RNA–Protein interactions for RNA: ENST00000520428.5

RUNX1T1-224, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-224ENST00000520428 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
RUNX1T1-224ENST00000520428 ABCC9O60706 1549 aa20.27■□□□□ 0.84
RUNX1T1-224ENST00000520428 DNAJC5BQ9UF47 199 aa19.82■□□□□ 0.76
RUNX1T1-224ENST00000520428 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
RUNX1T1-224ENST00000520428 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.61
RUNX1T1-224ENST00000520428 DNAJC5Q9H3Z4 198 aa18.85■□□□□ 0.61
RUNX1T1-224ENST00000520428 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
RUNX1T1-224ENST00000520428 NACADO15069 1562 aa18.56■□□□□ 0.56
RUNX1T1-224ENST00000520428 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
RUNX1T1-224ENST00000520428 CECR2Q9BXF3 1484 aa18.38■□□□□ 0.53
RUNX1T1-224ENST00000520428 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
RUNX1T1-224ENST00000520428 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
RUNX1T1-224ENST00000520428 CC2D2AQ9P2K1 1620 aa18.2■□□□□ 0.5
RUNX1T1-224ENST00000520428 SHROOM4Q9ULL8 1493 aa18.09■□□□□ 0.49
RUNX1T1-224ENST00000520428 MYO15BQ96JP2 1530 aa18.07■□□□□ 0.48
RUNX1T1-224ENST00000520428 EIF4G1Q04637 1599 aaKnown RBP17.99■□□□□ 0.47
RUNX1T1-224ENST00000520428 CUX2O14529 1486 aa17.84■□□□□ 0.45
RUNX1T1-224ENST00000520428 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
RUNX1T1-224ENST00000520428 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
RUNX1T1-224ENST00000520428 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
RUNX1T1-224ENST00000520428 DCAF1Q9Y4B6 1507 aa17.51■□□□□ 0.39
RUNX1T1-224ENST00000520428 ZCCHC6Q5VYS8 1495 aaKnown RBP17.43■□□□□ 0.38
RUNX1T1-224ENST00000520428 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
RUNX1T1-224ENST00000520428 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
RUNX1T1-224ENST00000520428 NESP48681 1621 aa17.15■□□□□ 0.34
RUNX1T1-224ENST00000520428 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
RUNX1T1-224ENST00000520428 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.32
RUNX1T1-224ENST00000520428 SMARCA2P51531 1590 aa16.96■□□□□ 0.31
RUNX1T1-224ENST00000520428 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
RUNX1T1-224ENST00000520428 HMGXB3Q12766 1538 aa16.94■□□□□ 0.3
RUNX1T1-224ENST00000520428 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
RUNX1T1-224ENST00000520428 LAMC3Q9Y6N6 1575 aa16.87■□□□□ 0.29
RUNX1T1-224ENST00000520428 BAZ1AQ9NRL2 1556 aaPredicted RBP16.82■□□□□ 0.28
RUNX1T1-224ENST00000520428 BAZ1BQ9UIG0 1483 aaKnown RBP16.8■□□□□ 0.28
RUNX1T1-224ENST00000520428 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
RUNX1T1-224ENST00000520428 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
RUNX1T1-224ENST00000520428 WDR62O43379 1518 aa16.73■□□□□ 0.27
RUNX1T1-224ENST00000520428 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
RUNX1T1-224ENST00000520428 TRHP20396 242 aaPredicted RBP16.68■□□□□ 0.26
RUNX1T1-224ENST00000520428 RIMBP3CA6NJZ7 1639 aa16.67■□□□□ 0.26
RUNX1T1-224ENST00000520428 RIMBP3BA6NNM3 1639 aa16.67■□□□□ 0.26
RUNX1T1-224ENST00000520428 RIMBP3Q9UFD9 1639 aa16.67■□□□□ 0.26
RUNX1T1-224ENST00000520428 CADPSQ9ULU8 1353 aa16.66■□□□□ 0.26
RUNX1T1-224ENST00000520428 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
RUNX1T1-224ENST00000520428 CYB5RLQ6IPT4 315 aa16.59■□□□□ 0.25
RUNX1T1-224ENST00000520428 CHIC1Q5VXU3 224 aa16.58■□□□□ 0.24
RUNX1T1-224ENST00000520428 PEG3Q9GZU2 1588 aa16.57■□□□□ 0.24
RUNX1T1-224ENST00000520428 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.23
RUNX1T1-224ENST00000520428 FANCD2Q9BXW9 1451 aa16.44■□□□□ 0.22
RUNX1T1-224ENST00000520428 ARAP1Q96P48 1450 aa16.38■□□□□ 0.21
RUNX1T1-224ENST00000520428 MROH2BQ7Z745 1585 aa16.35■□□□□ 0.21
RUNX1T1-224ENST00000520428 URB2Q14146 1524 aaKnown RBP16.34■□□□□ 0.21
RUNX1T1-224ENST00000520428 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
RUNX1T1-224ENST00000520428 CFTRP13569 1480 aa16.27■□□□□ 0.19
RUNX1T1-224ENST00000520428 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
RUNX1T1-224ENST00000520428 IFT140Q96RY7 1462 aa16.25■□□□□ 0.19
RUNX1T1-224ENST00000520428 ILDR1Q86SU0 546 aaPredicted RBP16.24■□□□□ 0.19
RUNX1T1-224ENST00000520428 FBLN2P98095 1184 aa16.15■□□□□ 0.18
RUNX1T1-224ENST00000520428 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.16
RUNX1T1-224ENST00000520428 AQRO60306 1485 aaKnown RBP eCLIP16.04■□□□□ 0.16
RUNX1T1-224ENST00000520428 WIZO95785 1651 aa16.03■□□□□ 0.16
RUNX1T1-224ENST00000520428 CHD1O14646 1710 aa16.02■□□□□ 0.15
RUNX1T1-224ENST00000520428 TOPBP1Q92547 1522 aa16.01■□□□□ 0.15
RUNX1T1-224ENST00000520428 CLASP1Q7Z460 1538 aa15.95■□□□□ 0.14
RUNX1T1-224ENST00000520428 ABCC8Q09428 1581 aa15.94■□□□□ 0.14
RUNX1T1-224ENST00000520428 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
RUNX1T1-224ENST00000520428 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
RUNX1T1-224ENST00000520428 TARBP1Q13395 1621 aaKnown RBP15.88■□□□□ 0.13
RUNX1T1-224ENST00000520428 SYNJ1O43426 1573 aa15.86■□□□□ 0.13
RUNX1T1-224ENST00000520428 KDM4FA0A1W2PPD8 638 aa15.85■□□□□ 0.13
RUNX1T1-224ENST00000520428 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
RUNX1T1-224ENST00000520428 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
RUNX1T1-224ENST00000520428 DNMBPQ6XZF7 1577 aa15.84■□□□□ 0.13
RUNX1T1-224ENST00000520428 TDRD9Q8NDG6 1382 aaKnown RBP15.84■□□□□ 0.13
RUNX1T1-224ENST00000520428 POLA1P09884 1462 aaPredicted RBP15.8■□□□□ 0.12
RUNX1T1-224ENST00000520428 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
RUNX1T1-224ENST00000520428 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
RUNX1T1-224ENST00000520428 PRDM2Q13029 1718 aa15.75■□□□□ 0.11
RUNX1T1-224ENST00000520428 SOGA1O94964 1423 aa15.75■□□□□ 0.11
RUNX1T1-224ENST00000520428 SYNJ2O15056 1496 aa15.74■□□□□ 0.11
RUNX1T1-224ENST00000520428 CCDC88BA6NC98 1476 aa15.71■□□□□ 0.1
RUNX1T1-224ENST00000520428 GRIN2BQ13224 1484 aa15.7■□□□□ 0.1
RUNX1T1-224ENST00000520428 WDR97A6NE52 1622 aa15.67■□□□□ 0.1
RUNX1T1-224ENST00000520428 FAM69CQ0P6D2 419 aa15.65■□□□□ 0.1
RUNX1T1-224ENST00000520428 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
RUNX1T1-224ENST00000520428 ABCC10Q5T3U5 1492 aa15.59■□□□□ 0.09
RUNX1T1-224ENST00000520428 FBXO41Q8TF61 875 aa15.58■□□□□ 0.08
RUNX1T1-224ENST00000520428 FGD5Q6ZNL6 1462 aa15.57■□□□□ 0.08
RUNX1T1-224ENST00000520428 KIF13AQ9H1H9 1805 aa15.57■□□□□ 0.08
RUNX1T1-224ENST00000520428 KDM6BO15054 1643 aa15.53■□□□□ 0.08
RUNX1T1-224ENST00000520428 CEP170Q5SW79 1584 aa15.53■□□□□ 0.08
RUNX1T1-224ENST00000520428 HECW2Q9P2P5 1572 aa15.51■□□□□ 0.07
RUNX1T1-224ENST00000520428 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.07
RUNX1T1-224ENST00000520428 ADGRL1O94910 1474 aa15.48■□□□□ 0.07
RUNX1T1-224ENST00000520428 GRIN2AQ12879 1464 aa15.48■□□□□ 0.07
RUNX1T1-224ENST00000520428 NUP160Q12769 1436 aa15.48■□□□□ 0.07
RUNX1T1-224ENST00000520428 MAPKBP1O60336 1514 aa15.45■□□□□ 0.06
RUNX1T1-224ENST00000520428 DIP2BQ9P265 1576 aa15.44■□□□□ 0.06
RUNX1T1-224ENST00000520428 SHROOM2Q13796 1616 aa15.41■□□□□ 0.06
RUNX1T1-224ENST00000520428 CUX1P39880 1505 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms