RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 NISCHQ9Y2I1 1504 aa50.31■■■■■ 5.64
HDAC2-207ENST00000520170 ABCC9O60706 1549 aa45.39■■■■■ 4.86
HDAC2-207ENST00000520170 CCDC180Q9P1Z9 1646 aa45.19■■■■■ 4.82
HDAC2-207ENST00000520170 RB1CC1Q8TDY2 1594 aa43.1■■■■■ 4.49
HDAC2-207ENST00000520170 NACADO15069 1562 aa42.76■■■■■ 4.44
HDAC2-207ENST00000520170 DNAJC5BQ9UF47 199 aa42.7■■■■■ 4.43
HDAC2-207ENST00000520170 DCAF8L2P0C7V8 631 aa42.67■■■■■ 4.42
HDAC2-207ENST00000520170 PABPN1Q86U42 306 aaKnown RBP eCLIP42.27■■■■■ 4.36
HDAC2-207ENST00000520170 UNC13AQ9UPW8 1703 aa42.2■■■■■ 4.35
HDAC2-207ENST00000520170 MYO15BQ96JP2 1530 aa42.06■■■■■ 4.32
HDAC2-207ENST00000520170 BICRAQ9NZM4 1560 aa41.84■■■■■ 4.29
HDAC2-207ENST00000520170 ZCCHC6Q5VYS8 1495 aaKnown RBP41.64■■■■■ 4.26
HDAC2-207ENST00000520170 DCAF1Q9Y4B6 1507 aa41.49■■■■■ 4.23
HDAC2-207ENST00000520170 SCRIBQ14160 1630 aa41.23■■■■■ 4.19
HDAC2-207ENST00000520170 SHROOM4Q9ULL8 1493 aa41.18■■■■■ 4.18
HDAC2-207ENST00000520170 CC2D2AQ9P2K1 1620 aa40.98■■■■■ 4.15
HDAC2-207ENST00000520170 CECR2Q9BXF3 1484 aa40.87■■■■■ 4.13
HDAC2-207ENST00000520170 EIF4G1Q04637 1599 aaKnown RBP40.83■■■■■ 4.13
HDAC2-207ENST00000520170 NCAPD3P42695 1498 aa39.46■■■■□ 3.91
HDAC2-207ENST00000520170 ATAD2BQ9ULI0 1458 aa39.35■■■■□ 3.89
HDAC2-207ENST00000520170 SMARCA4P51532 1647 aa39.29■■■■□ 3.88
HDAC2-207ENST00000520170 DNAJC5Q9H3Z4 198 aa39.28■■■■□ 3.88
HDAC2-207ENST00000520170 SMARCA2P51531 1590 aa39.23■■■■□ 3.87
HDAC2-207ENST00000520170 ERCC6Q03468 1493 aa39.19■■■■□ 3.86
HDAC2-207ENST00000520170 HMGXB3Q12766 1538 aa39.14■■■■□ 3.86
HDAC2-207ENST00000520170 CUX2O14529 1486 aa39.11■■■■□ 3.85
HDAC2-207ENST00000520170 BAZ1AQ9NRL2 1556 aaPredicted RBP39.05■■■■□ 3.84
HDAC2-207ENST00000520170 BAZ1BQ9UIG0 1483 aaKnown RBP38.98■■■■□ 3.83
HDAC2-207ENST00000520170 NESP48681 1621 aa38.95■■■■□ 3.83
HDAC2-207ENST00000520170 PEG3Q9GZU2 1588 aa38.85■■■■□ 3.81
HDAC2-207ENST00000520170 MROH2BQ7Z745 1585 aa38.78■■■■□ 3.8
HDAC2-207ENST00000520170 LAMC3Q9Y6N6 1575 aa38.61■■■■□ 3.77
HDAC2-207ENST00000520170 THOC2Q8NI27 1593 aaKnown RBP38.53■■■■□ 3.76
HDAC2-207ENST00000520170 KIF21AQ7Z4S6 1674 aa38.46■■■■□ 3.75
HDAC2-207ENST00000520170 PDS5BQ9NTI5 1447 aa38.4■■■■□ 3.74
HDAC2-207ENST00000520170 WIZO95785 1651 aa38.35■■■■□ 3.73
HDAC2-207ENST00000520170 CADPSQ9ULU8 1353 aa38.28■■■■□ 3.72
HDAC2-207ENST00000520170 MRC2Q9UBG0 1479 aa38.08■■■■□ 3.69
HDAC2-207ENST00000520170 WDR62O43379 1518 aa37.97■■■■□ 3.67
HDAC2-207ENST00000520170 RSF1Q96T23 1441 aaPredicted RBP37.93■■■■□ 3.66
HDAC2-207ENST00000520170 CEP164Q9UPV0 1460 aa37.91■■■■□ 3.66
HDAC2-207ENST00000520170 FANCD2Q9BXW9 1451 aa37.87■■■■□ 3.65
HDAC2-207ENST00000520170 CFTRP13569 1480 aa37.8■■■■□ 3.64
HDAC2-207ENST00000520170 TOP2AP11388 1531 aaKnown RBP37.8■■■■□ 3.64
HDAC2-207ENST00000520170 TRIM41Q8WV44 630 aa37.59■■■■□ 3.61
HDAC2-207ENST00000520170 URB2Q14146 1524 aaKnown RBP37.56■■■■□ 3.6
HDAC2-207ENST00000520170 PRDM2Q13029 1718 aa37.47■■■■□ 3.59
HDAC2-207ENST00000520170 CCDC88BA6NC98 1476 aa37.4■■■■□ 3.58
HDAC2-207ENST00000520170 OSCARQ8IYS5 282 aa37.37■■■■□ 3.57
HDAC2-207ENST00000520170 IFT140Q96RY7 1462 aa37.14■■■■□ 3.54
HDAC2-207ENST00000520170 TOPBP1Q92547 1522 aa37.13■■■■□ 3.53
HDAC2-207ENST00000520170 ZNF608Q9ULD9 1512 aaPredicted RBP37.13■■■■□ 3.53
HDAC2-207ENST00000520170 ABCC8Q09428 1581 aa37.03■■■■□ 3.52
HDAC2-207ENST00000520170 DNMBPQ6XZF7 1577 aa36.97■■■■□ 3.51
HDAC2-207ENST00000520170 EIF4G3O43432 1585 aaKnown RBP36.91■■■■□ 3.5
HDAC2-207ENST00000520170 RIMBP3CA6NJZ7 1639 aa36.88■■■■□ 3.5
HDAC2-207ENST00000520170 RIMBP3BA6NNM3 1639 aa36.88■■■■□ 3.5
HDAC2-207ENST00000520170 RIMBP3Q9UFD9 1639 aa36.88■■■■□ 3.5
HDAC2-207ENST00000520170 TARBP1Q13395 1621 aaKnown RBP36.81■■■■□ 3.48
HDAC2-207ENST00000520170 AQRO60306 1485 aaKnown RBP eCLIP36.79■■■■□ 3.483e-7■■■■■ 30.5
HDAC2-207ENST00000520170 POLA1P09884 1462 aaPredicted RBP36.73■■■■□ 3.47
HDAC2-207ENST00000520170 ARHGEF11O15085 1522 aa36.73■■■■□ 3.47
HDAC2-207ENST00000520170 CHD1O14646 1710 aa36.71■■■■□ 3.47
HDAC2-207ENST00000520170 FBLN2P98095 1184 aa36.64■■■■□ 3.46
HDAC2-207ENST00000520170 RAD54L2Q9Y4B4 1467 aa36.63■■■■□ 3.45
HDAC2-207ENST00000520170 SOGA1O94964 1423 aa36.59■■■■□ 3.45
HDAC2-207ENST00000520170 TDRD9Q8NDG6 1382 aaKnown RBP36.55■■■■□ 3.44
HDAC2-207ENST00000520170 CYB5RLQ6IPT4 315 aa36.54■■■■□ 3.44
HDAC2-207ENST00000520170 FGD5Q6ZNL6 1462 aa36.5■■■■□ 3.43
HDAC2-207ENST00000520170 CUX1P39880 1505 aa36.45■■■■□ 3.43
HDAC2-207ENST00000520170 SNAPC4Q5SXM2 1469 aa36.39■■■■□ 3.42
HDAC2-207ENST00000520170 WDR97A6NE52 1622 aa36.37■■■■□ 3.41
HDAC2-207ENST00000520170 ARAP1Q96P48 1450 aa36.36■■■■□ 3.41
HDAC2-207ENST00000520170 CHMP7Q8WUX9 453 aaPredicted RBP36.31■■■■□ 3.4
HDAC2-207ENST00000520170 GRIN2BQ13224 1484 aa36.26■■■■□ 3.4
HDAC2-207ENST00000520170 MAGI1Q96QZ7 1491 aaPredicted RBP36.26■■■■□ 3.4
HDAC2-207ENST00000520170 SUPT5HO00267 1087 aaKnown RBP36.26■■■■□ 3.4
HDAC2-207ENST00000520170 CLASP1Q7Z460 1538 aa36.21■■■■□ 3.39
HDAC2-207ENST00000520170 SYNJ1O43426 1573 aa36.2■■■■□ 3.39
HDAC2-207ENST00000520170 TRHP20396 242 aaPredicted RBP36.2■■■■□ 3.39
HDAC2-207ENST00000520170 PBRM1Q86U86 1689 aa36.16■■■■□ 3.38
HDAC2-207ENST00000520170 SYNJ2O15056 1496 aa36.15■■■■□ 3.38
HDAC2-207ENST00000520170 GAPVD1Q14C86 1478 aa36.14■■■■□ 3.38
HDAC2-207ENST00000520170 ABCA10Q8WWZ4 1543 aa36.05■■■■□ 3.36
HDAC2-207ENST00000520170 ABCA5Q8WWZ7 1642 aa36.01■■■■□ 3.36
HDAC2-207ENST00000520170 WRNQ14191 1432 aaPredicted RBP eCLIP35.91■■■■□ 3.34
HDAC2-207ENST00000520170 TOP2BQ02880 1626 aa35.82■■■■□ 3.32
HDAC2-207ENST00000520170 BIVM-ERCC5R4GMW8 1640 aa35.82■■■■□ 3.32
HDAC2-207ENST00000520170 GRIN2AQ12879 1464 aa35.8■■■■□ 3.32
HDAC2-207ENST00000520170 ADAMTS12P58397 1594 aa35.76■■■■□ 3.31
HDAC2-207ENST00000520170 CEP170Q5SW79 1584 aa35.69■■■■□ 3.3
HDAC2-207ENST00000520170 ERCC6L2Q5T890 1561 aa35.68■■■■□ 3.3
HDAC2-207ENST00000520170 FHAD1B1AJZ9 1412 aa35.66■■■■□ 3.3
HDAC2-207ENST00000520170 NUP160Q12769 1436 aa35.66■■■■□ 3.3
HDAC2-207ENST00000520170 ERICH3Q5RHP9 1530 aa35.59■■■■□ 3.29
HDAC2-207ENST00000520170 SHROOM2Q13796 1616 aa35.53■■■■□ 3.28
HDAC2-207ENST00000520170 PRG4Q92954 1404 aaPredicted RBP35.38■■■■□ 3.25
HDAC2-207ENST00000520170 JPH4Q96JJ6 628 aa35.36■■■■□ 3.25
HDAC2-207ENST00000520170 RUSC2Q8N2Y8 1516 aa35.25■■■■□ 3.23
HDAC2-207ENST00000520170 AEBP2Q6ZN18 517 aaPredicted RBP35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms