RNA–Protein interactions for RNA: ENST00000520014.1

TMEM55A-204, humanhuman

TSL 5

Gene TMEM55A, Length 838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-204ENST00000520014 NISCHQ9Y2I1 1504 aa34.55■■■■□ 3.12
TMEM55A-204ENST00000520014 CCDC180Q9P1Z9 1646 aa31.06■■■□□ 2.56
TMEM55A-204ENST00000520014 ABCC9O60706 1549 aa30.48■■■□□ 2.47
TMEM55A-204ENST00000520014 RB1CC1Q8TDY2 1594 aa29.26■■■□□ 2.28
TMEM55A-204ENST00000520014 NACADO15069 1562 aa29.16■■■□□ 2.26
TMEM55A-204ENST00000520014 MYO15BQ96JP2 1530 aa28.96■■■□□ 2.23
TMEM55A-204ENST00000520014 UNC13AQ9UPW8 1703 aa28.87■■■□□ 2.21
TMEM55A-204ENST00000520014 ZCCHC6Q5VYS8 1495 aaKnown RBP28.75■■■□□ 2.19
TMEM55A-204ENST00000520014 DCAF1Q9Y4B6 1507 aa28.67■■■□□ 2.18
TMEM55A-204ENST00000520014 BICRAQ9NZM4 1560 aa28.56■■■□□ 2.16
TMEM55A-204ENST00000520014 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
TMEM55A-204ENST00000520014 DNAJC5BQ9UF47 199 aa28.38■■■□□ 2.13
TMEM55A-204ENST00000520014 PABPN1Q86U42 306 aaKnown RBP eCLIP28.27■■■□□ 2.12
TMEM55A-204ENST00000520014 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
TMEM55A-204ENST00000520014 SCRIBQ14160 1630 aa28.12■■■□□ 2.09
TMEM55A-204ENST00000520014 EIF4G1Q04637 1599 aaKnown RBP27.73■■■□□ 2.03
TMEM55A-204ENST00000520014 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.03
TMEM55A-204ENST00000520014 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.99
TMEM55A-204ENST00000520014 SMARCA4P51532 1647 aa26.95■■□□□ 1.91
TMEM55A-204ENST00000520014 NCAPD3P42695 1498 aa26.88■■□□□ 1.89
TMEM55A-204ENST00000520014 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
TMEM55A-204ENST00000520014 HMGXB3Q12766 1538 aa26.8■■□□□ 1.88
TMEM55A-204ENST00000520014 PEG3Q9GZU2 1588 aa26.79■■□□□ 1.88
TMEM55A-204ENST00000520014 BAZ1AQ9NRL2 1556 aaPredicted RBP26.79■■□□□ 1.88
TMEM55A-204ENST00000520014 SMARCA2P51531 1590 aa26.77■■□□□ 1.88
TMEM55A-204ENST00000520014 MROH2BQ7Z745 1585 aa26.62■■□□□ 1.85
TMEM55A-204ENST00000520014 BAZ1BQ9UIG0 1483 aaKnown RBP26.5■■□□□ 1.83
TMEM55A-204ENST00000520014 WIZO95785 1651 aa26.34■■□□□ 1.81
TMEM55A-204ENST00000520014 NESP48681 1621 aa26.34■■□□□ 1.81
TMEM55A-204ENST00000520014 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
TMEM55A-204ENST00000520014 CUX2O14529 1486 aa26.27■■□□□ 1.8
TMEM55A-204ENST00000520014 THOC2Q8NI27 1593 aaKnown RBP26.21■■□□□ 1.79
TMEM55A-204ENST00000520014 ERCC6Q03468 1493 aa26.21■■□□□ 1.79
TMEM55A-204ENST00000520014 KIF21AQ7Z4S6 1674 aa26.17■■□□□ 1.78
TMEM55A-204ENST00000520014 RSF1Q96T23 1441 aaPredicted RBP26.1■■□□□ 1.77
TMEM55A-204ENST00000520014 TOP2AP11388 1531 aaKnown RBP26.02■■□□□ 1.76
TMEM55A-204ENST00000520014 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
TMEM55A-204ENST00000520014 PDS5BQ9NTI5 1447 aa25.94■■□□□ 1.74
TMEM55A-204ENST00000520014 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
TMEM55A-204ENST00000520014 CFTRP13569 1480 aa25.84■■□□□ 1.73
TMEM55A-204ENST00000520014 WDR62O43379 1518 aa25.83■■□□□ 1.73
TMEM55A-204ENST00000520014 DNAJC5Q9H3Z4 198 aa25.82■■□□□ 1.72
TMEM55A-204ENST00000520014 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
TMEM55A-204ENST00000520014 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
TMEM55A-204ENST00000520014 FANCD2Q9BXW9 1451 aa25.71■■□□□ 1.71
TMEM55A-204ENST00000520014 CCDC88BA6NC98 1476 aa25.63■■□□□ 1.69
TMEM55A-204ENST00000520014 URB2Q14146 1524 aaKnown RBP25.57■■□□□ 1.68
TMEM55A-204ENST00000520014 TOPBP1Q92547 1522 aa25.31■■□□□ 1.64
TMEM55A-204ENST00000520014 DNMBPQ6XZF7 1577 aa25.28■■□□□ 1.64
TMEM55A-204ENST00000520014 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
TMEM55A-204ENST00000520014 IFT140Q96RY7 1462 aa25.2■■□□□ 1.62
TMEM55A-204ENST00000520014 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
TMEM55A-204ENST00000520014 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
TMEM55A-204ENST00000520014 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.62
TMEM55A-204ENST00000520014 POLA1P09884 1462 aaPredicted RBP25.07■■□□□ 1.6
TMEM55A-204ENST00000520014 CUX1P39880 1505 aa25■■□□□ 1.59
TMEM55A-204ENST00000520014 WDR97A6NE52 1622 aa24.99■■□□□ 1.59
TMEM55A-204ENST00000520014 CHD1O14646 1710 aa24.95■■□□□ 1.58
TMEM55A-204ENST00000520014 FGD5Q6ZNL6 1462 aa24.92■■□□□ 1.58
TMEM55A-204ENST00000520014 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
TMEM55A-204ENST00000520014 AQRO60306 1485 aaKnown RBP eCLIP24.87■■□□□ 1.578e-7■■■■■ 28.7
TMEM55A-204ENST00000520014 OSCARQ8IYS5 282 aa24.86■■□□□ 1.57
TMEM55A-204ENST00000520014 RIMBP3CA6NJZ7 1639 aa24.82■■□□□ 1.56
TMEM55A-204ENST00000520014 RIMBP3BA6NNM3 1639 aa24.82■■□□□ 1.56
TMEM55A-204ENST00000520014 RIMBP3Q9UFD9 1639 aa24.82■■□□□ 1.56
TMEM55A-204ENST00000520014 SOGA1O94964 1423 aa24.81■■□□□ 1.56
TMEM55A-204ENST00000520014 BIVM-ERCC5R4GMW8 1640 aa24.79■■□□□ 1.56
TMEM55A-204ENST00000520014 PBRM1Q86U86 1689 aa24.77■■□□□ 1.56
TMEM55A-204ENST00000520014 SUPT5HO00267 1087 aaKnown RBP24.76■■□□□ 1.55
TMEM55A-204ENST00000520014 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
TMEM55A-204ENST00000520014 TOP2BQ02880 1626 aa24.71■■□□□ 1.55
TMEM55A-204ENST00000520014 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
TMEM55A-204ENST00000520014 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
TMEM55A-204ENST00000520014 TDRD9Q8NDG6 1382 aaKnown RBP24.7■■□□□ 1.55
TMEM55A-204ENST00000520014 SNAPC4Q5SXM2 1469 aa24.69■■□□□ 1.54
TMEM55A-204ENST00000520014 SYNJ1O43426 1573 aa24.68■■□□□ 1.54
TMEM55A-204ENST00000520014 MAGI1Q96QZ7 1491 aaPredicted RBP24.68■■□□□ 1.54
TMEM55A-204ENST00000520014 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
TMEM55A-204ENST00000520014 GRIN2BQ13224 1484 aa24.64■■□□□ 1.54
TMEM55A-204ENST00000520014 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.53
TMEM55A-204ENST00000520014 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
TMEM55A-204ENST00000520014 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
TMEM55A-204ENST00000520014 WRNQ14191 1432 aaPredicted RBP eCLIP24.55■■□□□ 1.52
TMEM55A-204ENST00000520014 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
TMEM55A-204ENST00000520014 ADAMTS12P58397 1594 aa24.5■■□□□ 1.51
TMEM55A-204ENST00000520014 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
TMEM55A-204ENST00000520014 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
TMEM55A-204ENST00000520014 FBLN2P98095 1184 aa24.37■■□□□ 1.49
TMEM55A-204ENST00000520014 CEP170Q5SW79 1584 aa24.36■■□□□ 1.49
TMEM55A-204ENST00000520014 NUP160Q12769 1436 aa24.34■■□□□ 1.49
TMEM55A-204ENST00000520014 SHROOM2Q13796 1616 aa24.33■■□□□ 1.49
TMEM55A-204ENST00000520014 CHMP7Q8WUX9 453 aaPredicted RBP24.32■■□□□ 1.48
TMEM55A-204ENST00000520014 FHAD1B1AJZ9 1412 aa24.28■■□□□ 1.48
TMEM55A-204ENST00000520014 ERCC6L2Q5T890 1561 aa24.24■■□□□ 1.47
TMEM55A-204ENST00000520014 CYB5RLQ6IPT4 315 aa24.21■■□□□ 1.47
TMEM55A-204ENST00000520014 RUSC2Q8N2Y8 1516 aa24.18■■□□□ 1.46
TMEM55A-204ENST00000520014 CUL7Q14999 1698 aa24.15■■□□□ 1.46
TMEM55A-204ENST00000520014 KIF27Q86VH2 1401 aa24.02■■□□□ 1.44
TMEM55A-204ENST00000520014 IGF1RP08069 1367 aa24.02■■□□□ 1.44
TMEM55A-204ENST00000520014 KIAA0586Q9BVV6 1533 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms