RNA–Protein interactions for RNA: ENST00000519758.5

CDK16-213, Transcript of cyclin dependent kinase 16, humanhuman

TSL 3

Gene CDK16, Length 991 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-213ENST00000519758 NISCHQ9Y2I1 1504 aa42.7■■■■■ 4.43
CDK16-213ENST00000519758 CCDC180Q9P1Z9 1646 aa37.83■■■■□ 3.65
CDK16-213ENST00000519758 ABCC9O60706 1549 aa37.43■■■■□ 3.58
CDK16-213ENST00000519758 ZCCHC6Q5VYS8 1495 aaKnown RBP35.66■■■■□ 3.3
CDK16-213ENST00000519758 RB1CC1Q8TDY2 1594 aa35.6■■■■□ 3.29
CDK16-213ENST00000519758 DCAF8L2P0C7V8 631 aa35.44■■■■□ 3.26
CDK16-213ENST00000519758 NACADO15069 1562 aa35.42■■■■□ 3.26
CDK16-213ENST00000519758 MYO15BQ96JP2 1530 aa35.41■■■■□ 3.26
CDK16-213ENST00000519758 DCAF1Q9Y4B6 1507 aa35.4■■■■□ 3.26
CDK16-213ENST00000519758 DNAJC5BQ9UF47 199 aa35.18■■■■□ 3.22
CDK16-213ENST00000519758 PABPN1Q86U42 306 aaKnown RBP eCLIP34.96■■■■□ 3.19
CDK16-213ENST00000519758 UNC13AQ9UPW8 1703 aa34.68■■■■□ 3.14
CDK16-213ENST00000519758 BICRAQ9NZM4 1560 aa34.5■■■■□ 3.11
CDK16-213ENST00000519758 SCRIBQ14160 1630 aa34.44■■■■□ 3.1
CDK16-213ENST00000519758 SHROOM4Q9ULL8 1493 aa34.11■■■■□ 3.05
CDK16-213ENST00000519758 CC2D2AQ9P2K1 1620 aa33.74■■■□□ 2.99
CDK16-213ENST00000519758 CECR2Q9BXF3 1484 aa33.74■■■□□ 2.99
CDK16-213ENST00000519758 EIF4G1Q04637 1599 aaKnown RBP33.69■■■□□ 2.98
CDK16-213ENST00000519758 SMARCA4P51532 1647 aa33.05■■■□□ 2.88
CDK16-213ENST00000519758 BAZ1AQ9NRL2 1556 aaPredicted RBP33.03■■■□□ 2.88
CDK16-213ENST00000519758 MROH2BQ7Z745 1585 aa32.91■■■□□ 2.86
CDK16-213ENST00000519758 PEG3Q9GZU2 1588 aa32.79■■■□□ 2.84
CDK16-213ENST00000519758 ATAD2BQ9ULI0 1458 aa32.74■■■□□ 2.83
CDK16-213ENST00000519758 NCAPD3P42695 1498 aa32.74■■■□□ 2.83
CDK16-213ENST00000519758 SMARCA2P51531 1590 aa32.71■■■□□ 2.83
CDK16-213ENST00000519758 RSF1Q96T23 1441 aaPredicted RBP32.66■■■□□ 2.82
CDK16-213ENST00000519758 WIZO95785 1651 aa32.58■■■□□ 2.81
CDK16-213ENST00000519758 HMGXB3Q12766 1538 aa32.57■■■□□ 2.8
CDK16-213ENST00000519758 BAZ1BQ9UIG0 1483 aaKnown RBP32.43■■■□□ 2.78
CDK16-213ENST00000519758 DNAJC5Q9H3Z4 198 aa32.35■■■□□ 2.77
CDK16-213ENST00000519758 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
CDK16-213ENST00000519758 CUX2O14529 1486 aa32.25■■■□□ 2.75
CDK16-213ENST00000519758 TOP2AP11388 1531 aaKnown RBP32.24■■■□□ 2.75
CDK16-213ENST00000519758 NESP48681 1621 aa32.12■■■□□ 2.73
CDK16-213ENST00000519758 SUPT5HO00267 1087 aaKnown RBP31.95■■■□□ 2.71
CDK16-213ENST00000519758 LAMC3Q9Y6N6 1575 aa31.9■■■□□ 2.7
CDK16-213ENST00000519758 CCDC88BA6NC98 1476 aa31.85■■■□□ 2.69
CDK16-213ENST00000519758 PDS5BQ9NTI5 1447 aa31.83■■■□□ 2.69
CDK16-213ENST00000519758 CADPSQ9ULU8 1353 aa31.78■■■□□ 2.68
CDK16-213ENST00000519758 THOC2Q8NI27 1593 aaKnown RBP31.69■■■□□ 2.66
CDK16-213ENST00000519758 CFTRP13569 1480 aa31.65■■■□□ 2.66
CDK16-213ENST00000519758 KIF21AQ7Z4S6 1674 aa31.57■■■□□ 2.64
CDK16-213ENST00000519758 PRDM2Q13029 1718 aa31.52■■■□□ 2.64
CDK16-213ENST00000519758 MRC2Q9UBG0 1479 aa31.47■■■□□ 2.63
CDK16-213ENST00000519758 CEP164Q9UPV0 1460 aa31.35■■■□□ 2.61
CDK16-213ENST00000519758 WDR62O43379 1518 aa31.34■■■□□ 2.61
CDK16-213ENST00000519758 FANCD2Q9BXW9 1451 aa31.34■■■□□ 2.61
CDK16-213ENST00000519758 URB2Q14146 1524 aaKnown RBP31.04■■■□□ 2.56
CDK16-213ENST00000519758 OSCARQ8IYS5 282 aa30.96■■■□□ 2.55
CDK16-213ENST00000519758 TRIM41Q8WV44 630 aa30.92■■■□□ 2.54
CDK16-213ENST00000519758 DNMBPQ6XZF7 1577 aa30.92■■■□□ 2.54
CDK16-213ENST00000519758 TOPBP1Q92547 1522 aa30.91■■■□□ 2.54
CDK16-213ENST00000519758 ABCC8Q09428 1581 aa30.9■■■□□ 2.54
CDK16-213ENST00000519758 CUX1P39880 1505 aa30.84■■■□□ 2.53
CDK16-213ENST00000519758 IFT140Q96RY7 1462 aa30.76■■■□□ 2.51
CDK16-213ENST00000519758 BIVM-ERCC5R4GMW8 1640 aa30.73■■■□□ 2.51
CDK16-213ENST00000519758 WRNQ14191 1432 aaPredicted RBP eCLIP30.73■■■□□ 2.51
CDK16-213ENST00000519758 TOP2BQ02880 1626 aa30.7■■■□□ 2.51
CDK16-213ENST00000519758 SYNJ1O43426 1573 aa30.7■■■□□ 2.5
CDK16-213ENST00000519758 POLA1P09884 1462 aaPredicted RBP30.67■■■□□ 2.5
CDK16-213ENST00000519758 ZNF608Q9ULD9 1512 aaPredicted RBP30.67■■■□□ 2.5
CDK16-213ENST00000519758 FGD5Q6ZNL6 1462 aa30.63■■■□□ 2.49
CDK16-213ENST00000519758 TARBP1Q13395 1621 aaKnown RBP30.61■■■□□ 2.49
CDK16-213ENST00000519758 RAD54L2Q9Y4B4 1467 aa30.5■■■□□ 2.47
CDK16-213ENST00000519758 SOGA1O94964 1423 aa30.5■■■□□ 2.47
CDK16-213ENST00000519758 WDR97A6NE52 1622 aa30.48■■■□□ 2.47
CDK16-213ENST00000519758 AQRO60306 1485 aaKnown RBP eCLIP30.45■■■□□ 2.478e-9■■■■■ 38.5
CDK16-213ENST00000519758 ABCA10Q8WWZ4 1543 aa30.4■■■□□ 2.46
CDK16-213ENST00000519758 EIF4G3O43432 1585 aaKnown RBP30.4■■■□□ 2.46
CDK16-213ENST00000519758 FBLN2P98095 1184 aa30.36■■■□□ 2.45
CDK16-213ENST00000519758 TDRD9Q8NDG6 1382 aaKnown RBP30.3■■■□□ 2.44
CDK16-213ENST00000519758 RIMBP3CA6NJZ7 1639 aa30.29■■■□□ 2.44
CDK16-213ENST00000519758 RIMBP3BA6NNM3 1639 aa30.29■■■□□ 2.44
CDK16-213ENST00000519758 RIMBP3Q9UFD9 1639 aa30.29■■■□□ 2.44
CDK16-213ENST00000519758 ABCA5Q8WWZ7 1642 aa30.28■■■□□ 2.44
CDK16-213ENST00000519758 ARHGEF11O15085 1522 aa30.26■■■□□ 2.43
CDK16-213ENST00000519758 CYB5RLQ6IPT4 315 aa30.21■■■□□ 2.43
CDK16-213ENST00000519758 CHIC1Q5VXU3 224 aa30.17■■■□□ 2.42
CDK16-213ENST00000519758 GAPVD1Q14C86 1478 aa30.17■■■□□ 2.42
CDK16-213ENST00000519758 PBRM1Q86U86 1689 aa30.15■■■□□ 2.42
CDK16-213ENST00000519758 CHMP7Q8WUX9 453 aaPredicted RBP30.15■■■□□ 2.42
CDK16-213ENST00000519758 CHD1O14646 1710 aa30.11■■■□□ 2.41
CDK16-213ENST00000519758 GRIN2BQ13224 1484 aa30.11■■■□□ 2.41
CDK16-213ENST00000519758 SNAPC4Q5SXM2 1469 aa30.07■■■□□ 2.4
CDK16-213ENST00000519758 ERICH3Q5RHP9 1530 aa30.03■■■□□ 2.4
CDK16-213ENST00000519758 MAGI1Q96QZ7 1491 aaPredicted RBP30.03■■■□□ 2.4
CDK16-213ENST00000519758 KIF27Q86VH2 1401 aa30.03■■■□□ 2.4
CDK16-213ENST00000519758 RUSC2Q8N2Y8 1516 aa29.96■■■□□ 2.39
CDK16-213ENST00000519758 ARAP1Q96P48 1450 aa29.95■■■□□ 2.39
CDK16-213ENST00000519758 SYNJ2O15056 1496 aa29.93■■■□□ 2.38
CDK16-213ENST00000519758 IGF1RP08069 1367 aa29.93■■■□□ 2.38
CDK16-213ENST00000519758 ADAMTS12P58397 1594 aa29.92■■■□□ 2.38
CDK16-213ENST00000519758 TRHP20396 242 aaPredicted RBP29.88■■■□□ 2.37
CDK16-213ENST00000519758 CLASP1Q7Z460 1538 aa29.86■■■□□ 2.37
CDK16-213ENST00000519758 FHAD1B1AJZ9 1412 aa29.84■■■□□ 2.37
CDK16-213ENST00000519758 CUL7Q14999 1698 aa29.84■■■□□ 2.37
CDK16-213ENST00000519758 EEA1Q15075 1411 aa29.74■■■□□ 2.35
CDK16-213ENST00000519758 GRIN2AQ12879 1464 aa29.74■■■□□ 2.35
CDK16-213ENST00000519758 CARMIL1Q5VZK9 1371 aa29.7■■■□□ 2.35
CDK16-213ENST00000519758 PRXQ9BXM0 1461 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms