RNA–Protein interactions for RNA: ENST00000520427.1

SRA1-202, Transcript of steroid receptor RNA activator 1, humanhuman

TSL 1 (best)

Gene SRA1, Length 978 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRA1-202ENST00000520427 NISCHQ9Y2I1 1504 aa37.26■■■■□ 3.56
SRA1-202ENST00000520427 CCDC180Q9P1Z9 1646 aa33.04■■■□□ 2.88
SRA1-202ENST00000520427 ABCC9O60706 1549 aa31.93■■■□□ 2.7
SRA1-202ENST00000520427 ZCCHC6Q5VYS8 1495 aaKnown RBP31.15■■■□□ 2.58
SRA1-202ENST00000520427 NACADO15069 1562 aa30.86■■■□□ 2.53
SRA1-202ENST00000520427 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
SRA1-202ENST00000520427 DCAF1Q9Y4B6 1507 aa30.81■■■□□ 2.52
SRA1-202ENST00000520427 DCAF8L2P0C7V8 631 aa30.77■■■□□ 2.52
SRA1-202ENST00000520427 MYO15BQ96JP2 1530 aa30.77■■■□□ 2.52
SRA1-202ENST00000520427 UNC13AQ9UPW8 1703 aa30.43■■■□□ 2.46
SRA1-202ENST00000520427 SCRIBQ14160 1630 aa30.21■■■□□ 2.43
SRA1-202ENST00000520427 BICRAQ9NZM4 1560 aa30.06■■■□□ 2.4
SRA1-202ENST00000520427 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.36
SRA1-202ENST00000520427 SHROOM4Q9ULL8 1493 aa29.64■■■□□ 2.34
SRA1-202ENST00000520427 EIF4G1Q04637 1599 aaKnown RBP29.13■■■□□ 2.25
SRA1-202ENST00000520427 CECR2Q9BXF3 1484 aa29.04■■■□□ 2.24
SRA1-202ENST00000520427 DNAJC5BQ9UF47 199 aa29■■■□□ 2.23
SRA1-202ENST00000520427 CC2D2AQ9P2K1 1620 aa28.95■■■□□ 2.23
SRA1-202ENST00000520427 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
SRA1-202ENST00000520427 BAZ1AQ9NRL2 1556 aaPredicted RBP28.82■■■□□ 2.2
SRA1-202ENST00000520427 MROH2BQ7Z745 1585 aa28.79■■■□□ 2.2
SRA1-202ENST00000520427 PEG3Q9GZU2 1588 aa28.58■■■□□ 2.17
SRA1-202ENST00000520427 ATAD2BQ9ULI0 1458 aa28.57■■■□□ 2.16
SRA1-202ENST00000520427 WIZO95785 1651 aa28.55■■■□□ 2.16
SRA1-202ENST00000520427 SMARCA2P51531 1590 aa28.52■■■□□ 2.16
SRA1-202ENST00000520427 RSF1Q96T23 1441 aaPredicted RBP28.51■■■□□ 2.15
SRA1-202ENST00000520427 NCAPD3P42695 1498 aa28.45■■■□□ 2.14
SRA1-202ENST00000520427 HMGXB3Q12766 1538 aa28.42■■■□□ 2.14
SRA1-202ENST00000520427 BAZ1BQ9UIG0 1483 aaKnown RBP28.33■■■□□ 2.13
SRA1-202ENST00000520427 TOP2AP11388 1531 aaKnown RBP28.18■■■□□ 2.1
SRA1-202ENST00000520427 SUPT5HO00267 1087 aaKnown RBP27.94■■■□□ 2.06
SRA1-202ENST00000520427 CCDC88BA6NC98 1476 aa27.82■■■□□ 2.04
SRA1-202ENST00000520427 NESP48681 1621 aa27.81■■■□□ 2.04
SRA1-202ENST00000520427 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
SRA1-202ENST00000520427 PRDM2Q13029 1718 aa27.61■■■□□ 2.01
SRA1-202ENST00000520427 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
SRA1-202ENST00000520427 KIF21AQ7Z4S6 1674 aa27.58■■■□□ 2.01
SRA1-202ENST00000520427 CFTRP13569 1480 aa27.57■■■□□ 2
SRA1-202ENST00000520427 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
SRA1-202ENST00000520427 THOC2Q8NI27 1593 aaKnown RBP27.36■■□□□ 1.97
SRA1-202ENST00000520427 PDS5BQ9NTI5 1447 aa27.36■■□□□ 1.97
SRA1-202ENST00000520427 FANCD2Q9BXW9 1451 aa27.35■■□□□ 1.97
SRA1-202ENST00000520427 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
SRA1-202ENST00000520427 MRC2Q9UBG0 1479 aa27.18■■□□□ 1.94
SRA1-202ENST00000520427 URB2Q14146 1524 aaKnown RBP27.15■■□□□ 1.94
SRA1-202ENST00000520427 WDR62O43379 1518 aa27.14■■□□□ 1.94
SRA1-202ENST00000520427 ABCC8Q09428 1581 aa27.01■■□□□ 1.92
SRA1-202ENST00000520427 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.92
SRA1-202ENST00000520427 TOPBP1Q92547 1522 aa27■■□□□ 1.91
SRA1-202ENST00000520427 CUX1P39880 1505 aa26.99■■□□□ 1.91
SRA1-202ENST00000520427 CUX2O14529 1486 aa26.99■■□□□ 1.91
SRA1-202ENST00000520427 SYNJ1O43426 1573 aa26.91■■□□□ 1.9
SRA1-202ENST00000520427 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
SRA1-202ENST00000520427 TOP2BQ02880 1626 aa26.83■■□□□ 1.88
SRA1-202ENST00000520427 WRNQ14191 1432 aaPredicted RBP eCLIP26.82■■□□□ 1.88
SRA1-202ENST00000520427 POLA1P09884 1462 aaPredicted RBP26.8■■□□□ 1.88
SRA1-202ENST00000520427 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
SRA1-202ENST00000520427 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
SRA1-202ENST00000520427 WDR97A6NE52 1622 aa26.72■■□□□ 1.87
SRA1-202ENST00000520427 RAD54L2Q9Y4B4 1467 aa26.69■■□□□ 1.86
SRA1-202ENST00000520427 IFT140Q96RY7 1462 aa26.66■■□□□ 1.86
SRA1-202ENST00000520427 ZNF608Q9ULD9 1512 aaPredicted RBP26.64■■□□□ 1.85
SRA1-202ENST00000520427 EIF4G3O43432 1585 aaKnown RBP26.59■■□□□ 1.85
SRA1-202ENST00000520427 SOGA1O94964 1423 aa26.58■■□□□ 1.85
SRA1-202ENST00000520427 ABCA10Q8WWZ4 1543 aa26.51■■□□□ 1.83
SRA1-202ENST00000520427 ABCA5Q8WWZ7 1642 aa26.49■■□□□ 1.83
SRA1-202ENST00000520427 AQRO60306 1485 aaKnown RBP eCLIP26.46■■□□□ 1.832e-6■■■□□ 16.6
SRA1-202ENST00000520427 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
SRA1-202ENST00000520427 TDRD9Q8NDG6 1382 aaKnown RBP26.43■■□□□ 1.82
SRA1-202ENST00000520427 GAPVD1Q14C86 1478 aa26.33■■□□□ 1.81
SRA1-202ENST00000520427 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
SRA1-202ENST00000520427 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
SRA1-202ENST00000520427 GRIN2BQ13224 1484 aa26.26■■□□□ 1.79
SRA1-202ENST00000520427 CHD1O14646 1710 aa26.25■■□□□ 1.79
SRA1-202ENST00000520427 SNAPC4Q5SXM2 1469 aa26.25■■□□□ 1.79
SRA1-202ENST00000520427 RUSC2Q8N2Y8 1516 aa26.24■■□□□ 1.79
SRA1-202ENST00000520427 ADAMTS12P58397 1594 aa26.2■■□□□ 1.78
SRA1-202ENST00000520427 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
SRA1-202ENST00000520427 KIF27Q86VH2 1401 aa26.17■■□□□ 1.78
SRA1-202ENST00000520427 MAGI1Q96QZ7 1491 aaPredicted RBP26.16■■□□□ 1.78
SRA1-202ENST00000520427 CUL7Q14999 1698 aa26.07■■□□□ 1.76
SRA1-202ENST00000520427 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
SRA1-202ENST00000520427 IGF1RP08069 1367 aa26.06■■□□□ 1.76
SRA1-202ENST00000520427 FHAD1B1AJZ9 1412 aa26■■□□□ 1.75
SRA1-202ENST00000520427 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
SRA1-202ENST00000520427 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
SRA1-202ENST00000520427 FBLN2P98095 1184 aa25.92■■□□□ 1.74
SRA1-202ENST00000520427 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
SRA1-202ENST00000520427 CARMIL1Q5VZK9 1371 aa25.88■■□□□ 1.73
SRA1-202ENST00000520427 CHMP7Q8WUX9 453 aaPredicted RBP25.88■■□□□ 1.73
SRA1-202ENST00000520427 EEA1Q15075 1411 aa25.88■■□□□ 1.73
SRA1-202ENST00000520427 PRXQ9BXM0 1461 aa25.85■■□□□ 1.73
SRA1-202ENST00000520427 NUP160Q12769 1436 aa25.84■■□□□ 1.73
SRA1-202ENST00000520427 FAM9AQ8IZU1 332 aaPredicted RBP25.84■■□□□ 1.73
SRA1-202ENST00000520427 RAPGEF2Q9Y4G8 1499 aa25.8■■□□□ 1.72
SRA1-202ENST00000520427 OSCARQ8IYS5 282 aa25.8■■□□□ 1.72
SRA1-202ENST00000520427 CSRNP3Q8WYN3 585 aa25.77■■□□□ 1.72
SRA1-202ENST00000520427 KIF21BO75037 1637 aa25.76■■□□□ 1.71
SRA1-202ENST00000520427 CTTNBP2Q8WZ74 1663 aa25.74■■□□□ 1.71
SRA1-202ENST00000520427 SHROOM2Q13796 1616 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms