RNA–Protein interactions for RNA: ENST00000519886.5

EXTL3-206, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 3

Gene EXTL3, Length 803 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-206ENST00000519886 NISCHQ9Y2I1 1504 aa25.23■■□□□ 1.63
EXTL3-206ENST00000519886 ABCC9O60706 1549 aa23.79■■□□□ 1.4
EXTL3-206ENST00000519886 DNAJC5BQ9UF47 199 aa23.11■■□□□ 1.29
EXTL3-206ENST00000519886 CCDC180Q9P1Z9 1646 aa22.87■■□□□ 1.25
EXTL3-206ENST00000519886 RB1CC1Q8TDY2 1594 aa22.18■■□□□ 1.14
EXTL3-206ENST00000519886 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.12
EXTL3-206ENST00000519886 NACADO15069 1562 aa21.84■■□□□ 1.09
EXTL3-206ENST00000519886 UNC13AQ9UPW8 1703 aa21.71■■□□□ 1.07
EXTL3-206ENST00000519886 DCAF8L2P0C7V8 631 aa21.68■■□□□ 1.06
EXTL3-206ENST00000519886 BICRAQ9NZM4 1560 aa21.67■■□□□ 1.06
EXTL3-206ENST00000519886 DNAJC5Q9H3Z4 198 aa21.66■■□□□ 1.06
EXTL3-206ENST00000519886 CECR2Q9BXF3 1484 aa21.47■■□□□ 1.03
EXTL3-206ENST00000519886 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
EXTL3-206ENST00000519886 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
EXTL3-206ENST00000519886 EIF4G1Q04637 1599 aaKnown RBP21.16■□□□□ 0.98
EXTL3-206ENST00000519886 SHROOM4Q9ULL8 1493 aa21.13■□□□□ 0.97
EXTL3-206ENST00000519886 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
EXTL3-206ENST00000519886 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
EXTL3-206ENST00000519886 DCAF1Q9Y4B6 1507 aa20.73■□□□□ 0.91
EXTL3-206ENST00000519886 CUX2O14529 1486 aa20.72■□□□□ 0.91
EXTL3-206ENST00000519886 ERCC6Q03468 1493 aa20.52■□□□□ 0.88
EXTL3-206ENST00000519886 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
EXTL3-206ENST00000519886 NESP48681 1621 aa20.24■□□□□ 0.83
EXTL3-206ENST00000519886 NCAPD3P42695 1498 aa20.23■□□□□ 0.83
EXTL3-206ENST00000519886 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
EXTL3-206ENST00000519886 ATAD2BQ9ULI0 1458 aa20.09■□□□□ 0.81
EXTL3-206ENST00000519886 SMARCA2P51531 1590 aa19.97■□□□□ 0.79
EXTL3-206ENST00000519886 HMGXB3Q12766 1538 aa19.97■□□□□ 0.79
EXTL3-206ENST00000519886 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
EXTL3-206ENST00000519886 LAMC3Q9Y6N6 1575 aa19.84■□□□□ 0.77
EXTL3-206ENST00000519886 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
EXTL3-206ENST00000519886 BAZ1BQ9UIG0 1483 aaKnown RBP19.81■□□□□ 0.76
EXTL3-206ENST00000519886 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
EXTL3-206ENST00000519886 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
EXTL3-206ENST00000519886 OSCARQ8IYS5 282 aa19.68■□□□□ 0.74
EXTL3-206ENST00000519886 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
EXTL3-206ENST00000519886 WDR62O43379 1518 aa19.66■□□□□ 0.74
EXTL3-206ENST00000519886 PEG3Q9GZU2 1588 aa19.62■□□□□ 0.73
EXTL3-206ENST00000519886 CADPSQ9ULU8 1353 aa19.58■□□□□ 0.73
EXTL3-206ENST00000519886 RIMBP3CA6NJZ7 1639 aa19.52■□□□□ 0.72
EXTL3-206ENST00000519886 RIMBP3BA6NNM3 1639 aa19.52■□□□□ 0.72
EXTL3-206ENST00000519886 RIMBP3Q9UFD9 1639 aa19.52■□□□□ 0.72
EXTL3-206ENST00000519886 MROH2BQ7Z745 1585 aa19.49■□□□□ 0.71
EXTL3-206ENST00000519886 CEP164Q9UPV0 1460 aa19.43■□□□□ 0.7
EXTL3-206ENST00000519886 ARHGEF11O15085 1522 aa19.4■□□□□ 0.7
EXTL3-206ENST00000519886 FANCD2Q9BXW9 1451 aa19.37■□□□□ 0.69
EXTL3-206ENST00000519886 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.68
EXTL3-206ENST00000519886 CYB5RLQ6IPT4 315 aa19.33■□□□□ 0.68
EXTL3-206ENST00000519886 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
EXTL3-206ENST00000519886 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
EXTL3-206ENST00000519886 ZNF608Q9ULD9 1512 aaPredicted RBP19.21■□□□□ 0.67
EXTL3-206ENST00000519886 CFTRP13569 1480 aa19.2■□□□□ 0.66
EXTL3-206ENST00000519886 WIZO95785 1651 aa19.19■□□□□ 0.66
EXTL3-206ENST00000519886 ARAP1Q96P48 1450 aa19.18■□□□□ 0.66
EXTL3-206ENST00000519886 IFT140Q96RY7 1462 aa19.07■□□□□ 0.64
EXTL3-206ENST00000519886 EIF4G3O43432 1585 aaKnown RBP18.99■□□□□ 0.63
EXTL3-206ENST00000519886 CHD1O14646 1710 aa18.97■□□□□ 0.63
EXTL3-206ENST00000519886 RSF1Q96T23 1441 aaPredicted RBP18.96■□□□□ 0.63
EXTL3-206ENST00000519886 AQRO60306 1485 aaKnown RBP eCLIP18.93■□□□□ 0.62
EXTL3-206ENST00000519886 FBLN2P98095 1184 aa18.93■□□□□ 0.62
EXTL3-206ENST00000519886 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
EXTL3-206ENST00000519886 TOP2AP11388 1531 aaKnown RBP18.85■□□□□ 0.61
EXTL3-206ENST00000519886 PRDM2Q13029 1718 aa18.82■□□□□ 0.6
EXTL3-206ENST00000519886 TARBP1Q13395 1621 aaKnown RBP18.8■□□□□ 0.6
EXTL3-206ENST00000519886 CLASP1Q7Z460 1538 aa18.77■□□□□ 0.6
EXTL3-206ENST00000519886 DNMBPQ6XZF7 1577 aa18.74■□□□□ 0.59
EXTL3-206ENST00000519886 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
EXTL3-206ENST00000519886 CCDC88BA6NC98 1476 aa18.7■□□□□ 0.58
EXTL3-206ENST00000519886 POLA1P09884 1462 aaPredicted RBP18.69■□□□□ 0.58
EXTL3-206ENST00000519886 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
EXTL3-206ENST00000519886 SNAPC4Q5SXM2 1469 aa18.68■□□□□ 0.58
EXTL3-206ENST00000519886 RAD54L2Q9Y4B4 1467 aa18.68■□□□□ 0.58
EXTL3-206ENST00000519886 ILDR1Q86SU0 546 aaPredicted RBP18.67■□□□□ 0.58
EXTL3-206ENST00000519886 GAPVD1Q14C86 1478 aa18.64■□□□□ 0.57
EXTL3-206ENST00000519886 CHMP7Q8WUX9 453 aaPredicted RBP18.63■□□□□ 0.57
EXTL3-206ENST00000519886 SYNJ1O43426 1573 aa18.63■□□□□ 0.57
EXTL3-206ENST00000519886 SOGA1O94964 1423 aa18.57■□□□□ 0.56
EXTL3-206ENST00000519886 MAGI1Q96QZ7 1491 aaPredicted RBP18.53■□□□□ 0.56
EXTL3-206ENST00000519886 SYNJ2O15056 1496 aa18.51■□□□□ 0.55
EXTL3-206ENST00000519886 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
EXTL3-206ENST00000519886 GRIN2BQ13224 1484 aa18.47■□□□□ 0.55
EXTL3-206ENST00000519886 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
EXTL3-206ENST00000519886 KDM4FA0A1W2PPD8 638 aa18.45■□□□□ 0.54
EXTL3-206ENST00000519886 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
EXTL3-206ENST00000519886 KIF13AQ9H1H9 1805 aa18.39■□□□□ 0.54
EXTL3-206ENST00000519886 CUX1P39880 1505 aa18.33■□□□□ 0.53
EXTL3-206ENST00000519886 PBRM1Q86U86 1689 aa18.32■□□□□ 0.52
EXTL3-206ENST00000519886 CEP170Q5SW79 1584 aa18.32■□□□□ 0.52
EXTL3-206ENST00000519886 FAM69CQ0P6D2 419 aa18.27■□□□□ 0.52
EXTL3-206ENST00000519886 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
EXTL3-206ENST00000519886 NUP160Q12769 1436 aa18.24■□□□□ 0.51
EXTL3-206ENST00000519886 ABCC10Q5T3U5 1492 aa18.22■□□□□ 0.51
EXTL3-206ENST00000519886 ABCA5Q8WWZ7 1642 aa18.22■□□□□ 0.51
EXTL3-206ENST00000519886 SHROOM2Q13796 1616 aa18.21■□□□□ 0.51
EXTL3-206ENST00000519886 ABCA10Q8WWZ4 1543 aa18.18■□□□□ 0.5
EXTL3-206ENST00000519886 KDM6BO15054 1643 aa18.17■□□□□ 0.5
EXTL3-206ENST00000519886 DIP2BQ9P265 1576 aa18.15■□□□□ 0.5
EXTL3-206ENST00000519886 ADAMTS12P58397 1594 aa18.14■□□□□ 0.49
EXTL3-206ENST00000519886 PRG4Q92954 1404 aaPredicted RBP18.13■□□□□ 0.49
EXTL3-206ENST00000519886 MAPKBP1O60336 1514 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms