RNA–Protein interactions for RNA: ENST00000519952.5

R3HCC1-205, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-205ENST00000519952 NISCHQ9Y2I1 1504 aa28.13■■■□□ 2.09
R3HCC1-205ENST00000519952 ABCC9O60706 1549 aa26.97■■□□□ 1.91
R3HCC1-205ENST00000519952 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
R3HCC1-205ENST00000519952 CCDC180Q9P1Z9 1646 aa25.72■■□□□ 1.71
R3HCC1-205ENST00000519952 RB1CC1Q8TDY2 1594 aa25.09■■□□□ 1.61
R3HCC1-205ENST00000519952 DNAJC5Q9H3Z4 198 aa25.05■■□□□ 1.6
R3HCC1-205ENST00000519952 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.59
R3HCC1-205ENST00000519952 NACADO15069 1562 aa24.6■■□□□ 1.53
R3HCC1-205ENST00000519952 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
R3HCC1-205ENST00000519952 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
R3HCC1-205ENST00000519952 CECR2Q9BXF3 1484 aa24.4■■□□□ 1.5
R3HCC1-205ENST00000519952 BICRAQ9NZM4 1560 aa24.4■■□□□ 1.5
R3HCC1-205ENST00000519952 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
R3HCC1-205ENST00000519952 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
R3HCC1-205ENST00000519952 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
R3HCC1-205ENST00000519952 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
R3HCC1-205ENST00000519952 CUX2O14529 1486 aa23.68■■□□□ 1.38
R3HCC1-205ENST00000519952 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
R3HCC1-205ENST00000519952 SCRIBQ14160 1630 aa23.46■■□□□ 1.35
R3HCC1-205ENST00000519952 ZCCHC6Q5VYS8 1495 aaKnown RBP23.46■■□□□ 1.35
R3HCC1-205ENST00000519952 ERCC6Q03468 1493 aa23.39■■□□□ 1.34
R3HCC1-205ENST00000519952 DCAF1Q9Y4B6 1507 aa23.34■■□□□ 1.33
R3HCC1-205ENST00000519952 NESP48681 1621 aa22.83■■□□□ 1.25
R3HCC1-205ENST00000519952 THOC2Q8NI27 1593 aaKnown RBP22.79■■□□□ 1.24
R3HCC1-205ENST00000519952 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
R3HCC1-205ENST00000519952 SMARCA2P51531 1590 aa22.62■■□□□ 1.21
R3HCC1-205ENST00000519952 ATAD2BQ9ULI0 1458 aa22.52■■□□□ 1.2
R3HCC1-205ENST00000519952 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
R3HCC1-205ENST00000519952 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
R3HCC1-205ENST00000519952 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
R3HCC1-205ENST00000519952 OSCARQ8IYS5 282 aa22.45■■□□□ 1.18
R3HCC1-205ENST00000519952 HMGXB3Q12766 1538 aa22.44■■□□□ 1.18
R3HCC1-205ENST00000519952 LAMC3Q9Y6N6 1575 aa22.42■■□□□ 1.18
R3HCC1-205ENST00000519952 PDS5BQ9NTI5 1447 aa22.35■■□□□ 1.17
R3HCC1-205ENST00000519952 RIMBP3CA6NJZ7 1639 aa22.29■■□□□ 1.16
R3HCC1-205ENST00000519952 RIMBP3BA6NNM3 1639 aa22.29■■□□□ 1.16
R3HCC1-205ENST00000519952 RIMBP3Q9UFD9 1639 aa22.29■■□□□ 1.16
R3HCC1-205ENST00000519952 BAZ1BQ9UIG0 1483 aaKnown RBP22.26■■□□□ 1.15
R3HCC1-205ENST00000519952 TRHP20396 242 aaPredicted RBP22.23■■□□□ 1.15
R3HCC1-205ENST00000519952 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
R3HCC1-205ENST00000519952 WDR62O43379 1518 aa22.2■■□□□ 1.14
R3HCC1-205ENST00000519952 SMARCA4P51532 1647 aa22.2■■□□□ 1.14
R3HCC1-205ENST00000519952 ARHGEF11O15085 1522 aa22.07■■□□□ 1.12
R3HCC1-205ENST00000519952 CYB5RLQ6IPT4 315 aa22.05■■□□□ 1.12
R3HCC1-205ENST00000519952 CADPSQ9ULU8 1353 aa22■■□□□ 1.11
R3HCC1-205ENST00000519952 PEG3Q9GZU2 1588 aa21.93■■□□□ 1.1
R3HCC1-205ENST00000519952 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
R3HCC1-205ENST00000519952 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
R3HCC1-205ENST00000519952 ARAP1Q96P48 1450 aa21.77■■□□□ 1.08
R3HCC1-205ENST00000519952 SUPT5HO00267 1087 aaKnown RBP21.68■■□□□ 1.06
R3HCC1-205ENST00000519952 ILDR1Q86SU0 546 aaPredicted RBP21.68■■□□□ 1.06
R3HCC1-205ENST00000519952 MROH2BQ7Z745 1585 aa21.67■■□□□ 1.06
R3HCC1-205ENST00000519952 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
R3HCC1-205ENST00000519952 ZNF608Q9ULD9 1512 aaPredicted RBP21.62■■□□□ 1.05
R3HCC1-205ENST00000519952 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
R3HCC1-205ENST00000519952 CHD1O14646 1710 aa21.52■■□□□ 1.04
R3HCC1-205ENST00000519952 IFT140Q96RY7 1462 aa21.51■■□□□ 1.03
R3HCC1-205ENST00000519952 CFTRP13569 1480 aa21.49■■□□□ 1.03
R3HCC1-205ENST00000519952 FBLN2P98095 1184 aa21.46■■□□□ 1.03
R3HCC1-205ENST00000519952 EIF4G3O43432 1585 aaKnown RBP21.43■■□□□ 1.02
R3HCC1-205ENST00000519952 WIZO95785 1651 aa21.42■■□□□ 1.02
R3HCC1-205ENST00000519952 AQRO60306 1485 aaKnown RBP eCLIP21.29■■□□□ 1
R3HCC1-205ENST00000519952 TOP2AP11388 1531 aaKnown RBP21.23■□□□□ 0.99
R3HCC1-205ENST00000519952 TOPBP1Q92547 1522 aa21.23■□□□□ 0.99
R3HCC1-205ENST00000519952 PRDM2Q13029 1718 aa21.2■□□□□ 0.98
R3HCC1-205ENST00000519952 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
R3HCC1-205ENST00000519952 TARBP1Q13395 1621 aaKnown RBP21.11■□□□□ 0.97
R3HCC1-205ENST00000519952 GAPVD1Q14C86 1478 aa21.1■□□□□ 0.97
R3HCC1-205ENST00000519952 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
R3HCC1-205ENST00000519952 KDM4FA0A1W2PPD8 638 aa21.07■□□□□ 0.96
R3HCC1-205ENST00000519952 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
R3HCC1-205ENST00000519952 CHMP7Q8WUX9 453 aaPredicted RBP21.06■□□□□ 0.96
R3HCC1-205ENST00000519952 DNMBPQ6XZF7 1577 aa21.03■□□□□ 0.96
R3HCC1-205ENST00000519952 SNAPC4Q5SXM2 1469 aa21.02■□□□□ 0.96
R3HCC1-205ENST00000519952 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
R3HCC1-205ENST00000519952 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
R3HCC1-205ENST00000519952 KIF13AQ9H1H9 1805 aa20.96■□□□□ 0.95
R3HCC1-205ENST00000519952 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
R3HCC1-205ENST00000519952 RAD54L2Q9Y4B4 1467 aa20.92■□□□□ 0.94
R3HCC1-205ENST00000519952 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
R3HCC1-205ENST00000519952 SYNJ2O15056 1496 aa20.84■□□□□ 0.93
R3HCC1-205ENST00000519952 SOGA1O94964 1423 aa20.84■□□□□ 0.93
R3HCC1-205ENST00000519952 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.92
R3HCC1-205ENST00000519952 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
R3HCC1-205ENST00000519952 WDR97A6NE52 1622 aa20.77■□□□□ 0.92
R3HCC1-205ENST00000519952 FAM69CQ0P6D2 419 aa20.76■□□□□ 0.91
R3HCC1-205ENST00000519952 KDM6BO15054 1643 aa20.73■□□□□ 0.91
R3HCC1-205ENST00000519952 HECW2Q9P2P5 1572 aa20.71■□□□□ 0.91
R3HCC1-205ENST00000519952 FBXO41Q8TF61 875 aa20.7■□□□□ 0.9
R3HCC1-205ENST00000519952 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
R3HCC1-205ENST00000519952 ABCC10Q5T3U5 1492 aa20.65■□□□□ 0.9
R3HCC1-205ENST00000519952 CEP170Q5SW79 1584 aa20.64■□□□□ 0.9
R3HCC1-205ENST00000519952 FGD5Q6ZNL6 1462 aa20.64■□□□□ 0.89
R3HCC1-205ENST00000519952 PBRM1Q86U86 1689 aa20.64■□□□□ 0.89
R3HCC1-205ENST00000519952 ADGRL1O94910 1474 aa20.61■□□□□ 0.89
R3HCC1-205ENST00000519952 TSPOAP1O95153 1857 aa20.6■□□□□ 0.89
R3HCC1-205ENST00000519952 DIP2BQ9P265 1576 aa20.57■□□□□ 0.88
R3HCC1-205ENST00000519952 LMTK3Q96Q04 1460 aa20.56■□□□□ 0.88
R3HCC1-205ENST00000519952 NPM1P06748 294 aaKnown RBP eCLIP20.53■□□□□ 0.88
R3HCC1-205ENST00000519952 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms