RNA–Protein interactions for RNA: ENST00000520295.5

CDK16-215, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-215ENST00000520295 NISCHQ9Y2I1 1504 aa37.92■■■■□ 3.66
CDK16-215ENST00000520295 CCDC180Q9P1Z9 1646 aa33.89■■■■□ 3.02
CDK16-215ENST00000520295 ABCC9O60706 1549 aa33.45■■■□□ 2.95
CDK16-215ENST00000520295 RB1CC1Q8TDY2 1594 aa32.05■■■□□ 2.72
CDK16-215ENST00000520295 NACADO15069 1562 aa31.94■■■□□ 2.7
CDK16-215ENST00000520295 DCAF8L2P0C7V8 631 aa31.76■■■□□ 2.67
CDK16-215ENST00000520295 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
CDK16-215ENST00000520295 DNAJC5BQ9UF47 199 aa31.51■■■□□ 2.63
CDK16-215ENST00000520295 ZCCHC6Q5VYS8 1495 aaKnown RBP31.51■■■□□ 2.63
CDK16-215ENST00000520295 DCAF1Q9Y4B6 1507 aa31.38■■■□□ 2.61
CDK16-215ENST00000520295 UNC13AQ9UPW8 1703 aa31.35■■■□□ 2.61
CDK16-215ENST00000520295 PABPN1Q86U42 306 aaKnown RBP eCLIP31.19■■■□□ 2.58
CDK16-215ENST00000520295 BICRAQ9NZM4 1560 aa31.11■■■□□ 2.57
CDK16-215ENST00000520295 SCRIBQ14160 1630 aa30.85■■■□□ 2.53
CDK16-215ENST00000520295 SHROOM4Q9ULL8 1493 aa30.75■■■□□ 2.51
CDK16-215ENST00000520295 EIF4G1Q04637 1599 aaKnown RBP30.3■■■□□ 2.44
CDK16-215ENST00000520295 CC2D2AQ9P2K1 1620 aa30.27■■■□□ 2.44
CDK16-215ENST00000520295 CECR2Q9BXF3 1484 aa30.11■■■□□ 2.41
CDK16-215ENST00000520295 SMARCA4P51532 1647 aa29.5■■■□□ 2.31
CDK16-215ENST00000520295 NCAPD3P42695 1498 aa29.48■■■□□ 2.31
CDK16-215ENST00000520295 ATAD2BQ9ULI0 1458 aa29.42■■■□□ 2.3
CDK16-215ENST00000520295 BAZ1AQ9NRL2 1556 aaPredicted RBP29.41■■■□□ 2.3
CDK16-215ENST00000520295 SMARCA2P51531 1590 aa29.37■■■□□ 2.29
CDK16-215ENST00000520295 HMGXB3Q12766 1538 aa29.3■■■□□ 2.28
CDK16-215ENST00000520295 PEG3Q9GZU2 1588 aa29.24■■■□□ 2.27
CDK16-215ENST00000520295 MROH2BQ7Z745 1585 aa29.21■■■□□ 2.27
CDK16-215ENST00000520295 BAZ1BQ9UIG0 1483 aaKnown RBP29.15■■■□□ 2.26
CDK16-215ENST00000520295 DNAJC5Q9H3Z4 198 aa29.11■■■□□ 2.25
CDK16-215ENST00000520295 WIZO95785 1651 aa28.88■■■□□ 2.21
CDK16-215ENST00000520295 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
CDK16-215ENST00000520295 NESP48681 1621 aa28.85■■■□□ 2.21
CDK16-215ENST00000520295 LAMC3Q9Y6N6 1575 aa28.75■■■□□ 2.19
CDK16-215ENST00000520295 RSF1Q96T23 1441 aaPredicted RBP28.75■■■□□ 2.19
CDK16-215ENST00000520295 CUX2O14529 1486 aa28.71■■■□□ 2.19
CDK16-215ENST00000520295 CADPSQ9ULU8 1353 aa28.58■■■□□ 2.17
CDK16-215ENST00000520295 TOP2AP11388 1531 aaKnown RBP28.55■■■□□ 2.16
CDK16-215ENST00000520295 PDS5BQ9NTI5 1447 aa28.55■■■□□ 2.16
CDK16-215ENST00000520295 KIF21AQ7Z4S6 1674 aa28.52■■■□□ 2.16
CDK16-215ENST00000520295 THOC2Q8NI27 1593 aaKnown RBP28.52■■■□□ 2.16
CDK16-215ENST00000520295 CFTRP13569 1480 aa28.34■■■□□ 2.13
CDK16-215ENST00000520295 MRC2Q9UBG0 1479 aa28.28■■■□□ 2.12
CDK16-215ENST00000520295 FANCD2Q9BXW9 1451 aa28.25■■■□□ 2.11
CDK16-215ENST00000520295 CEP164Q9UPV0 1460 aa28.24■■■□□ 2.11
CDK16-215ENST00000520295 WDR62O43379 1518 aa28.22■■■□□ 2.11
CDK16-215ENST00000520295 CCDC88BA6NC98 1476 aa28.21■■■□□ 2.11
CDK16-215ENST00000520295 PRDM2Q13029 1718 aa28.12■■■□□ 2.09
CDK16-215ENST00000520295 URB2Q14146 1524 aaKnown RBP28■■■□□ 2.07
CDK16-215ENST00000520295 TOPBP1Q92547 1522 aa27.77■■■□□ 2.04
CDK16-215ENST00000520295 ABCC8Q09428 1581 aa27.74■■■□□ 2.03
CDK16-215ENST00000520295 DNMBPQ6XZF7 1577 aa27.7■■■□□ 2.03
CDK16-215ENST00000520295 SUPT5HO00267 1087 aaKnown RBP27.7■■■□□ 2.02
CDK16-215ENST00000520295 IFT140Q96RY7 1462 aa27.67■■■□□ 2.02
CDK16-215ENST00000520295 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
CDK16-215ENST00000520295 TARBP1Q13395 1621 aaKnown RBP27.51■■□□□ 1.99
CDK16-215ENST00000520295 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
CDK16-215ENST00000520295 TRIM41Q8WV44 630 aa27.5■■□□□ 1.99
CDK16-215ENST00000520295 EIF4G3O43432 1585 aaKnown RBP27.47■■□□□ 1.99
CDK16-215ENST00000520295 OSCARQ8IYS5 282 aa27.43■■□□□ 1.98
CDK16-215ENST00000520295 CUX1P39880 1505 aa27.42■■□□□ 1.98
CDK16-215ENST00000520295 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
CDK16-215ENST00000520295 AQRO60306 1485 aaKnown RBP eCLIP27.38■■□□□ 1.978e-9■■■■■ 38.5
CDK16-215ENST00000520295 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
CDK16-215ENST00000520295 SOGA1O94964 1423 aa27.37■■□□□ 1.97
CDK16-215ENST00000520295 WDR97A6NE52 1622 aa27.27■■□□□ 1.96
CDK16-215ENST00000520295 TDRD9Q8NDG6 1382 aaKnown RBP27.25■■□□□ 1.95
CDK16-215ENST00000520295 CHD1O14646 1710 aa27.19■■□□□ 1.94
CDK16-215ENST00000520295 BIVM-ERCC5R4GMW8 1640 aa27.11■■□□□ 1.93
CDK16-215ENST00000520295 SNAPC4Q5SXM2 1469 aa27.11■■□□□ 1.93
CDK16-215ENST00000520295 ABCA10Q8WWZ4 1543 aa27.11■■□□□ 1.93
CDK16-215ENST00000520295 WRNQ14191 1432 aaPredicted RBP eCLIP27.1■■□□□ 1.93
CDK16-215ENST00000520295 TOP2BQ02880 1626 aa27.1■■□□□ 1.93
CDK16-215ENST00000520295 GRIN2BQ13224 1484 aa27.1■■□□□ 1.93
CDK16-215ENST00000520295 FBLN2P98095 1184 aa27.08■■□□□ 1.93
CDK16-215ENST00000520295 MAGI1Q96QZ7 1491 aaPredicted RBP27.07■■□□□ 1.92
CDK16-215ENST00000520295 SYNJ1O43426 1573 aa27.07■■□□□ 1.92
CDK16-215ENST00000520295 GAPVD1Q14C86 1478 aa27.06■■□□□ 1.92
CDK16-215ENST00000520295 RIMBP3CA6NJZ7 1639 aa27.05■■□□□ 1.92
CDK16-215ENST00000520295 RIMBP3BA6NNM3 1639 aa27.05■■□□□ 1.92
CDK16-215ENST00000520295 RIMBP3Q9UFD9 1639 aa27.05■■□□□ 1.92
CDK16-215ENST00000520295 ABCA5Q8WWZ7 1642 aa27.04■■□□□ 1.92
CDK16-215ENST00000520295 PBRM1Q86U86 1689 aa27.04■■□□□ 1.92
CDK16-215ENST00000520295 ARHGEF11O15085 1522 aa27■■□□□ 1.91
CDK16-215ENST00000520295 CHMP7Q8WUX9 453 aaPredicted RBP26.97■■□□□ 1.91
CDK16-215ENST00000520295 SYNJ2O15056 1496 aa26.97■■□□□ 1.91
CDK16-215ENST00000520295 CLASP1Q7Z460 1538 aa26.9■■□□□ 1.9
CDK16-215ENST00000520295 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
CDK16-215ENST00000520295 ERICH3Q5RHP9 1530 aa26.78■■□□□ 1.88
CDK16-215ENST00000520295 GRIN2AQ12879 1464 aa26.76■■□□□ 1.87
CDK16-215ENST00000520295 ARAP1Q96P48 1450 aa26.76■■□□□ 1.87
CDK16-215ENST00000520295 CYB5RLQ6IPT4 315 aa26.75■■□□□ 1.87
CDK16-215ENST00000520295 FHAD1B1AJZ9 1412 aa26.73■■□□□ 1.87
CDK16-215ENST00000520295 NUP160Q12769 1436 aa26.65■■□□□ 1.86
CDK16-215ENST00000520295 CEP170Q5SW79 1584 aa26.65■■□□□ 1.86
CDK16-215ENST00000520295 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
CDK16-215ENST00000520295 SHROOM2Q13796 1616 aa26.52■■□□□ 1.84
CDK16-215ENST00000520295 IGF1RP08069 1367 aa26.51■■□□□ 1.83
CDK16-215ENST00000520295 ERCC6L2Q5T890 1561 aa26.48■■□□□ 1.83
CDK16-215ENST00000520295 CUL7Q14999 1698 aa26.47■■□□□ 1.83
CDK16-215ENST00000520295 RUSC2Q8N2Y8 1516 aa26.41■■□□□ 1.82
CDK16-215ENST00000520295 JPH4Q96JJ6 628 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms