RNA–Protein interactions for RNA: ENST00000519739.5

EBF1-206, Transcript of early B cell factor 1, humanhuman

TSL 5

Gene EBF1, Length 4,735 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-206ENST00000519739 NISCHQ9Y2I1 1504 aa16.74■□□□□ 0.27
EBF1-206ENST00000519739 CCDC180Q9P1Z9 1646 aa14.51□□□□□ -0.09
EBF1-206ENST00000519739 ZCCHC6Q5VYS8 1495 aaKnown RBP14.22□□□□□ -0.13
EBF1-206ENST00000519739 DCAF1Q9Y4B6 1507 aa13.96□□□□□ -0.17
EBF1-206ENST00000519739 MYO15BQ96JP2 1530 aa13.68□□□□□ -0.22
EBF1-206ENST00000519739 SHROOM4Q9ULL8 1493 aa13.56□□□□□ -0.24
EBF1-206ENST00000519739 ABCC9O60706 1549 aa13.42□□□□□ -0.26
EBF1-206ENST00000519739 UNC13AQ9UPW8 1703 aa13.32□□□□□ -0.28
EBF1-206ENST00000519739 SCRIBQ14160 1630 aa13.25□□□□□ -0.29
EBF1-206ENST00000519739 NACADO15069 1562 aa13.22□□□□□ -0.29
EBF1-206ENST00000519739 EIF4G1Q04637 1599 aaKnown RBP13.12□□□□□ -0.31
EBF1-206ENST00000519739 RSF1Q96T23 1441 aaPredicted RBP13.11□□□□□ -0.31
EBF1-206ENST00000519739 RB1CC1Q8TDY2 1594 aa13.06□□□□□ -0.32
EBF1-206ENST00000519739 CECR2Q9BXF3 1484 aa13.03□□□□□ -0.32
EBF1-206ENST00000519739 SUPT5HO00267 1087 aaKnown RBP13.03□□□□□ -0.32
EBF1-206ENST00000519739 MROH2BQ7Z745 1585 aa13.01□□□□□ -0.33
EBF1-206ENST00000519739 BICRAQ9NZM4 1560 aa13□□□□□ -0.33
EBF1-206ENST00000519739 WIZO95785 1651 aa12.99□□□□□ -0.33
EBF1-206ENST00000519739 CHIC1Q5VXU3 224 aa12.98□□□□□ -0.33
EBF1-206ENST00000519739 BAZ1AQ9NRL2 1556 aaPredicted RBP12.91□□□□□ -0.34
EBF1-206ENST00000519739 DCAF8L2P0C7V8 631 aa12.88□□□□□ -0.35
EBF1-206ENST00000519739 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
EBF1-206ENST00000519739 SMARCA4P51532 1647 aa12.84□□□□□ -0.35
EBF1-206ENST00000519739 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
EBF1-206ENST00000519739 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
EBF1-206ENST00000519739 TOP2AP11388 1531 aaKnown RBP12.71□□□□□ -0.37
EBF1-206ENST00000519739 CCDC88BA6NC98 1476 aa12.58□□□□□ -0.4
EBF1-206ENST00000519739 MYT1Q01538 1121 aa12.53□□□□□ -0.4
EBF1-206ENST00000519739 ABCC8Q09428 1581 aa12.5□□□□□ -0.41
EBF1-206ENST00000519739 LOC105371045A0A1W2PR82 267 aa12.47□□□□□ -0.41
EBF1-206ENST00000519739 ATAD2BQ9ULI0 1458 aa12.42□□□□□ -0.42
EBF1-206ENST00000519739 SYNJ1O43426 1573 aa12.4□□□□□ -0.42
EBF1-206ENST00000519739 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
EBF1-206ENST00000519739 RUSC2Q8N2Y8 1516 aa12.33□□□□□ -0.44
EBF1-206ENST00000519739 AEBP2Q6ZN18 517 aaPredicted RBP12.32□□□□□ -0.44
EBF1-206ENST00000519739 BIVM-ERCC5R4GMW8 1640 aa12.32□□□□□ -0.44
EBF1-206ENST00000519739 HMGXB3Q12766 1538 aa12.31□□□□□ -0.44
EBF1-206ENST00000519739 SOGA1O94964 1423 aa12.26□□□□□ -0.45
EBF1-206ENST00000519739 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
EBF1-206ENST00000519739 TOP2BQ02880 1626 aa12.25□□□□□ -0.45
EBF1-206ENST00000519739 NCAPD3P42695 1498 aa12.23□□□□□ -0.45
EBF1-206ENST00000519739 PRKCSHP14314 528 aaPredicted RBP12.22□□□□□ -0.45
EBF1-206ENST00000519739 HRCP23327 699 aa12.2□□□□□ -0.46
EBF1-206ENST00000519739 KIF21BO75037 1637 aa12.2□□□□□ -0.46
EBF1-206ENST00000519739 BAZ1BQ9UIG0 1483 aaKnown RBP12.18□□□□□ -0.46
EBF1-206ENST00000519739 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
EBF1-206ENST00000519739 WRNQ14191 1432 aaPredicted RBP eCLIP12.17□□□□□ -0.46
EBF1-206ENST00000519739 PPARGC1BQ86YN6 1023 aaKnown RBP12.17□□□□□ -0.46
EBF1-206ENST00000519739 EEA1Q15075 1411 aa12.15□□□□□ -0.46
EBF1-206ENST00000519739 SCAF1Q9H7N4 1312 aaKnown RBP12.14□□□□□ -0.47
EBF1-206ENST00000519739 CUX1P39880 1505 aa12.14□□□□□ -0.47
EBF1-206ENST00000519739 CFTRP13569 1480 aa12.1□□□□□ -0.47
EBF1-206ENST00000519739 PCGF6Q9BYE7 350 aa12.06□□□□□ -0.48
EBF1-206ENST00000519739 CC2D2AQ9P2K1 1620 aa12.04□□□□□ -0.48
EBF1-206ENST00000519739 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.49
EBF1-206ENST00000519739 WDR97A6NE52 1622 aa12.02□□□□□ -0.49
EBF1-206ENST00000519739 PRXQ9BXM0 1461 aa12.01□□□□□ -0.49
EBF1-206ENST00000519739 CEP162Q5TB80 1403 aa12.01□□□□□ -0.49
EBF1-206ENST00000519739 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
EBF1-206ENST00000519739 ERICH3Q5RHP9 1530 aa11.98□□□□□ -0.49
EBF1-206ENST00000519739 TTBK1Q5TCY1 1321 aaPredicted RBP11.97□□□□□ -0.49
EBF1-206ENST00000519739 TRIM26Q12899 539 aaPredicted RBP11.97□□□□□ -0.49
EBF1-206ENST00000519739 BCL11AQ9H165 835 aa11.96□□□□□ -0.49
EBF1-206ENST00000519739 FAM9AQ8IZU1 332 aaPredicted RBP11.95□□□□□ -0.5
EBF1-206ENST00000519739 GOLGA3Q08378 1498 aa11.94□□□□□ -0.5
EBF1-206ENST00000519739 CEP164Q9UPV0 1460 aa11.91□□□□□ -0.5
EBF1-206ENST00000519739 ARAP1Q96P48 1450 aa11.9□□□□□ -0.51
EBF1-206ENST00000519739 LRRIQ1Q96JM4 1722 aa11.87□□□□□ -0.51
EBF1-206ENST00000519739 CSRNP3Q8WYN3 585 aa11.86□□□□□ -0.51
EBF1-206ENST00000519739 CLIP1P30622 1438 aa11.83□□□□□ -0.52
EBF1-206ENST00000519739 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
EBF1-206ENST00000519739 ABCA5Q8WWZ7 1642 aa11.8□□□□□ -0.52
EBF1-206ENST00000519739 CADPSQ9ULU8 1353 aa11.79□□□□□ -0.52
EBF1-206ENST00000519739 NESP48681 1621 aa11.79□□□□□ -0.52
EBF1-206ENST00000519739 DNMBPQ6XZF7 1577 aa11.78□□□□□ -0.52
EBF1-206ENST00000519739 VPS8Q8N3P4 1428 aa11.78□□□□□ -0.52
EBF1-206ENST00000519739 FGD5Q6ZNL6 1462 aa11.77□□□□□ -0.53
EBF1-206ENST00000519739 ARHGAP35Q9NRY4 1499 aa11.77□□□□□ -0.53
EBF1-206ENST00000519739 TARBP1Q13395 1621 aaKnown RBP11.76□□□□□ -0.53
EBF1-206ENST00000519739 MAP3K1Q13233 1512 aa11.76□□□□□ -0.53
EBF1-206ENST00000519739 DNAJC5BQ9UF47 199 aa11.75□□□□□ -0.53
EBF1-206ENST00000519739 URB2Q14146 1524 aaKnown RBP11.75□□□□□ -0.53
EBF1-206ENST00000519739 LAMC3Q9Y6N6 1575 aa11.74□□□□□ -0.53
EBF1-206ENST00000519739 CTTNBP2Q8WZ74 1663 aa11.73□□□□□ -0.53
EBF1-206ENST00000519739 ABCA10Q8WWZ4 1543 aa11.73□□□□□ -0.53
EBF1-206ENST00000519739 IGF1RP08069 1367 aa11.73□□□□□ -0.53
EBF1-206ENST00000519739 TOPBP1Q92547 1522 aa11.73□□□□□ -0.53
EBF1-206ENST00000519739 CFAP43Q8NDM7 1665 aa11.72□□□□□ -0.53
EBF1-206ENST00000519739 EHMT2Q96KQ7 1210 aa11.72□□□□□ -0.53
EBF1-206ENST00000519739 POLA1P09884 1462 aaPredicted RBP11.72□□□□□ -0.53
EBF1-206ENST00000519739 ZEB1P37275 1124 aaPredicted RBP11.71□□□□□ -0.54
EBF1-206ENST00000519739 CUX2O14529 1486 aa11.71□□□□□ -0.54
EBF1-206ENST00000519739 FANCD2Q9BXW9 1451 aa11.71□□□□□ -0.54
EBF1-206ENST00000519739 SAMD9Q5K651 1589 aa11.68□□□□□ -0.54
EBF1-206ENST00000519739 CUL7Q14999 1698 aa11.66□□□□□ -0.54
EBF1-206ENST00000519739 APLP2Q06481 763 aa11.66□□□□□ -0.54
EBF1-206ENST00000519739 KIF27Q86VH2 1401 aa11.65□□□□□ -0.54
EBF1-206ENST00000519739 RAD54L2Q9Y4B4 1467 aa11.65□□□□□ -0.55
EBF1-206ENST00000519739 PBRM1Q86U86 1689 aa11.63□□□□□ -0.55
EBF1-206ENST00000519739 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms