RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 NISCHQ9Y2I1 1504 aa39.89■■■■□ 3.98
CSGALNACT1-208ENST00000520003 ABCC9O60706 1549 aa36.13■■■■□ 3.38
CSGALNACT1-208ENST00000520003 CCDC180Q9P1Z9 1646 aa35.9■■■■□ 3.34
CSGALNACT1-208ENST00000520003 RB1CC1Q8TDY2 1594 aa34.29■■■■□ 3.08
CSGALNACT1-208ENST00000520003 DNAJC5BQ9UF47 199 aa34.22■■■■□ 3.07
CSGALNACT1-208ENST00000520003 NACADO15069 1562 aa34.02■■■■□ 3.04
CSGALNACT1-208ENST00000520003 DCAF8L2P0C7V8 631 aa33.63■■■□□ 2.97
CSGALNACT1-208ENST00000520003 PABPN1Q86U42 306 aaKnown RBP eCLIP33.59■■■□□ 2.97
CSGALNACT1-208ENST00000520003 MYO15BQ96JP2 1530 aa33.53■■■□□ 2.96
CSGALNACT1-208ENST00000520003 UNC13AQ9UPW8 1703 aa33.48■■■□□ 2.95
CSGALNACT1-208ENST00000520003 BICRAQ9NZM4 1560 aa33.36■■■□□ 2.93
CSGALNACT1-208ENST00000520003 ZCCHC6Q5VYS8 1495 aaKnown RBP33.02■■■□□ 2.88
CSGALNACT1-208ENST00000520003 DCAF1Q9Y4B6 1507 aa32.98■■■□□ 2.87
CSGALNACT1-208ENST00000520003 SHROOM4Q9ULL8 1493 aa32.91■■■□□ 2.86
CSGALNACT1-208ENST00000520003 CC2D2AQ9P2K1 1620 aa32.64■■■□□ 2.82
CSGALNACT1-208ENST00000520003 SCRIBQ14160 1630 aa32.63■■■□□ 2.81
CSGALNACT1-208ENST00000520003 CECR2Q9BXF3 1484 aa32.61■■■□□ 2.81
CSGALNACT1-208ENST00000520003 EIF4G1Q04637 1599 aaKnown RBP32.53■■■□□ 2.8
CSGALNACT1-208ENST00000520003 DNAJC5Q9H3Z4 198 aa31.62■■■□□ 2.65
CSGALNACT1-208ENST00000520003 NCAPD3P42695 1498 aa31.46■■■□□ 2.63
CSGALNACT1-208ENST00000520003 CUX2O14529 1486 aa31.31■■■□□ 2.6
CSGALNACT1-208ENST00000520003 ATAD2BQ9ULI0 1458 aa31.29■■■□□ 2.6
CSGALNACT1-208ENST00000520003 ERCC6Q03468 1493 aa31.19■■■□□ 2.58
CSGALNACT1-208ENST00000520003 HMGXB3Q12766 1538 aa31.17■■■□□ 2.58
CSGALNACT1-208ENST00000520003 SMARCA2P51531 1590 aa31.16■■■□□ 2.58
CSGALNACT1-208ENST00000520003 SMARCA4P51532 1647 aa31.15■■■□□ 2.58
CSGALNACT1-208ENST00000520003 NESP48681 1621 aa30.98■■■□□ 2.55
CSGALNACT1-208ENST00000520003 BAZ1AQ9NRL2 1556 aaPredicted RBP30.96■■■□□ 2.55
CSGALNACT1-208ENST00000520003 BAZ1BQ9UIG0 1483 aaKnown RBP30.92■■■□□ 2.54
CSGALNACT1-208ENST00000520003 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
CSGALNACT1-208ENST00000520003 THOC2Q8NI27 1593 aaKnown RBP30.75■■■□□ 2.51
CSGALNACT1-208ENST00000520003 LAMC3Q9Y6N6 1575 aa30.74■■■□□ 2.51
CSGALNACT1-208ENST00000520003 MROH2BQ7Z745 1585 aa30.72■■■□□ 2.51
CSGALNACT1-208ENST00000520003 PDS5BQ9NTI5 1447 aa30.56■■■□□ 2.48
CSGALNACT1-208ENST00000520003 KIF21AQ7Z4S6 1674 aa30.53■■■□□ 2.48
CSGALNACT1-208ENST00000520003 CADPSQ9ULU8 1353 aa30.45■■■□□ 2.47
CSGALNACT1-208ENST00000520003 MRC2Q9UBG0 1479 aa30.31■■■□□ 2.44
CSGALNACT1-208ENST00000520003 WIZO95785 1651 aa30.3■■■□□ 2.44
CSGALNACT1-208ENST00000520003 WDR62O43379 1518 aa30.27■■■□□ 2.44
CSGALNACT1-208ENST00000520003 CEP164Q9UPV0 1460 aa30.12■■■□□ 2.41
CSGALNACT1-208ENST00000520003 FANCD2Q9BXW9 1451 aa30.08■■■□□ 2.41
CSGALNACT1-208ENST00000520003 CFTRP13569 1480 aa30.06■■■□□ 2.4
CSGALNACT1-208ENST00000520003 RSF1Q96T23 1441 aaPredicted RBP30■■■□□ 2.39
CSGALNACT1-208ENST00000520003 TRIM41Q8WV44 630 aa30■■■□□ 2.39
CSGALNACT1-208ENST00000520003 TOP2AP11388 1531 aaKnown RBP29.93■■■□□ 2.38
CSGALNACT1-208ENST00000520003 URB2Q14146 1524 aaKnown RBP29.87■■■□□ 2.37
CSGALNACT1-208ENST00000520003 OSCARQ8IYS5 282 aa29.79■■■□□ 2.36
CSGALNACT1-208ENST00000520003 PRDM2Q13029 1718 aa29.64■■■□□ 2.34
CSGALNACT1-208ENST00000520003 CCDC88BA6NC98 1476 aa29.6■■■□□ 2.33
CSGALNACT1-208ENST00000520003 IFT140Q96RY7 1462 aa29.55■■■□□ 2.32
CSGALNACT1-208ENST00000520003 ZNF608Q9ULD9 1512 aaPredicted RBP29.53■■■□□ 2.32
CSGALNACT1-208ENST00000520003 TOPBP1Q92547 1522 aa29.49■■■□□ 2.31
CSGALNACT1-208ENST00000520003 RIMBP3CA6NJZ7 1639 aa29.43■■■□□ 2.3
CSGALNACT1-208ENST00000520003 RIMBP3BA6NNM3 1639 aa29.43■■■□□ 2.3
CSGALNACT1-208ENST00000520003 RIMBP3Q9UFD9 1639 aa29.43■■■□□ 2.3
CSGALNACT1-208ENST00000520003 ABCC8Q09428 1581 aa29.4■■■□□ 2.3
CSGALNACT1-208ENST00000520003 DNMBPQ6XZF7 1577 aa29.35■■■□□ 2.29
CSGALNACT1-208ENST00000520003 ARHGEF11O15085 1522 aa29.34■■■□□ 2.29
CSGALNACT1-208ENST00000520003 EIF4G3O43432 1585 aaKnown RBP29.34■■■□□ 2.29
CSGALNACT1-208ENST00000520003 TARBP1Q13395 1621 aaKnown RBP29.26■■■□□ 2.27
CSGALNACT1-208ENST00000520003 AQRO60306 1485 aaKnown RBP eCLIP29.22■■■□□ 2.27
CSGALNACT1-208ENST00000520003 POLA1P09884 1462 aaPredicted RBP29.18■■■□□ 2.26
CSGALNACT1-208ENST00000520003 CHD1O14646 1710 aa29.12■■■□□ 2.25
CSGALNACT1-208ENST00000520003 CYB5RLQ6IPT4 315 aa29.09■■■□□ 2.25
CSGALNACT1-208ENST00000520003 ARAP1Q96P48 1450 aa29.05■■■□□ 2.24
CSGALNACT1-208ENST00000520003 RAD54L2Q9Y4B4 1467 aa29.04■■■□□ 2.24
CSGALNACT1-208ENST00000520003 SOGA1O94964 1423 aa29.02■■■□□ 2.24
CSGALNACT1-208ENST00000520003 TDRD9Q8NDG6 1382 aaKnown RBP29■■■□□ 2.23
CSGALNACT1-208ENST00000520003 FBLN2P98095 1184 aa28.99■■■□□ 2.23
CSGALNACT1-208ENST00000520003 WDR97A6NE52 1622 aa28.94■■■□□ 2.22
CSGALNACT1-208ENST00000520003 FGD5Q6ZNL6 1462 aa28.93■■■□□ 2.22
CSGALNACT1-208ENST00000520003 SNAPC4Q5SXM2 1469 aa28.91■■■□□ 2.22
CSGALNACT1-208ENST00000520003 CUX1P39880 1505 aa28.89■■■□□ 2.21
CSGALNACT1-208ENST00000520003 CLASP1Q7Z460 1538 aa28.88■■■□□ 2.21
CSGALNACT1-208ENST00000520003 MAGI1Q96QZ7 1491 aaPredicted RBP28.85■■■□□ 2.21
CSGALNACT1-208ENST00000520003 GRIN2BQ13224 1484 aa28.81■■■□□ 2.2
CSGALNACT1-208ENST00000520003 TRHP20396 242 aaPredicted RBP28.81■■■□□ 2.2
CSGALNACT1-208ENST00000520003 CHMP7Q8WUX9 453 aaPredicted RBP28.78■■■□□ 2.2
CSGALNACT1-208ENST00000520003 SYNJ1O43426 1573 aa28.77■■■□□ 2.2
CSGALNACT1-208ENST00000520003 SYNJ2O15056 1496 aa28.75■■■□□ 2.19
CSGALNACT1-208ENST00000520003 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
CSGALNACT1-208ENST00000520003 ABCA10Q8WWZ4 1543 aa28.62■■■□□ 2.17
CSGALNACT1-208ENST00000520003 PBRM1Q86U86 1689 aa28.61■■■□□ 2.17
CSGALNACT1-208ENST00000520003 ABCA5Q8WWZ7 1642 aa28.59■■■□□ 2.17
CSGALNACT1-208ENST00000520003 GRIN2AQ12879 1464 aa28.45■■■□□ 2.14
CSGALNACT1-208ENST00000520003 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
CSGALNACT1-208ENST00000520003 NUP160Q12769 1436 aa28.4■■■□□ 2.14
CSGALNACT1-208ENST00000520003 ERCC6L2Q5T890 1561 aa28.38■■■□□ 2.13
CSGALNACT1-208ENST00000520003 ADAMTS12P58397 1594 aa28.37■■■□□ 2.13
CSGALNACT1-208ENST00000520003 CEP170Q5SW79 1584 aa28.35■■■□□ 2.13
CSGALNACT1-208ENST00000520003 TOP2BQ02880 1626 aa28.33■■■□□ 2.13
CSGALNACT1-208ENST00000520003 BIVM-ERCC5R4GMW8 1640 aa28.33■■■□□ 2.13
CSGALNACT1-208ENST00000520003 SUPT5HO00267 1087 aaKnown RBP28.33■■■□□ 2.13
CSGALNACT1-208ENST00000520003 FHAD1B1AJZ9 1412 aa28.3■■■□□ 2.12
CSGALNACT1-208ENST00000520003 SHROOM2Q13796 1616 aa28.28■■■□□ 2.12
CSGALNACT1-208ENST00000520003 ERICH3Q5RHP9 1530 aa28.24■■■□□ 2.11
CSGALNACT1-208ENST00000520003 AEBP2Q6ZN18 517 aaPredicted RBP28.15■■■□□ 2.1
CSGALNACT1-208ENST00000520003 PRG4Q92954 1404 aaPredicted RBP28.09■■■□□ 2.09
CSGALNACT1-208ENST00000520003 JPH4Q96JJ6 628 aa28.05■■■□□ 2.08
CSGALNACT1-208ENST00000520003 RUSC2Q8N2Y8 1516 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms