RNA–Protein interactions for RNA: ENST00000519817.5

SNX16-207, Transcript of sorting nexin 16, humanhuman

TSL 3

Gene SNX16, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16-207ENST00000519817 NISCHQ9Y2I1 1504 aa36.63■■■■□ 3.45
SNX16-207ENST00000519817 CCDC180Q9P1Z9 1646 aa32.4■■■□□ 2.78
SNX16-207ENST00000519817 ABCC9O60706 1549 aa32■■■□□ 2.71
SNX16-207ENST00000519817 DCAF8L2P0C7V8 631 aa30.81■■■□□ 2.52
SNX16-207ENST00000519817 RB1CC1Q8TDY2 1594 aa30.59■■■□□ 2.49
SNX16-207ENST00000519817 NACADO15069 1562 aa30.54■■■□□ 2.48
SNX16-207ENST00000519817 ZCCHC6Q5VYS8 1495 aaKnown RBP30.5■■■□□ 2.47
SNX16-207ENST00000519817 MYO15BQ96JP2 1530 aa30.31■■■□□ 2.44
SNX16-207ENST00000519817 DCAF1Q9Y4B6 1507 aa30.2■■■□□ 2.42
SNX16-207ENST00000519817 PABPN1Q86U42 306 aaKnown RBP eCLIP30■■■□□ 2.39
SNX16-207ENST00000519817 UNC13AQ9UPW8 1703 aa29.87■■■□□ 2.37
SNX16-207ENST00000519817 SCRIBQ14160 1630 aa29.76■■■□□ 2.35
SNX16-207ENST00000519817 BICRAQ9NZM4 1560 aa29.76■■■□□ 2.35
SNX16-207ENST00000519817 DNAJC5BQ9UF47 199 aa29.52■■■□□ 2.32
SNX16-207ENST00000519817 SHROOM4Q9ULL8 1493 aa29.26■■■□□ 2.27
SNX16-207ENST00000519817 EIF4G1Q04637 1599 aaKnown RBP28.95■■■□□ 2.22
SNX16-207ENST00000519817 CC2D2AQ9P2K1 1620 aa28.84■■■□□ 2.21
SNX16-207ENST00000519817 CECR2Q9BXF3 1484 aa28.71■■■□□ 2.19
SNX16-207ENST00000519817 SMARCA4P51532 1647 aa28.4■■■□□ 2.14
SNX16-207ENST00000519817 BAZ1AQ9NRL2 1556 aaPredicted RBP28.33■■■□□ 2.13
SNX16-207ENST00000519817 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
SNX16-207ENST00000519817 MROH2BQ7Z745 1585 aa28.29■■■□□ 2.12
SNX16-207ENST00000519817 NCAPD3P42695 1498 aa28.26■■■□□ 2.11
SNX16-207ENST00000519817 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
SNX16-207ENST00000519817 PEG3Q9GZU2 1588 aa28.06■■■□□ 2.08
SNX16-207ENST00000519817 HMGXB3Q12766 1538 aa28.04■■■□□ 2.08
SNX16-207ENST00000519817 BAZ1BQ9UIG0 1483 aaKnown RBP28.04■■■□□ 2.08
SNX16-207ENST00000519817 RSF1Q96T23 1441 aaPredicted RBP27.97■■■□□ 2.07
SNX16-207ENST00000519817 WIZO95785 1651 aa27.95■■■□□ 2.07
SNX16-207ENST00000519817 NESP48681 1621 aa27.7■■■□□ 2.03
SNX16-207ENST00000519817 TOP2AP11388 1531 aaKnown RBP27.6■■■□□ 2.01
SNX16-207ENST00000519817 ERCC6Q03468 1493 aa27.51■■■□□ 2
SNX16-207ENST00000519817 CADPSQ9ULU8 1353 aa27.48■■□□□ 1.99
SNX16-207ENST00000519817 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
SNX16-207ENST00000519817 CCDC88BA6NC98 1476 aa27.37■■□□□ 1.97
SNX16-207ENST00000519817 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
SNX16-207ENST00000519817 PDS5BQ9NTI5 1447 aa27.32■■□□□ 1.96
SNX16-207ENST00000519817 CFTRP13569 1480 aa27.27■■□□□ 1.96
SNX16-207ENST00000519817 KIF21AQ7Z4S6 1674 aa27.22■■□□□ 1.95
SNX16-207ENST00000519817 THOC2Q8NI27 1593 aaKnown RBP27.15■■□□□ 1.94
SNX16-207ENST00000519817 CUX2O14529 1486 aa27.15■■□□□ 1.94
SNX16-207ENST00000519817 FANCD2Q9BXW9 1451 aa27.15■■□□□ 1.94
SNX16-207ENST00000519817 CEP164Q9UPV0 1460 aa27.08■■□□□ 1.93
SNX16-207ENST00000519817 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
SNX16-207ENST00000519817 WDR62O43379 1518 aa26.94■■□□□ 1.9
SNX16-207ENST00000519817 URB2Q14146 1524 aaKnown RBP26.9■■□□□ 1.9
SNX16-207ENST00000519817 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
SNX16-207ENST00000519817 TOPBP1Q92547 1522 aa26.7■■□□□ 1.87
SNX16-207ENST00000519817 DNMBPQ6XZF7 1577 aa26.62■■□□□ 1.85
SNX16-207ENST00000519817 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
SNX16-207ENST00000519817 CUX1P39880 1505 aa26.52■■□□□ 1.84
SNX16-207ENST00000519817 IFT140Q96RY7 1462 aa26.51■■□□□ 1.83
SNX16-207ENST00000519817 ZNF608Q9ULD9 1512 aaPredicted RBP26.5■■□□□ 1.83
SNX16-207ENST00000519817 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
SNX16-207ENST00000519817 DNAJC5Q9H3Z4 198 aa26.48■■□□□ 1.83
SNX16-207ENST00000519817 RAD54L2Q9Y4B4 1467 aa26.46■■□□□ 1.83
SNX16-207ENST00000519817 FGD5Q6ZNL6 1462 aa26.43■■□□□ 1.82
SNX16-207ENST00000519817 SOGA1O94964 1423 aa26.4■■□□□ 1.82
SNX16-207ENST00000519817 TARBP1Q13395 1621 aaKnown RBP26.38■■□□□ 1.81
SNX16-207ENST00000519817 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.81
SNX16-207ENST00000519817 WRNQ14191 1432 aaPredicted RBP eCLIP26.33■■□□□ 1.81
SNX16-207ENST00000519817 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.8
SNX16-207ENST00000519817 SYNJ1O43426 1573 aa26.28■■□□□ 1.8
SNX16-207ENST00000519817 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
SNX16-207ENST00000519817 TOP2BQ02880 1626 aa26.21■■□□□ 1.79
SNX16-207ENST00000519817 AEBP2Q6ZN18 517 aaPredicted RBP26.2■■□□□ 1.78
SNX16-207ENST00000519817 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
SNX16-207ENST00000519817 OSCARQ8IYS5 282 aa26.13■■□□□ 1.77
SNX16-207ENST00000519817 ABCA10Q8WWZ4 1543 aa26.13■■□□□ 1.77
SNX16-207ENST00000519817 WDR97A6NE52 1622 aa26.1■■□□□ 1.77
SNX16-207ENST00000519817 FBLN2P98095 1184 aa26.08■■□□□ 1.77
SNX16-207ENST00000519817 GAPVD1Q14C86 1478 aa26.06■■□□□ 1.76
SNX16-207ENST00000519817 SNAPC4Q5SXM2 1469 aa26.06■■□□□ 1.76
SNX16-207ENST00000519817 GRIN2BQ13224 1484 aa26.04■■□□□ 1.76
SNX16-207ENST00000519817 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
SNX16-207ENST00000519817 CHMP7Q8WUX9 453 aaPredicted RBP25.94■■□□□ 1.74
SNX16-207ENST00000519817 MAGI1Q96QZ7 1491 aaPredicted RBP25.93■■□□□ 1.74
SNX16-207ENST00000519817 CHD1O14646 1710 aa25.92■■□□□ 1.74
SNX16-207ENST00000519817 PBRM1Q86U86 1689 aa25.91■■□□□ 1.74
SNX16-207ENST00000519817 SYNJ2O15056 1496 aa25.87■■□□□ 1.73
SNX16-207ENST00000519817 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
SNX16-207ENST00000519817 ERICH3Q5RHP9 1530 aa25.77■■□□□ 1.72
SNX16-207ENST00000519817 ADAMTS12P58397 1594 aa25.77■■□□□ 1.72
SNX16-207ENST00000519817 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
SNX16-207ENST00000519817 KIF27Q86VH2 1401 aa25.76■■□□□ 1.71
SNX16-207ENST00000519817 FHAD1B1AJZ9 1412 aa25.75■■□□□ 1.71
SNX16-207ENST00000519817 IGF1RP08069 1367 aa25.73■■□□□ 1.71
SNX16-207ENST00000519817 GRIN2AQ12879 1464 aa25.72■■□□□ 1.71
SNX16-207ENST00000519817 CLASP1Q7Z460 1538 aa25.68■■□□□ 1.7
SNX16-207ENST00000519817 ARHGEF11O15085 1522 aa25.68■■□□□ 1.7
SNX16-207ENST00000519817 RUSC2Q8N2Y8 1516 aa25.67■■□□□ 1.7
SNX16-207ENST00000519817 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
SNX16-207ENST00000519817 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
SNX16-207ENST00000519817 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
SNX16-207ENST00000519817 CEP170Q5SW79 1584 aa25.61■■□□□ 1.69
SNX16-207ENST00000519817 NUP160Q12769 1436 aa25.61■■□□□ 1.69
SNX16-207ENST00000519817 CARMIL1Q5VZK9 1371 aa25.56■■□□□ 1.68
SNX16-207ENST00000519817 CYB5RLQ6IPT4 315 aa25.55■■□□□ 1.68
SNX16-207ENST00000519817 ARAP1Q96P48 1450 aa25.5■■□□□ 1.67
SNX16-207ENST00000519817 CUL7Q14999 1698 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms