RNA–Protein interactions for RNA: ENST00000519662.5

HMBOX1-207, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-207ENST00000519662 NISCHQ9Y2I1 1504 aa26.75■■□□□ 1.87
HMBOX1-207ENST00000519662 CCDC180Q9P1Z9 1646 aa23.92■■□□□ 1.42
HMBOX1-207ENST00000519662 ABCC9O60706 1549 aa23.16■■□□□ 1.3
HMBOX1-207ENST00000519662 RB1CC1Q8TDY2 1594 aa22.43■■□□□ 1.18
HMBOX1-207ENST00000519662 NACADO15069 1562 aa22.42■■□□□ 1.18
HMBOX1-207ENST00000519662 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
HMBOX1-207ENST00000519662 ZCCHC6Q5VYS8 1495 aaKnown RBP22.29■■□□□ 1.16
HMBOX1-207ENST00000519662 DCAF1Q9Y4B6 1507 aa22.24■■□□□ 1.15
HMBOX1-207ENST00000519662 DCAF8L2P0C7V8 631 aa22.1■■□□□ 1.13
HMBOX1-207ENST00000519662 UNC13AQ9UPW8 1703 aa22.02■■□□□ 1.12
HMBOX1-207ENST00000519662 BICRAQ9NZM4 1560 aa21.74■■□□□ 1.07
HMBOX1-207ENST00000519662 SCRIBQ14160 1630 aa21.63■■□□□ 1.05
HMBOX1-207ENST00000519662 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
HMBOX1-207ENST00000519662 PABPN1Q86U42 306 aaKnown RBP eCLIP21.56■■□□□ 1.04
HMBOX1-207ENST00000519662 DNAJC5BQ9UF47 199 aa21.51■■□□□ 1.03
HMBOX1-207ENST00000519662 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.98
HMBOX1-207ENST00000519662 CC2D2AQ9P2K1 1620 aa21.06■□□□□ 0.96
HMBOX1-207ENST00000519662 CECR2Q9BXF3 1484 aa20.86■□□□□ 0.93
HMBOX1-207ENST00000519662 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
HMBOX1-207ENST00000519662 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
HMBOX1-207ENST00000519662 SMARCA2P51531 1590 aa20.66■□□□□ 0.9
HMBOX1-207ENST00000519662 PEG3Q9GZU2 1588 aa20.65■□□□□ 0.9
HMBOX1-207ENST00000519662 NCAPD3P42695 1498 aa20.65■□□□□ 0.9
HMBOX1-207ENST00000519662 ATAD2BQ9ULI0 1458 aa20.62■□□□□ 0.89
HMBOX1-207ENST00000519662 HMGXB3Q12766 1538 aa20.59■□□□□ 0.89
HMBOX1-207ENST00000519662 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
HMBOX1-207ENST00000519662 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
HMBOX1-207ENST00000519662 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
HMBOX1-207ENST00000519662 WIZO95785 1651 aa20.38■□□□□ 0.85
HMBOX1-207ENST00000519662 RSF1Q96T23 1441 aaPredicted RBP20.32■□□□□ 0.84
HMBOX1-207ENST00000519662 TOP2AP11388 1531 aaKnown RBP20.18■□□□□ 0.82
HMBOX1-207ENST00000519662 LAMC3Q9Y6N6 1575 aa20.15■□□□□ 0.82
HMBOX1-207ENST00000519662 NESP48681 1621 aa20.05■□□□□ 0.8
HMBOX1-207ENST00000519662 CADPSQ9ULU8 1353 aa20■□□□□ 0.79
HMBOX1-207ENST00000519662 ERCC6Q03468 1493 aa19.98■□□□□ 0.79
HMBOX1-207ENST00000519662 PRDM2Q13029 1718 aa19.95■□□□□ 0.78
HMBOX1-207ENST00000519662 PDS5BQ9NTI5 1447 aa19.94■□□□□ 0.78
HMBOX1-207ENST00000519662 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
HMBOX1-207ENST00000519662 CFTRP13569 1480 aa19.92■□□□□ 0.78
HMBOX1-207ENST00000519662 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
HMBOX1-207ENST00000519662 CUX2O14529 1486 aa19.88■□□□□ 0.77
HMBOX1-207ENST00000519662 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
HMBOX1-207ENST00000519662 FANCD2Q9BXW9 1451 aa19.76■□□□□ 0.75
HMBOX1-207ENST00000519662 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
HMBOX1-207ENST00000519662 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
HMBOX1-207ENST00000519662 WDR62O43379 1518 aa19.71■□□□□ 0.75
HMBOX1-207ENST00000519662 SUPT5HO00267 1087 aaKnown RBP19.64■□□□□ 0.73
HMBOX1-207ENST00000519662 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
HMBOX1-207ENST00000519662 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
HMBOX1-207ENST00000519662 DNMBPQ6XZF7 1577 aa19.49■□□□□ 0.71
HMBOX1-207ENST00000519662 TOPBP1Q92547 1522 aa19.47■□□□□ 0.71
HMBOX1-207ENST00000519662 IFT140Q96RY7 1462 aa19.35■□□□□ 0.69
HMBOX1-207ENST00000519662 TARBP1Q13395 1621 aaKnown RBP19.31■□□□□ 0.68
HMBOX1-207ENST00000519662 CUX1P39880 1505 aa19.3■□□□□ 0.68
HMBOX1-207ENST00000519662 POLA1P09884 1462 aaPredicted RBP19.29■□□□□ 0.68
HMBOX1-207ENST00000519662 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
HMBOX1-207ENST00000519662 BIVM-ERCC5R4GMW8 1640 aa19.24■□□□□ 0.67
HMBOX1-207ENST00000519662 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
HMBOX1-207ENST00000519662 EIF4G3O43432 1585 aaKnown RBP19.21■□□□□ 0.67
HMBOX1-207ENST00000519662 TOP2BQ02880 1626 aa19.2■□□□□ 0.66
HMBOX1-207ENST00000519662 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
HMBOX1-207ENST00000519662 SOGA1O94964 1423 aa19.17■□□□□ 0.66
HMBOX1-207ENST00000519662 WRNQ14191 1432 aaPredicted RBP eCLIP19.16■□□□□ 0.66
HMBOX1-207ENST00000519662 RAD54L2Q9Y4B4 1467 aa19.14■□□□□ 0.65
HMBOX1-207ENST00000519662 SYNJ1O43426 1573 aa19.14■□□□□ 0.65
HMBOX1-207ENST00000519662 TRIM41Q8WV44 630 aa19.12■□□□□ 0.65
HMBOX1-207ENST00000519662 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
HMBOX1-207ENST00000519662 AQRO60306 1485 aaKnown RBP eCLIP19.08■□□□□ 0.64
HMBOX1-207ENST00000519662 ABCA5Q8WWZ7 1642 aa19.05■□□□□ 0.64
HMBOX1-207ENST00000519662 PBRM1Q86U86 1689 aa19.05■□□□□ 0.64
HMBOX1-207ENST00000519662 TDRD9Q8NDG6 1382 aaKnown RBP19.02■□□□□ 0.64
HMBOX1-207ENST00000519662 CHD1O14646 1710 aa19.01■□□□□ 0.63
HMBOX1-207ENST00000519662 GRIN2BQ13224 1484 aa19■□□□□ 0.63
HMBOX1-207ENST00000519662 GAPVD1Q14C86 1478 aa18.98■□□□□ 0.63
HMBOX1-207ENST00000519662 MAGI1Q96QZ7 1491 aaPredicted RBP18.98■□□□□ 0.63
HMBOX1-207ENST00000519662 OSCARQ8IYS5 282 aa18.96■□□□□ 0.63
HMBOX1-207ENST00000519662 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
HMBOX1-207ENST00000519662 ERICH3Q5RHP9 1530 aa18.9■□□□□ 0.62
HMBOX1-207ENST00000519662 SYNJ2O15056 1496 aa18.89■□□□□ 0.61
HMBOX1-207ENST00000519662 ADAMTS12P58397 1594 aa18.84■□□□□ 0.61
HMBOX1-207ENST00000519662 CLASP1Q7Z460 1538 aa18.78■□□□□ 0.6
HMBOX1-207ENST00000519662 FHAD1B1AJZ9 1412 aa18.77■□□□□ 0.6
HMBOX1-207ENST00000519662 KIF27Q86VH2 1401 aa18.77■□□□□ 0.6
HMBOX1-207ENST00000519662 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.6
HMBOX1-207ENST00000519662 GRIN2AQ12879 1464 aa18.76■□□□□ 0.59
HMBOX1-207ENST00000519662 CUL7Q14999 1698 aa18.76■□□□□ 0.59
HMBOX1-207ENST00000519662 FBLN2P98095 1184 aa18.75■□□□□ 0.59
HMBOX1-207ENST00000519662 RIMBP3CA6NJZ7 1639 aa18.73■□□□□ 0.59
HMBOX1-207ENST00000519662 RIMBP3BA6NNM3 1639 aa18.73■□□□□ 0.59
HMBOX1-207ENST00000519662 RIMBP3Q9UFD9 1639 aa18.73■□□□□ 0.59
HMBOX1-207ENST00000519662 ARHGEF11O15085 1522 aa18.69■□□□□ 0.58
HMBOX1-207ENST00000519662 NUP160Q12769 1436 aa18.69■□□□□ 0.58
HMBOX1-207ENST00000519662 IGF1RP08069 1367 aa18.68■□□□□ 0.58
HMBOX1-207ENST00000519662 CEP170Q5SW79 1584 aa18.66■□□□□ 0.58
HMBOX1-207ENST00000519662 SHROOM2Q13796 1616 aa18.63■□□□□ 0.57
HMBOX1-207ENST00000519662 RUSC2Q8N2Y8 1516 aa18.57■□□□□ 0.56
HMBOX1-207ENST00000519662 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
HMBOX1-207ENST00000519662 ARAP1Q96P48 1450 aa18.52■□□□□ 0.56
HMBOX1-207ENST00000519662 KIAA0586Q9BVV6 1533 aa18.5■□□□□ 0.55
HMBOX1-207ENST00000519662 RAPGEF2Q9Y4G8 1499 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms