP25.9■■□□□ 1.74
R3HCC1-206ENST00000520480 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
R3HCC1-206ENST00000520480 TOPBP1Q92547 1522 aa25.79■■□□□ 1.72
R3HCC1-206ENST00000520480 DNMBPQ6XZF7 1577 aa25.76■■□□□ 1.71
R3HCC1-206ENST00000520480 IFT140Q96RY7 1462 aa25.71■■□□□ 1.71
R3HCC1-206ENST00000520480 ZNF608Q9ULD9 1512 aaPredicted RBP25.58■■□□□ 1.69
R3HCC1-206ENST00000520480 POLA1P09884 1462 aaPredicted RBP25.56■■□□□ 1.68
R3HCC1-206ENST00000520480 TARBP1Q13395 1621 aaKnown RBP25.54■■□□□ 1.68
R3HCC1-206ENST00000520480 EIF4G3O43432 1585 aaKnown RBP25.5■■□□□ 1.67
R3HCC1-206ENST00000520480 CUX1P39880 1505 aa25.5■■□□□ 1.67
R3HCC1-206ENST00000520480 FGD5Q6ZNL6 1462 aa25.47■■□□□ 1.67
R3HCC1-206ENST00000520480 SOGA1O94964 1423 aa25.46■■□□□ 1.67
R3HCC1-206ENST00000520480 RAD54L2Q9Y4B4 1467 aa25.43■■□□□ 1.66
R3HCC1-206ENST00000520480 OSCARQ8IYS5 282 aa25.43■■□□□ 1.66
R3HCC1-206ENST00000520480 AQRO60306 1485 aaKnown RBP eCLIP25.41■■□□□ 1.666e-7■■■□□ 17.9
R3HCC1-206ENST00000520480 WDR97A6NE52 1622 aa25.37■■□□□ 1.65
R3HCC1-206ENST00000520480 TDRD9Q8NDG6 1382 aaKnown RBP25.33■■□□□ 1.65
R3HCC1-206ENST00000520480 WRNQ14191 1432 aaPredicted RBP eCLIP25.27■■□□□ 1.64
R3HCC1-206ENST00000520480 TOP2BQ02880 1626 aa25.24■■□□□ 1.63
R3HCC1-206ENST00000520480 BIVM-ERCC5R4GMW8 1640 aa25.24■■□□□ 1.63
R3HCC1-206ENST00000520480 CHD1O14646 1710 aa25.23■■□□□ 1.63
R3HCC1-206ENST00000520480 ABCA10Q8WWZ4 1543 aa25.22■■□□□ 1.63
R3HCC1-206ENST00000520480 SYNJ1O43426 1573 aa25.21■■□□□ 1.63
R3HCC1-206ENST00000520480 GRIN2BQ13224 1484 aa25.2■■□□□ 1.62
R3HCC1-206ENST00000520480 SNAPC4Q5SXM2 1469 aa25.18■■□□□ 1.62
R3HCC1-206ENST00000520480 FBLN2P98095 1184 aa25.17■■□□□ 1.62
R3HCC1-206ENST00000520480 GAPVD1Q14C86 1478 aa25.16■■□□□ 1.62
R3HCC1-206ENST00000520480 MAGI1Q96QZ7 1491 aaPredicted RBP25.16■■□□□ 1.62
R3HCC1-206ENST00000520480 ABCA5Q8WWZ7 1642 aa25.14■■□□□ 1.61
R3HCC1-206ENST00000520480 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
R3HCC1-206ENST00000520480 CHMP7Q8WUX9 453 aaPredicted RBP25.08■■□□□ 1.61
R3HCC1-206ENST00000520480 SYNJ2O15056 1496 aa25.07■■□□□ 1.6
R3HCC1-206ENST00000520480 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
R3HCC1-206ENST00000520480 RIMBP3CA6NJZ7 1639 aa25.04■■□□□ 1.6
R3HCC1-206ENST00000520480 RIMBP3BA6NNM3 1639 aa25.04■■□□□ 1.6
R3HCC1-206ENST00000520480 RIMBP3Q9UFD9 1639 aa25.04■■□□□ 1.6
R3HCC1-206ENST00000520480 ARHGEF11O15085 1522 aa25.01■■□□□ 1.59
R3HCC1-206ENST00000520480 CLASP1Q7Z460 1538 aa24.94■■□□□ 1.58
R3HCC1-206ENST00000520480 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
R3HCC1-206ENST00000520480 ERICH3Q5RHP9 1530 aa24.91■■□□□ 1.58
R3HCC1-206ENST00000520480 GRIN2AQ12879 1464 aa24.87■■□□□ 1.57
R3HCC1-206ENST00000520480 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
R3HCC1-206ENST00000520480 CYB5RLQ6IPT4 315 aa24.79■■□□□ 1.56
R3HCC1-206ENST00000520480 ARAP1Q96P48 1450 aa24.78■■□□□ 1.56
R3HCC1-206ENST00000520480 KIF27Q86VH2 1401 aa24.78■■□□□ 1.56
R3HCC1-206ENST00000520480 NUP160Q12769 1436 aa24.76■■□□□ 1.55
R3HCC1-206ENST00000520480 CEP170Q5SW79 1584 aa24.74■■□□□ 1.55
R3HCC1-206ENST00000520480 IGF1RP08069 1367 aa24.67■■□□□ 1.54
R3HCC1-206ENST00000520480 CUL7Q14999 1698 aa24.66■■□□□ 1.54
R3HCC1-206ENST00000520480 SHROOM2Q13796 1616 aa24.61■■□□□ 1.53
R3HCC1-206ENST00000520480 RUSC2Q8N2Y8 1516 aa24.56■■□□□ 1.52
R3HCC1-206ENST00000520480 ERCC6L2Q5T890 1561 aa24.55■■□□□ 1.52
R3HCC1-206ENST00000520480 CARMIL1Q5VZK9 1371 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms