RNA–Protein interactions for RNA: ENST00000520353.5

GRIA1-211, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 5

Gene GRIA1, Length 362 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-211ENST00000520353 NISCHQ9Y2I1 1504 aa29.74■■■□□ 2.35
GRIA1-211ENST00000520353 CCDC180Q9P1Z9 1646 aa25.99■■□□□ 1.75
GRIA1-211ENST00000520353 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
GRIA1-211ENST00000520353 DCAF1Q9Y4B6 1507 aa24.63■■□□□ 1.53
GRIA1-211ENST00000520353 DCAF8L2P0C7V8 631 aa24.59■■□□□ 1.53
GRIA1-211ENST00000520353 ABCC9O60706 1549 aa24.38■■□□□ 1.49
GRIA1-211ENST00000520353 SHROOM4Q9ULL8 1493 aa24.31■■□□□ 1.48
GRIA1-211ENST00000520353 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
GRIA1-211ENST00000520353 NACADO15069 1562 aa24.16■■□□□ 1.46
GRIA1-211ENST00000520353 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
GRIA1-211ENST00000520353 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
GRIA1-211ENST00000520353 SUPT5HO00267 1087 aaKnown RBP23.48■■□□□ 1.35
GRIA1-211ENST00000520353 UNC13AQ9UPW8 1703 aa23.37■■□□□ 1.33
GRIA1-211ENST00000520353 RSF1Q96T23 1441 aaPredicted RBP23.07■■□□□ 1.28
GRIA1-211ENST00000520353 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
GRIA1-211ENST00000520353 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
GRIA1-211ENST00000520353 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
GRIA1-211ENST00000520353 PABPN1Q86U42 306 aaKnown RBP eCLIP22.97■■□□□ 1.27
GRIA1-211ENST00000520353 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
GRIA1-211ENST00000520353 SMARCA4P51532 1647 aa22.87■■□□□ 1.25
GRIA1-211ENST00000520353 WIZO95785 1651 aa22.79■■□□□ 1.24
GRIA1-211ENST00000520353 TOP2AP11388 1531 aaKnown RBP22.62■■□□□ 1.21
GRIA1-211ENST00000520353 PEG3Q9GZU2 1588 aa22.55■■□□□ 1.2
GRIA1-211ENST00000520353 SMARCA2P51531 1590 aa22.52■■□□□ 1.2
GRIA1-211ENST00000520353 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
GRIA1-211ENST00000520353 EIF4G1Q04637 1599 aaKnown RBP22.44■■□□□ 1.18
GRIA1-211ENST00000520353 ATAD2BQ9ULI0 1458 aa22.42■■□□□ 1.18
GRIA1-211ENST00000520353 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.17
GRIA1-211ENST00000520353 CCDC88BA6NC98 1476 aa22.32■■□□□ 1.16
GRIA1-211ENST00000520353 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
GRIA1-211ENST00000520353 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
GRIA1-211ENST00000520353 TRIM41Q8WV44 630 aa22.14■■□□□ 1.13
GRIA1-211ENST00000520353 CC2D2AQ9P2K1 1620 aa22.08■■□□□ 1.13
GRIA1-211ENST00000520353 ABCC8Q09428 1581 aa21.87■■□□□ 1.09
GRIA1-211ENST00000520353 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.08
GRIA1-211ENST00000520353 PRDM2Q13029 1718 aa21.78■■□□□ 1.08
GRIA1-211ENST00000520353 CFTRP13569 1480 aa21.76■■□□□ 1.07
GRIA1-211ENST00000520353 FAM9AQ8IZU1 332 aaPredicted RBP21.68■■□□□ 1.06
GRIA1-211ENST00000520353 CADPSQ9ULU8 1353 aa21.68■■□□□ 1.06
GRIA1-211ENST00000520353 SYNJ1O43426 1573 aa21.64■■□□□ 1.05
GRIA1-211ENST00000520353 EEA1Q15075 1411 aa21.63■■□□□ 1.05
GRIA1-211ENST00000520353 TOP2BQ02880 1626 aa21.6■■□□□ 1.05
GRIA1-211ENST00000520353 BIVM-ERCC5R4GMW8 1640 aa21.59■■□□□ 1.05
GRIA1-211ENST00000520353 LOC105371045A0A1W2PR82 267 aa21.58■■□□□ 1.05
GRIA1-211ENST00000520353 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
GRIA1-211ENST00000520353 SOGA1O94964 1423 aa21.46■■□□□ 1.03
GRIA1-211ENST00000520353 FANCD2Q9BXW9 1451 aa21.45■■□□□ 1.03
GRIA1-211ENST00000520353 CUX1P39880 1505 aa21.45■■□□□ 1.02
GRIA1-211ENST00000520353 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
GRIA1-211ENST00000520353 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
GRIA1-211ENST00000520353 NESP48681 1621 aa21.37■■□□□ 1.01
GRIA1-211ENST00000520353 CEP164Q9UPV0 1460 aa21.36■■□□□ 1.01
GRIA1-211ENST00000520353 EHMT2Q96KQ7 1210 aa21.34■■□□□ 1.01
GRIA1-211ENST00000520353 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
GRIA1-211ENST00000520353 DNMBPQ6XZF7 1577 aa21.32■■□□□ 1
GRIA1-211ENST00000520353 GOLGA3Q08378 1498 aa21.31■■□□□ 1
GRIA1-211ENST00000520353 KIF21BO75037 1637 aa21.29■■□□□ 1
GRIA1-211ENST00000520353 KIF27Q86VH2 1401 aa21.28■■□□□ 1
GRIA1-211ENST00000520353 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
GRIA1-211ENST00000520353 DNAJC5BQ9UF47 199 aa21.22■□□□□ 0.99
GRIA1-211ENST00000520353 TOPBP1Q92547 1522 aa21.22■□□□□ 0.99
GRIA1-211ENST00000520353 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
GRIA1-211ENST00000520353 UBTFP17480 764 aaKnown RBP21.21■□□□□ 0.99
GRIA1-211ENST00000520353 TNIKQ9UKE5 1360 aa21.21■□□□□ 0.99
GRIA1-211ENST00000520353 CUX2O14529 1486 aa21.15■□□□□ 0.98
GRIA1-211ENST00000520353 ERICH3Q5RHP9 1530 aa21.13■□□□□ 0.97
GRIA1-211ENST00000520353 URB2Q14146 1524 aaKnown RBP21.12■□□□□ 0.97
GRIA1-211ENST00000520353 POLA1P09884 1462 aaPredicted RBP21.1■□□□□ 0.97
GRIA1-211ENST00000520353 CEP162Q5TB80 1403 aa21.08■□□□□ 0.97
GRIA1-211ENST00000520353 MRC2Q9UBG0 1479 aa21.07■□□□□ 0.96
GRIA1-211ENST00000520353 ABCA10Q8WWZ4 1543 aa21.06■□□□□ 0.96
GRIA1-211ENST00000520353 PRXQ9BXM0 1461 aa21.05■□□□□ 0.96
GRIA1-211ENST00000520353 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
GRIA1-211ENST00000520353 RAD54L2Q9Y4B4 1467 aa21.01■□□□□ 0.95
GRIA1-211ENST00000520353 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
GRIA1-211ENST00000520353 WDR97A6NE52 1622 aa21■□□□□ 0.95
GRIA1-211ENST00000520353 IGF1RP08069 1367 aa20.95■□□□□ 0.94
GRIA1-211ENST00000520353 CUL7Q14999 1698 aa20.94■□□□□ 0.94
GRIA1-211ENST00000520353 CLIP1P30622 1438 aa20.93■□□□□ 0.94
GRIA1-211ENST00000520353 CARMIL1Q5VZK9 1371 aa20.92■□□□□ 0.94
GRIA1-211ENST00000520353 WDR62O43379 1518 aa20.92■□□□□ 0.94
GRIA1-211ENST00000520353 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.93
GRIA1-211ENST00000520353 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
GRIA1-211ENST00000520353 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
GRIA1-211ENST00000520353 TRIM26Q12899 539 aaPredicted RBP20.85■□□□□ 0.93
GRIA1-211ENST00000520353 IFT140Q96RY7 1462 aa20.84■□□□□ 0.93
GRIA1-211ENST00000520353 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
GRIA1-211ENST00000520353 PCGF6Q9BYE7 350 aa20.81■□□□□ 0.92
GRIA1-211ENST00000520353 TDRD9Q8NDG6 1382 aaKnown RBP20.81■□□□□ 0.92
GRIA1-211ENST00000520353 PBRM1Q86U86 1689 aa20.78■□□□□ 0.92
GRIA1-211ENST00000520353 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
GRIA1-211ENST00000520353 VPS8Q8N3P4 1428 aa20.76■□□□□ 0.91
GRIA1-211ENST00000520353 APLP2Q06481 763 aa20.73■□□□□ 0.91
GRIA1-211ENST00000520353 CTTNBP2Q8WZ74 1663 aa20.72■□□□□ 0.91
GRIA1-211ENST00000520353 GRIN2BQ13224 1484 aa20.7■□□□□ 0.9
GRIA1-211ENST00000520353 AQRO60306 1485 aaKnown RBP eCLIP20.65■□□□□ 0.9
GRIA1-211ENST00000520353 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
GRIA1-211ENST00000520353 ARAP1Q96P48 1450 aa20.64■□□□□ 0.89
GRIA1-211ENST00000520353 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
GRIA1-211ENST00000520353 EIF4G3O43432 1585 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms