RNA–Protein interactions for RNA: ENST00000520245.5

TSPAN18-205, Transcript of tetraspanin 18, humanhuman

TSL 4

Gene TSPAN18, Length 981 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-205ENST00000520245 NISCHQ9Y2I1 1504 aa40.39■■■■■ 4.06
TSPAN18-205ENST00000520245 CCDC180Q9P1Z9 1646 aa36.13■■■■□ 3.37
TSPAN18-205ENST00000520245 ABCC9O60706 1549 aa35.36■■■■□ 3.25
TSPAN18-205ENST00000520245 RB1CC1Q8TDY2 1594 aa33.95■■■■□ 3.03
TSPAN18-205ENST00000520245 NACADO15069 1562 aa33.84■■■■□ 3.01
TSPAN18-205ENST00000520245 ZCCHC6Q5VYS8 1495 aaKnown RBP33.66■■■□□ 2.98
TSPAN18-205ENST00000520245 DCAF8L2P0C7V8 631 aa33.57■■■□□ 2.96
TSPAN18-205ENST00000520245 UNC13AQ9UPW8 1703 aa33.55■■■□□ 2.96
TSPAN18-205ENST00000520245 MYO15BQ96JP2 1530 aa33.53■■■□□ 2.96
TSPAN18-205ENST00000520245 DCAF1Q9Y4B6 1507 aa33.38■■■□□ 2.93
TSPAN18-205ENST00000520245 BICRAQ9NZM4 1560 aa33.05■■■□□ 2.88
TSPAN18-205ENST00000520245 SCRIBQ14160 1630 aa32.95■■■□□ 2.87
TSPAN18-205ENST00000520245 PABPN1Q86U42 306 aaKnown RBP eCLIP32.89■■■□□ 2.86
TSPAN18-205ENST00000520245 DNAJC5BQ9UF47 199 aa32.51■■■□□ 2.79
TSPAN18-205ENST00000520245 SHROOM4Q9ULL8 1493 aa32.49■■■□□ 2.79
TSPAN18-205ENST00000520245 EIF4G1Q04637 1599 aaKnown RBP32.13■■■□□ 2.73
TSPAN18-205ENST00000520245 CC2D2AQ9P2K1 1620 aa32.07■■■□□ 2.72
TSPAN18-205ENST00000520245 CECR2Q9BXF3 1484 aa31.73■■■□□ 2.67
TSPAN18-205ENST00000520245 SMARCA4P51532 1647 aa31.48■■■□□ 2.63
TSPAN18-205ENST00000520245 BAZ1AQ9NRL2 1556 aaPredicted RBP31.31■■■□□ 2.6
TSPAN18-205ENST00000520245 ATAD2BQ9ULI0 1458 aa31.21■■■□□ 2.59
TSPAN18-205ENST00000520245 SMARCA2P51531 1590 aa31.17■■■□□ 2.58
TSPAN18-205ENST00000520245 MROH2BQ7Z745 1585 aa31.17■■■□□ 2.58
TSPAN18-205ENST00000520245 NCAPD3P42695 1498 aa31.14■■■□□ 2.58
TSPAN18-205ENST00000520245 PEG3Q9GZU2 1588 aa31.13■■■□□ 2.57
TSPAN18-205ENST00000520245 HMGXB3Q12766 1538 aa31.12■■■□□ 2.57
TSPAN18-205ENST00000520245 BAZ1BQ9UIG0 1483 aaKnown RBP30.95■■■□□ 2.54
TSPAN18-205ENST00000520245 WIZO95785 1651 aa30.94■■■□□ 2.54
TSPAN18-205ENST00000520245 RSF1Q96T23 1441 aaPredicted RBP30.65■■■□□ 2.5
TSPAN18-205ENST00000520245 NESP48681 1621 aa30.61■■■□□ 2.49
TSPAN18-205ENST00000520245 TOP2AP11388 1531 aaKnown RBP30.5■■■□□ 2.47
TSPAN18-205ENST00000520245 LAMC3Q9Y6N6 1575 aa30.47■■■□□ 2.47
TSPAN18-205ENST00000520245 KIF21AQ7Z4S6 1674 aa30.43■■■□□ 2.46
TSPAN18-205ENST00000520245 ERCC6Q03468 1493 aa30.42■■■□□ 2.46
TSPAN18-205ENST00000520245 THOC2Q8NI27 1593 aaKnown RBP30.29■■■□□ 2.44
TSPAN18-205ENST00000520245 PRDM2Q13029 1718 aa30.19■■■□□ 2.42
TSPAN18-205ENST00000520245 CADPSQ9ULU8 1353 aa30.19■■■□□ 2.42
TSPAN18-205ENST00000520245 CUX2O14529 1486 aa30.16■■■□□ 2.42
TSPAN18-205ENST00000520245 PDS5BQ9NTI5 1447 aa30.1■■■□□ 2.41
TSPAN18-205ENST00000520245 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
TSPAN18-205ENST00000520245 CFTRP13569 1480 aa30.06■■■□□ 2.4
TSPAN18-205ENST00000520245 FANCD2Q9BXW9 1451 aa29.95■■■□□ 2.39
TSPAN18-205ENST00000520245 CEP164Q9UPV0 1460 aa29.94■■■□□ 2.38
TSPAN18-205ENST00000520245 MRC2Q9UBG0 1479 aa29.93■■■□□ 2.38
TSPAN18-205ENST00000520245 WDR62O43379 1518 aa29.91■■■□□ 2.38
TSPAN18-205ENST00000520245 URB2Q14146 1524 aaKnown RBP29.74■■■□□ 2.35
TSPAN18-205ENST00000520245 SUPT5HO00267 1087 aaKnown RBP29.66■■■□□ 2.34
TSPAN18-205ENST00000520245 TOPBP1Q92547 1522 aa29.5■■■□□ 2.31
TSPAN18-205ENST00000520245 DNMBPQ6XZF7 1577 aa29.49■■■□□ 2.31
TSPAN18-205ENST00000520245 ABCC8Q09428 1581 aa29.35■■■□□ 2.29
TSPAN18-205ENST00000520245 TARBP1Q13395 1621 aaKnown RBP29.29■■■□□ 2.28
TSPAN18-205ENST00000520245 CUX1P39880 1505 aa29.27■■■□□ 2.28
TSPAN18-205ENST00000520245 DNAJC5Q9H3Z4 198 aa29.27■■■□□ 2.28
TSPAN18-205ENST00000520245 IFT140Q96RY7 1462 aa29.27■■■□□ 2.28
TSPAN18-205ENST00000520245 ZNF608Q9ULD9 1512 aaPredicted RBP29.25■■■□□ 2.27
TSPAN18-205ENST00000520245 EIF4G3O43432 1585 aaKnown RBP29.25■■■□□ 2.27
TSPAN18-205ENST00000520245 POLA1P09884 1462 aaPredicted RBP29.23■■■□□ 2.27
TSPAN18-205ENST00000520245 FGD5Q6ZNL6 1462 aa29.16■■■□□ 2.26
TSPAN18-205ENST00000520245 WDR97A6NE52 1622 aa29.16■■■□□ 2.26
TSPAN18-205ENST00000520245 RAD54L2Q9Y4B4 1467 aa29.11■■■□□ 2.25
TSPAN18-205ENST00000520245 BIVM-ERCC5R4GMW8 1640 aa29.06■■■□□ 2.24
TSPAN18-205ENST00000520245 SYNJ1O43426 1573 aa29.04■■■□□ 2.24
TSPAN18-205ENST00000520245 CHD1O14646 1710 aa29■■■□□ 2.23
TSPAN18-205ENST00000520245 AQRO60306 1485 aaKnown RBP eCLIP28.99■■■□□ 2.23
TSPAN18-205ENST00000520245 TOP2BQ02880 1626 aa28.98■■■□□ 2.23
TSPAN18-205ENST00000520245 SOGA1O94964 1423 aa28.98■■■□□ 2.23
TSPAN18-205ENST00000520245 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
TSPAN18-205ENST00000520245 WRNQ14191 1432 aaPredicted RBP eCLIP28.89■■■□□ 2.22
TSPAN18-205ENST00000520245 ABCA5Q8WWZ7 1642 aa28.87■■■□□ 2.21
TSPAN18-205ENST00000520245 TDRD9Q8NDG6 1382 aaKnown RBP28.86■■■□□ 2.21
TSPAN18-205ENST00000520245 ABCA10Q8WWZ4 1543 aa28.82■■■□□ 2.2
TSPAN18-205ENST00000520245 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
TSPAN18-205ENST00000520245 GRIN2BQ13224 1484 aa28.71■■■□□ 2.19
TSPAN18-205ENST00000520245 GAPVD1Q14C86 1478 aa28.71■■■□□ 2.19
TSPAN18-205ENST00000520245 OSCARQ8IYS5 282 aa28.69■■■□□ 2.18
TSPAN18-205ENST00000520245 MAGI1Q96QZ7 1491 aaPredicted RBP28.67■■■□□ 2.18
TSPAN18-205ENST00000520245 RIMBP3CA6NJZ7 1639 aa28.61■■■□□ 2.17
TSPAN18-205ENST00000520245 RIMBP3BA6NNM3 1639 aa28.61■■■□□ 2.17
TSPAN18-205ENST00000520245 RIMBP3Q9UFD9 1639 aa28.61■■■□□ 2.17
TSPAN18-205ENST00000520245 ADAMTS12P58397 1594 aa28.59■■■□□ 2.17
TSPAN18-205ENST00000520245 SYNJ2O15056 1496 aa28.56■■■□□ 2.16
TSPAN18-205ENST00000520245 CLASP1Q7Z460 1538 aa28.53■■■□□ 2.16
TSPAN18-205ENST00000520245 FBLN2P98095 1184 aa28.53■■■□□ 2.16
TSPAN18-205ENST00000520245 ARHGEF11O15085 1522 aa28.5■■■□□ 2.15
TSPAN18-205ENST00000520245 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
TSPAN18-205ENST00000520245 GRIN2AQ12879 1464 aa28.4■■■□□ 2.14
TSPAN18-205ENST00000520245 CHMP7Q8WUX9 453 aaPredicted RBP28.4■■■□□ 2.14
TSPAN18-205ENST00000520245 CEP170Q5SW79 1584 aa28.38■■■□□ 2.13
TSPAN18-205ENST00000520245 FHAD1B1AJZ9 1412 aa28.33■■■□□ 2.13
TSPAN18-205ENST00000520245 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
TSPAN18-205ENST00000520245 CUL7Q14999 1698 aa28.29■■■□□ 2.12
TSPAN18-205ENST00000520245 ARAP1Q96P48 1450 aa28.27■■■□□ 2.12
TSPAN18-205ENST00000520245 NUP160Q12769 1436 aa28.26■■■□□ 2.11
TSPAN18-205ENST00000520245 KIF27Q86VH2 1401 aa28.25■■■□□ 2.11
TSPAN18-205ENST00000520245 SHROOM2Q13796 1616 aa28.21■■■□□ 2.11
TSPAN18-205ENST00000520245 RUSC2Q8N2Y8 1516 aa28.2■■■□□ 2.1
TSPAN18-205ENST00000520245 ERCC6L2Q5T890 1561 aa28.18■■■□□ 2.1
TSPAN18-205ENST00000520245 IGF1RP08069 1367 aa28.13■■■□□ 2.09
TSPAN18-205ENST00000520245 CYB5RLQ6IPT4 315 aa28.04■■■□□ 2.08
TSPAN18-205ENST00000520245 CARMIL1Q5VZK9 1371 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms