RNA–Protein interactions for RNA: ENST00000519733.5

IKBKB-211, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 4

Gene IKBKB, Length 527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-211ENST00000519733 NISCHQ9Y2I1 1504 aa35.14■■■■□ 3.22
IKBKB-211ENST00000519733 ABCC9O60706 1549 aa31.54■■■□□ 2.64
IKBKB-211ENST00000519733 CCDC180Q9P1Z9 1646 aa31.36■■■□□ 2.61
IKBKB-211ENST00000519733 RB1CC1Q8TDY2 1594 aa29.97■■■□□ 2.39
IKBKB-211ENST00000519733 DNAJC5BQ9UF47 199 aa29.8■■■□□ 2.36
IKBKB-211ENST00000519733 NACADO15069 1562 aa29.73■■■□□ 2.35
IKBKB-211ENST00000519733 DCAF8L2P0C7V8 631 aa29.61■■■□□ 2.33
IKBKB-211ENST00000519733 PABPN1Q86U42 306 aaKnown RBP eCLIP29.37■■■□□ 2.29
IKBKB-211ENST00000519733 MYO15BQ96JP2 1530 aa29.35■■■□□ 2.29
IKBKB-211ENST00000519733 UNC13AQ9UPW8 1703 aa29.18■■■□□ 2.26
IKBKB-211ENST00000519733 ZCCHC6Q5VYS8 1495 aaKnown RBP29.16■■■□□ 2.26
IKBKB-211ENST00000519733 BICRAQ9NZM4 1560 aa29.08■■■□□ 2.25
IKBKB-211ENST00000519733 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
IKBKB-211ENST00000519733 SHROOM4Q9ULL8 1493 aa28.74■■■□□ 2.19
IKBKB-211ENST00000519733 SCRIBQ14160 1630 aa28.61■■■□□ 2.17
IKBKB-211ENST00000519733 CC2D2AQ9P2K1 1620 aa28.48■■■□□ 2.15
IKBKB-211ENST00000519733 CECR2Q9BXF3 1484 aa28.46■■■□□ 2.15
IKBKB-211ENST00000519733 EIF4G1Q04637 1599 aaKnown RBP28.39■■■□□ 2.14
IKBKB-211ENST00000519733 DNAJC5Q9H3Z4 198 aa27.55■■■□□ 2
IKBKB-211ENST00000519733 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
IKBKB-211ENST00000519733 ATAD2BQ9ULI0 1458 aa27.37■■□□□ 1.97
IKBKB-211ENST00000519733 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
IKBKB-211ENST00000519733 CUX2O14529 1486 aa27.32■■□□□ 1.96
IKBKB-211ENST00000519733 ERCC6Q03468 1493 aa27.27■■□□□ 1.96
IKBKB-211ENST00000519733 SMARCA2P51531 1590 aa27.26■■□□□ 1.95
IKBKB-211ENST00000519733 BAZ1AQ9NRL2 1556 aaPredicted RBP27.23■■□□□ 1.95
IKBKB-211ENST00000519733 HMGXB3Q12766 1538 aa27.22■■□□□ 1.95
IKBKB-211ENST00000519733 BAZ1BQ9UIG0 1483 aaKnown RBP27.08■■□□□ 1.93
IKBKB-211ENST00000519733 MROH2BQ7Z745 1585 aa27.08■■□□□ 1.93
IKBKB-211ENST00000519733 PEG3Q9GZU2 1588 aa27.08■■□□□ 1.93
IKBKB-211ENST00000519733 NESP48681 1621 aa27.04■■□□□ 1.92
IKBKB-211ENST00000519733 LAMC3Q9Y6N6 1575 aa26.85■■□□□ 1.89
IKBKB-211ENST00000519733 THOC2Q8NI27 1593 aaKnown RBP26.79■■□□□ 1.88
IKBKB-211ENST00000519733 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
IKBKB-211ENST00000519733 WIZO95785 1651 aa26.72■■□□□ 1.87
IKBKB-211ENST00000519733 CADPSQ9ULU8 1353 aa26.64■■□□□ 1.86
IKBKB-211ENST00000519733 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
IKBKB-211ENST00000519733 RSF1Q96T23 1441 aaPredicted RBP26.62■■□□□ 1.85
IKBKB-211ENST00000519733 MRC2Q9UBG0 1479 aa26.49■■□□□ 1.83
IKBKB-211ENST00000519733 WDR62O43379 1518 aa26.42■■□□□ 1.82
IKBKB-211ENST00000519733 TOP2AP11388 1531 aaKnown RBP26.41■■□□□ 1.82
IKBKB-211ENST00000519733 CFTRP13569 1480 aa26.34■■□□□ 1.81
IKBKB-211ENST00000519733 CEP164Q9UPV0 1460 aa26.34■■□□□ 1.81
IKBKB-211ENST00000519733 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
IKBKB-211ENST00000519733 TRIM41Q8WV44 630 aa26.2■■□□□ 1.78
IKBKB-211ENST00000519733 CCDC88BA6NC98 1476 aa26.16■■□□□ 1.78
IKBKB-211ENST00000519733 URB2Q14146 1524 aaKnown RBP26.08■■□□□ 1.77
IKBKB-211ENST00000519733 OSCARQ8IYS5 282 aa26.07■■□□□ 1.76
IKBKB-211ENST00000519733 PRDM2Q13029 1718 aa25.92■■□□□ 1.74
IKBKB-211ENST00000519733 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
IKBKB-211ENST00000519733 TOPBP1Q92547 1522 aa25.8■■□□□ 1.72
IKBKB-211ENST00000519733 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
IKBKB-211ENST00000519733 ABCC8Q09428 1581 aa25.76■■□□□ 1.71
IKBKB-211ENST00000519733 DNMBPQ6XZF7 1577 aa25.69■■□□□ 1.7
IKBKB-211ENST00000519733 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
IKBKB-211ENST00000519733 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
IKBKB-211ENST00000519733 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
IKBKB-211ENST00000519733 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
IKBKB-211ENST00000519733 ARHGEF11O15085 1522 aa25.59■■□□□ 1.69
IKBKB-211ENST00000519733 SUPT5HO00267 1087 aaKnown RBP25.58■■□□□ 1.69
IKBKB-211ENST00000519733 POLA1P09884 1462 aaPredicted RBP25.55■■□□□ 1.68
IKBKB-211ENST00000519733 AQRO60306 1485 aaKnown RBP eCLIP25.54■■□□□ 1.686e-6■■■■□ 25.1
IKBKB-211ENST00000519733 TARBP1Q13395 1621 aaKnown RBP25.54■■□□□ 1.68
IKBKB-211ENST00000519733 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
IKBKB-211ENST00000519733 SOGA1O94964 1423 aa25.46■■□□□ 1.67
IKBKB-211ENST00000519733 CYB5RLQ6IPT4 315 aa25.44■■□□□ 1.66
IKBKB-211ENST00000519733 CUX1P39880 1505 aa25.42■■□□□ 1.66
IKBKB-211ENST00000519733 FBLN2P98095 1184 aa25.42■■□□□ 1.66
IKBKB-211ENST00000519733 FGD5Q6ZNL6 1462 aa25.41■■□□□ 1.66
IKBKB-211ENST00000519733 CHD1O14646 1710 aa25.41■■□□□ 1.66
IKBKB-211ENST00000519733 TDRD9Q8NDG6 1382 aaKnown RBP25.4■■□□□ 1.66
IKBKB-211ENST00000519733 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
IKBKB-211ENST00000519733 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
IKBKB-211ENST00000519733 SNAPC4Q5SXM2 1469 aa25.26■■□□□ 1.63
IKBKB-211ENST00000519733 CHMP7Q8WUX9 453 aaPredicted RBP25.24■■□□□ 1.63
IKBKB-211ENST00000519733 MAGI1Q96QZ7 1491 aaPredicted RBP25.22■■□□□ 1.63
IKBKB-211ENST00000519733 TRHP20396 242 aaPredicted RBP25.21■■□□□ 1.63
IKBKB-211ENST00000519733 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
IKBKB-211ENST00000519733 CLASP1Q7Z460 1538 aa25.19■■□□□ 1.62
IKBKB-211ENST00000519733 SYNJ1O43426 1573 aa25.16■■□□□ 1.62
IKBKB-211ENST00000519733 ABCA10Q8WWZ4 1543 aa25.15■■□□□ 1.62
IKBKB-211ENST00000519733 SYNJ2O15056 1496 aa25.14■■□□□ 1.61
IKBKB-211ENST00000519733 GAPVD1Q14C86 1478 aa25.14■■□□□ 1.61
IKBKB-211ENST00000519733 WRNQ14191 1432 aaPredicted RBP eCLIP25.1■■□□□ 1.61
IKBKB-211ENST00000519733 ABCA5Q8WWZ7 1642 aa25.04■■□□□ 1.6
IKBKB-211ENST00000519733 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
IKBKB-211ENST00000519733 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
IKBKB-211ENST00000519733 PBRM1Q86U86 1689 aa25.01■■□□□ 1.59
IKBKB-211ENST00000519733 GRIN2AQ12879 1464 aa24.87■■□□□ 1.57
IKBKB-211ENST00000519733 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
IKBKB-211ENST00000519733 FHAD1B1AJZ9 1412 aa24.84■■□□□ 1.57
IKBKB-211ENST00000519733 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
IKBKB-211ENST00000519733 NUP160Q12769 1436 aa24.8■■□□□ 1.56
IKBKB-211ENST00000519733 CEP170Q5SW79 1584 aa24.75■■□□□ 1.55
IKBKB-211ENST00000519733 ERCC6L2Q5T890 1561 aa24.75■■□□□ 1.55
IKBKB-211ENST00000519733 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
IKBKB-211ENST00000519733 AEBP2Q6ZN18 517 aaPredicted RBP24.63■■□□□ 1.53
IKBKB-211ENST00000519733 IGF1RP08069 1367 aa24.62■■□□□ 1.53
IKBKB-211ENST00000519733 KIF27Q86VH2 1401 aa24.6■■□□□ 1.53
IKBKB-211ENST00000519733 JPH4Q96JJ6 628 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms