RNA–Protein interactions for RNA: ENST00000520006.1

G3BP1-207, Transcript of G3BP stress granule assembly factor 1, humanhuman

TSL 5

Gene G3BP1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
G3BP1-207ENST00000520006 NISCHQ9Y2I1 1504 aa53.32■■■■■ 6.13
G3BP1-207ENST00000520006 CCDC180Q9P1Z9 1646 aa47.68■■■■■ 5.22
G3BP1-207ENST00000520006 ABCC9O60706 1549 aa47.2■■■■■ 5.15
G3BP1-207ENST00000520006 RB1CC1Q8TDY2 1594 aa45.22■■■■■ 4.83
G3BP1-207ENST00000520006 NACADO15069 1562 aa45.04■■■■■ 4.8
G3BP1-207ENST00000520006 DCAF8L2P0C7V8 631 aa44.76■■■■■ 4.76
G3BP1-207ENST00000520006 MYO15BQ96JP2 1530 aa44.64■■■■■ 4.74
G3BP1-207ENST00000520006 ZCCHC6Q5VYS8 1495 aaKnown RBP44.25■■■■■ 4.67
G3BP1-207ENST00000520006 DCAF1Q9Y4B6 1507 aa44.17■■■■■ 4.66
G3BP1-207ENST00000520006 UNC13AQ9UPW8 1703 aa44.06■■■■■ 4.64
G3BP1-207ENST00000520006 PABPN1Q86U42 306 aaKnown RBP eCLIP44.02■■■■■ 4.64
G3BP1-207ENST00000520006 DNAJC5BQ9UF47 199 aa43.96■■■■■ 4.63
G3BP1-207ENST00000520006 BICRAQ9NZM4 1560 aa43.81■■■■■ 4.6
G3BP1-207ENST00000520006 SHROOM4Q9ULL8 1493 aa43.46■■■■■ 4.55
G3BP1-207ENST00000520006 SCRIBQ14160 1630 aa43.33■■■■■ 4.53
G3BP1-207ENST00000520006 EIF4G1Q04637 1599 aaKnown RBP42.73■■■■■ 4.43
G3BP1-207ENST00000520006 CC2D2AQ9P2K1 1620 aa42.7■■■■■ 4.43
G3BP1-207ENST00000520006 CECR2Q9BXF3 1484 aa42.55■■■■■ 4.4
G3BP1-207ENST00000520006 NCAPD3P42695 1498 aa41.6■■■■■ 4.25
G3BP1-207ENST00000520006 SMARCA4P51532 1647 aa41.46■■■■■ 4.23
G3BP1-207ENST00000520006 ATAD2BQ9ULI0 1458 aa41.46■■■■■ 4.23
G3BP1-207ENST00000520006 SMARCA2P51531 1590 aa41.4■■■■■ 4.22
G3BP1-207ENST00000520006 BAZ1AQ9NRL2 1556 aaPredicted RBP41.38■■■■■ 4.22
G3BP1-207ENST00000520006 HMGXB3Q12766 1538 aa41.28■■■■■ 4.2
G3BP1-207ENST00000520006 PEG3Q9GZU2 1588 aa41.16■■■■■ 4.18
G3BP1-207ENST00000520006 BAZ1BQ9UIG0 1483 aaKnown RBP41.06■■■■■ 4.16
G3BP1-207ENST00000520006 MROH2BQ7Z745 1585 aa41.01■■■■■ 4.16
G3BP1-207ENST00000520006 ERCC6Q03468 1493 aa40.79■■■■■ 4.12
G3BP1-207ENST00000520006 CUX2O14529 1486 aa40.67■■■■■ 4.1
G3BP1-207ENST00000520006 NESP48681 1621 aa40.64■■■■■ 4.1
G3BP1-207ENST00000520006 LAMC3Q9Y6N6 1575 aa40.56■■■■■ 4.08
G3BP1-207ENST00000520006 WIZO95785 1651 aa40.5■■■■■ 4.07
G3BP1-207ENST00000520006 RSF1Q96T23 1441 aaPredicted RBP40.37■■■■■ 4.05
G3BP1-207ENST00000520006 PDS5BQ9NTI5 1447 aa40.35■■■■■ 4.05
G3BP1-207ENST00000520006 CADPSQ9ULU8 1353 aa40.33■■■■■ 4.05
G3BP1-207ENST00000520006 DNAJC5Q9H3Z4 198 aa40.23■■■■■ 4.03
G3BP1-207ENST00000520006 THOC2Q8NI27 1593 aaKnown RBP40.18■■■■■ 4.02
G3BP1-207ENST00000520006 KIF21AQ7Z4S6 1674 aa40.12■■■■■ 4.01
G3BP1-207ENST00000520006 TOP2AP11388 1531 aaKnown RBP40.1■■■■■ 4.01
G3BP1-207ENST00000520006 CFTRP13569 1480 aa39.94■■■■□ 3.98
G3BP1-207ENST00000520006 MRC2Q9UBG0 1479 aa39.9■■■■□ 3.98
G3BP1-207ENST00000520006 CEP164Q9UPV0 1460 aa39.82■■■■□ 3.97
G3BP1-207ENST00000520006 FANCD2Q9BXW9 1451 aa39.81■■■■□ 3.96
G3BP1-207ENST00000520006 WDR62O43379 1518 aa39.79■■■■□ 3.96
G3BP1-207ENST00000520006 CCDC88BA6NC98 1476 aa39.64■■■■□ 3.94
G3BP1-207ENST00000520006 PRDM2Q13029 1718 aa39.49■■■■□ 3.91
G3BP1-207ENST00000520006 URB2Q14146 1524 aaKnown RBP39.41■■■■□ 3.9
G3BP1-207ENST00000520006 ABCC8Q09428 1581 aa39.17■■■■□ 3.86
G3BP1-207ENST00000520006 TOPBP1Q92547 1522 aa39.09■■■■□ 3.85
G3BP1-207ENST00000520006 IFT140Q96RY7 1462 aa39.05■■■■□ 3.84
G3BP1-207ENST00000520006 DNMBPQ6XZF7 1577 aa38.99■■■■□ 3.83
G3BP1-207ENST00000520006 OSCARQ8IYS5 282 aa38.91■■■■□ 3.82
G3BP1-207ENST00000520006 ZNF608Q9ULD9 1512 aaPredicted RBP38.84■■■■□ 3.81
G3BP1-207ENST00000520006 SUPT5HO00267 1087 aaKnown RBP38.78■■■■□ 3.8
G3BP1-207ENST00000520006 POLA1P09884 1462 aaPredicted RBP38.71■■■■□ 3.79
G3BP1-207ENST00000520006 TARBP1Q13395 1621 aaKnown RBP38.71■■■■□ 3.79
G3BP1-207ENST00000520006 EIF4G3O43432 1585 aaKnown RBP38.64■■■■□ 3.78
G3BP1-207ENST00000520006 SOGA1O94964 1423 aa38.58■■■■□ 3.77
G3BP1-207ENST00000520006 AQRO60306 1485 aaKnown RBP eCLIP38.57■■■■□ 3.765e-8■■■■□ 26.3
G3BP1-207ENST00000520006 CUX1P39880 1505 aa38.52■■■■□ 3.76
G3BP1-207ENST00000520006 RAD54L2Q9Y4B4 1467 aa38.51■■■■□ 3.76
G3BP1-207ENST00000520006 FGD5Q6ZNL6 1462 aa38.5■■■■□ 3.75
G3BP1-207ENST00000520006 TRIM41Q8WV44 630 aa38.47■■■■□ 3.75
G3BP1-207ENST00000520006 WDR97A6NE52 1622 aa38.46■■■■□ 3.75
G3BP1-207ENST00000520006 TDRD9Q8NDG6 1382 aaKnown RBP38.4■■■■□ 3.74
G3BP1-207ENST00000520006 CHD1O14646 1710 aa38.26■■■■□ 3.71
G3BP1-207ENST00000520006 FBLN2P98095 1184 aa38.24■■■■□ 3.71
G3BP1-207ENST00000520006 GRIN2BQ13224 1484 aa38.21■■■■□ 3.71
G3BP1-207ENST00000520006 RIMBP3CA6NJZ7 1639 aa38.2■■■■□ 3.71
G3BP1-207ENST00000520006 RIMBP3BA6NNM3 1639 aa38.2■■■■□ 3.71
G3BP1-207ENST00000520006 RIMBP3Q9UFD9 1639 aa38.2■■■■□ 3.71
G3BP1-207ENST00000520006 MAGI1Q96QZ7 1491 aaPredicted RBP38.19■■■■□ 3.7
G3BP1-207ENST00000520006 SNAPC4Q5SXM2 1469 aa38.17■■■■□ 3.7
G3BP1-207ENST00000520006 ARHGEF11O15085 1522 aa38.17■■■■□ 3.7
G3BP1-207ENST00000520006 ABCA10Q8WWZ4 1543 aa38.16■■■■□ 3.7
G3BP1-207ENST00000520006 GAPVD1Q14C86 1478 aa38.11■■■■□ 3.69
G3BP1-207ENST00000520006 CHMP7Q8WUX9 453 aaPredicted RBP38.11■■■■□ 3.69
G3BP1-207ENST00000520006 WRNQ14191 1432 aaPredicted RBP eCLIP38.11■■■■□ 3.69
G3BP1-207ENST00000520006 TOP2BQ02880 1626 aa38.05■■■■□ 3.68
G3BP1-207ENST00000520006 SYNJ2O15056 1496 aa38.04■■■■□ 3.68
G3BP1-207ENST00000520006 BIVM-ERCC5R4GMW8 1640 aa38.03■■■■□ 3.68
G3BP1-207ENST00000520006 ABCA5Q8WWZ7 1642 aa37.99■■■■□ 3.67
G3BP1-207ENST00000520006 PBRM1Q86U86 1689 aa37.98■■■■□ 3.67
G3BP1-207ENST00000520006 SYNJ1O43426 1573 aa37.95■■■■□ 3.67
G3BP1-207ENST00000520006 CLASP1Q7Z460 1538 aa37.91■■■■□ 3.66
G3BP1-207ENST00000520006 CYB5RLQ6IPT4 315 aa37.88■■■■□ 3.65
G3BP1-207ENST00000520006 ARAP1Q96P48 1450 aa37.79■■■■□ 3.64
G3BP1-207ENST00000520006 ERICH3Q5RHP9 1530 aa37.71■■■■□ 3.63
G3BP1-207ENST00000520006 GRIN2AQ12879 1464 aa37.69■■■■□ 3.62
G3BP1-207ENST00000520006 FHAD1B1AJZ9 1412 aa37.68■■■■□ 3.62
G3BP1-207ENST00000520006 ADAMTS12P58397 1594 aa37.67■■■■□ 3.62
G3BP1-207ENST00000520006 NUP160Q12769 1436 aa37.58■■■■□ 3.61
G3BP1-207ENST00000520006 CEP170Q5SW79 1584 aa37.47■■■■□ 3.59
G3BP1-207ENST00000520006 KIF27Q86VH2 1401 aa37.37■■■■□ 3.57
G3BP1-207ENST00000520006 SHROOM2Q13796 1616 aa37.33■■■■□ 3.57
G3BP1-207ENST00000520006 TRHP20396 242 aaPredicted RBP37.32■■■■□ 3.56
G3BP1-207ENST00000520006 IGF1RP08069 1367 aa37.31■■■■□ 3.56
G3BP1-207ENST00000520006 ERCC6L2Q5T890 1561 aa37.24■■■■□ 3.55
G3BP1-207ENST00000520006 JPH4Q96JJ6 628 aa37.23■■■■□ 3.55
G3BP1-207ENST00000520006 CUL7Q14999 1698 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms