RNA–Protein interactions for RNA: ENST00000520472.5

CNOT8-213, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 5

Gene CNOT8, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-213ENST00000520472 NISCHQ9Y2I1 1504 aa41.76■■■■■ 4.28
CNOT8-213ENST00000520472 CCDC180Q9P1Z9 1646 aa37.02■■■■□ 3.52
CNOT8-213ENST00000520472 ABCC9O60706 1549 aa37.01■■■■□ 3.52
CNOT8-213ENST00000520472 RB1CC1Q8TDY2 1594 aa35.08■■■■□ 3.21
CNOT8-213ENST00000520472 DCAF8L2P0C7V8 631 aa34.95■■■■□ 3.19
CNOT8-213ENST00000520472 DNAJC5BQ9UF47 199 aa34.95■■■■□ 3.19
CNOT8-213ENST00000520472 ZCCHC6Q5VYS8 1495 aaKnown RBP34.81■■■■□ 3.16
CNOT8-213ENST00000520472 NACADO15069 1562 aa34.81■■■■□ 3.16
CNOT8-213ENST00000520472 MYO15BQ96JP2 1530 aa34.71■■■■□ 3.15
CNOT8-213ENST00000520472 DCAF1Q9Y4B6 1507 aa34.61■■■■□ 3.13
CNOT8-213ENST00000520472 PABPN1Q86U42 306 aaKnown RBP eCLIP34.4■■■■□ 3.1
CNOT8-213ENST00000520472 UNC13AQ9UPW8 1703 aa34.27■■■■□ 3.08
CNOT8-213ENST00000520472 BICRAQ9NZM4 1560 aa34.06■■■■□ 3.04
CNOT8-213ENST00000520472 SCRIBQ14160 1630 aa33.73■■■□□ 2.99
CNOT8-213ENST00000520472 SHROOM4Q9ULL8 1493 aa33.59■■■□□ 2.97
CNOT8-213ENST00000520472 CC2D2AQ9P2K1 1620 aa33.41■■■□□ 2.94
CNOT8-213ENST00000520472 CECR2Q9BXF3 1484 aa33.37■■■□□ 2.93
CNOT8-213ENST00000520472 EIF4G1Q04637 1599 aaKnown RBP33.27■■■□□ 2.92
CNOT8-213ENST00000520472 BAZ1AQ9NRL2 1556 aaPredicted RBP32.37■■■□□ 2.77
CNOT8-213ENST00000520472 DNAJC5Q9H3Z4 198 aa32.34■■■□□ 2.77
CNOT8-213ENST00000520472 SMARCA4P51532 1647 aa32.32■■■□□ 2.76
CNOT8-213ENST00000520472 NCAPD3P42695 1498 aa32.16■■■□□ 2.74
CNOT8-213ENST00000520472 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
CNOT8-213ENST00000520472 SMARCA2P51531 1590 aa32.13■■■□□ 2.73
CNOT8-213ENST00000520472 ATAD2BQ9ULI0 1458 aa32.13■■■□□ 2.73
CNOT8-213ENST00000520472 PEG3Q9GZU2 1588 aa32.05■■■□□ 2.72
CNOT8-213ENST00000520472 CUX2O14529 1486 aa32.03■■■□□ 2.72
CNOT8-213ENST00000520472 ERCC6Q03468 1493 aa32.01■■■□□ 2.71
CNOT8-213ENST00000520472 HMGXB3Q12766 1538 aa31.95■■■□□ 2.7
CNOT8-213ENST00000520472 RSF1Q96T23 1441 aaPredicted RBP31.9■■■□□ 2.7
CNOT8-213ENST00000520472 BAZ1BQ9UIG0 1483 aaKnown RBP31.89■■■□□ 2.7
CNOT8-213ENST00000520472 WIZO95785 1651 aa31.78■■■□□ 2.68
CNOT8-213ENST00000520472 NESP48681 1621 aa31.7■■■□□ 2.66
CNOT8-213ENST00000520472 TOP2AP11388 1531 aaKnown RBP31.51■■■□□ 2.63
CNOT8-213ENST00000520472 THOC2Q8NI27 1593 aaKnown RBP31.45■■■□□ 2.63
CNOT8-213ENST00000520472 LAMC3Q9Y6N6 1575 aa31.43■■■□□ 2.62
CNOT8-213ENST00000520472 KIF21AQ7Z4S6 1674 aa31.29■■■□□ 2.6
CNOT8-213ENST00000520472 PDS5BQ9NTI5 1447 aa31.26■■■□□ 2.6
CNOT8-213ENST00000520472 CADPSQ9ULU8 1353 aa31.26■■■□□ 2.59
CNOT8-213ENST00000520472 SUPT5HO00267 1087 aaKnown RBP31.25■■■□□ 2.59
CNOT8-213ENST00000520472 CCDC88BA6NC98 1476 aa31.14■■■□□ 2.58
CNOT8-213ENST00000520472 CFTRP13569 1480 aa31.04■■■□□ 2.56
CNOT8-213ENST00000520472 MRC2Q9UBG0 1479 aa31.02■■■□□ 2.56
CNOT8-213ENST00000520472 WDR62O43379 1518 aa30.94■■■□□ 2.54
CNOT8-213ENST00000520472 FANCD2Q9BXW9 1451 aa30.84■■■□□ 2.53
CNOT8-213ENST00000520472 CEP164Q9UPV0 1460 aa30.84■■■□□ 2.53
CNOT8-213ENST00000520472 TRIM41Q8WV44 630 aa30.84■■■□□ 2.53
CNOT8-213ENST00000520472 PRDM2Q13029 1718 aa30.73■■■□□ 2.51
CNOT8-213ENST00000520472 URB2Q14146 1524 aaKnown RBP30.52■■■□□ 2.48
CNOT8-213ENST00000520472 OSCARQ8IYS5 282 aa30.48■■■□□ 2.47
CNOT8-213ENST00000520472 ABCC8Q09428 1581 aa30.44■■■□□ 2.46
CNOT8-213ENST00000520472 TOPBP1Q92547 1522 aa30.32■■■□□ 2.44
CNOT8-213ENST00000520472 DNMBPQ6XZF7 1577 aa30.31■■■□□ 2.44
CNOT8-213ENST00000520472 IFT140Q96RY7 1462 aa30.22■■■□□ 2.43
CNOT8-213ENST00000520472 ZNF608Q9ULD9 1512 aaPredicted RBP30.2■■■□□ 2.42
CNOT8-213ENST00000520472 RIMBP3CA6NJZ7 1639 aa30.16■■■□□ 2.42
CNOT8-213ENST00000520472 RIMBP3BA6NNM3 1639 aa30.16■■■□□ 2.42
CNOT8-213ENST00000520472 RIMBP3Q9UFD9 1639 aa30.16■■■□□ 2.42
CNOT8-213ENST00000520472 CUX1P39880 1505 aa30.14■■■□□ 2.42
CNOT8-213ENST00000520472 WRNQ14191 1432 aaPredicted RBP eCLIP30.09■■■□□ 2.41
CNOT8-213ENST00000520472 POLA1P09884 1462 aaPredicted RBP30.08■■■□□ 2.41
CNOT8-213ENST00000520472 EIF4G3O43432 1585 aaKnown RBP30.04■■■□□ 2.4
CNOT8-213ENST00000520472 ARHGEF11O15085 1522 aa30.03■■■□□ 2.4
CNOT8-213ENST00000520472 FGD5Q6ZNL6 1462 aa30.03■■■□□ 2.4
CNOT8-213ENST00000520472 SOGA1O94964 1423 aa30.01■■■□□ 2.39
CNOT8-213ENST00000520472 TOP2BQ02880 1626 aa29.97■■■□□ 2.39
CNOT8-213ENST00000520472 TARBP1Q13395 1621 aaKnown RBP29.95■■■□□ 2.38
CNOT8-213ENST00000520472 BIVM-ERCC5R4GMW8 1640 aa29.94■■■□□ 2.38
CNOT8-213ENST00000520472 RAD54L2Q9Y4B4 1467 aa29.92■■■□□ 2.38
CNOT8-213ENST00000520472 SYNJ1O43426 1573 aa29.91■■■□□ 2.38
CNOT8-213ENST00000520472 AQRO60306 1485 aaKnown RBP eCLIP29.88■■■□□ 2.377e-8■□□□□ 10.3
CNOT8-213ENST00000520472 CHD1O14646 1710 aa29.87■■■□□ 2.37
CNOT8-213ENST00000520472 TDRD9Q8NDG6 1382 aaKnown RBP29.84■■■□□ 2.37
CNOT8-213ENST00000520472 CYB5RLQ6IPT4 315 aa29.81■■■□□ 2.36
CNOT8-213ENST00000520472 WDR97A6NE52 1622 aa29.81■■■□□ 2.36
CNOT8-213ENST00000520472 ABCA10Q8WWZ4 1543 aa29.78■■■□□ 2.36
CNOT8-213ENST00000520472 FBLN2P98095 1184 aa29.77■■■□□ 2.36
CNOT8-213ENST00000520472 ARAP1Q96P48 1450 aa29.73■■■□□ 2.35
CNOT8-213ENST00000520472 GAPVD1Q14C86 1478 aa29.65■■■□□ 2.34
CNOT8-213ENST00000520472 GRIN2BQ13224 1484 aa29.63■■■□□ 2.33
CNOT8-213ENST00000520472 TRHP20396 242 aaPredicted RBP29.61■■■□□ 2.33
CNOT8-213ENST00000520472 SNAPC4Q5SXM2 1469 aa29.6■■■□□ 2.33
CNOT8-213ENST00000520472 CHMP7Q8WUX9 453 aaPredicted RBP29.59■■■□□ 2.33
CNOT8-213ENST00000520472 ABCA5Q8WWZ7 1642 aa29.59■■■□□ 2.33
CNOT8-213ENST00000520472 MAGI1Q96QZ7 1491 aaPredicted RBP29.55■■■□□ 2.32
CNOT8-213ENST00000520472 CLASP1Q7Z460 1538 aa29.51■■■□□ 2.32
CNOT8-213ENST00000520472 PBRM1Q86U86 1689 aa29.47■■■□□ 2.31
CNOT8-213ENST00000520472 KIF27Q86VH2 1401 aa29.47■■■□□ 2.31
CNOT8-213ENST00000520472 ERICH3Q5RHP9 1530 aa29.45■■■□□ 2.3
CNOT8-213ENST00000520472 SYNJ2O15056 1496 aa29.44■■■□□ 2.3
CNOT8-213ENST00000520472 FHAD1B1AJZ9 1412 aa29.33■■■□□ 2.29
CNOT8-213ENST00000520472 IGF1RP08069 1367 aa29.32■■■□□ 2.28
CNOT8-213ENST00000520472 CHIC1Q5VXU3 224 aa29.3■■■□□ 2.28
CNOT8-213ENST00000520472 ADAMTS12P58397 1594 aa29.29■■■□□ 2.28
CNOT8-213ENST00000520472 GRIN2AQ12879 1464 aa29.22■■■□□ 2.27
CNOT8-213ENST00000520472 CUL7Q14999 1698 aa29.19■■■□□ 2.26
CNOT8-213ENST00000520472 RUSC2Q8N2Y8 1516 aa29.16■■■□□ 2.26
CNOT8-213ENST00000520472 CARMIL1Q5VZK9 1371 aa29.14■■■□□ 2.26
CNOT8-213ENST00000520472 NUP160Q12769 1436 aa29.09■■■□□ 2.25
CNOT8-213ENST00000520472 EEA1Q15075 1411 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms