RNA–Protein interactions for RNA: ENST00000519657.5

RBPMS-208, Transcript of RNA binding protein, mRNA processing factor, humanhuman

TSL 2

Gene RBPMS, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBPMS-208ENST00000519657 NISCHQ9Y2I1 1504 aa29.55■■■□□ 2.32
RBPMS-208ENST00000519657 CCDC180Q9P1Z9 1646 aa26.45■■□□□ 1.82
RBPMS-208ENST00000519657 ABCC9O60706 1549 aa26.19■■□□□ 1.78
RBPMS-208ENST00000519657 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
RBPMS-208ENST00000519657 NACADO15069 1562 aa24.95■■□□□ 1.58
RBPMS-208ENST00000519657 MYO15BQ96JP2 1530 aa24.73■■□□□ 1.55
RBPMS-208ENST00000519657 DCAF8L2P0C7V8 631 aa24.66■■□□□ 1.54
RBPMS-208ENST00000519657 ZCCHC6Q5VYS8 1495 aaKnown RBP24.53■■□□□ 1.52
RBPMS-208ENST00000519657 UNC13AQ9UPW8 1703 aa24.52■■□□□ 1.52
RBPMS-208ENST00000519657 DCAF1Q9Y4B6 1507 aa24.47■■□□□ 1.51
RBPMS-208ENST00000519657 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
RBPMS-208ENST00000519657 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.49
RBPMS-208ENST00000519657 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
RBPMS-208ENST00000519657 SHROOM4Q9ULL8 1493 aa24.08■■□□□ 1.45
RBPMS-208ENST00000519657 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
RBPMS-208ENST00000519657 EIF4G1Q04637 1599 aaKnown RBP23.72■■□□□ 1.39
RBPMS-208ENST00000519657 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.39
RBPMS-208ENST00000519657 CECR2Q9BXF3 1484 aa23.59■■□□□ 1.37
RBPMS-208ENST00000519657 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
RBPMS-208ENST00000519657 SMARCA4P51532 1647 aa23■■□□□ 1.27
RBPMS-208ENST00000519657 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
RBPMS-208ENST00000519657 SMARCA2P51531 1590 aa22.91■■□□□ 1.26
RBPMS-208ENST00000519657 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
RBPMS-208ENST00000519657 HMGXB3Q12766 1538 aa22.89■■□□□ 1.26
RBPMS-208ENST00000519657 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
RBPMS-208ENST00000519657 MROH2BQ7Z745 1585 aa22.75■■□□□ 1.23
RBPMS-208ENST00000519657 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
RBPMS-208ENST00000519657 NESP48681 1621 aa22.57■■□□□ 1.2
RBPMS-208ENST00000519657 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
RBPMS-208ENST00000519657 CUX2O14529 1486 aa22.55■■□□□ 1.2
RBPMS-208ENST00000519657 LAMC3Q9Y6N6 1575 aa22.47■■□□□ 1.19
RBPMS-208ENST00000519657 WIZO95785 1651 aa22.46■■□□□ 1.19
RBPMS-208ENST00000519657 THOC2Q8NI27 1593 aaKnown RBP22.36■■□□□ 1.17
RBPMS-208ENST00000519657 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
RBPMS-208ENST00000519657 DNAJC5Q9H3Z4 198 aa22.32■■□□□ 1.16
RBPMS-208ENST00000519657 CADPSQ9ULU8 1353 aa22.32■■□□□ 1.16
RBPMS-208ENST00000519657 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
RBPMS-208ENST00000519657 KIF21AQ7Z4S6 1674 aa22.3■■□□□ 1.16
RBPMS-208ENST00000519657 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
RBPMS-208ENST00000519657 CFTRP13569 1480 aa22.13■■□□□ 1.13
RBPMS-208ENST00000519657 MRC2Q9UBG0 1479 aa22.11■■□□□ 1.13
RBPMS-208ENST00000519657 WDR62O43379 1518 aa22.09■■□□□ 1.13
RBPMS-208ENST00000519657 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
RBPMS-208ENST00000519657 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
RBPMS-208ENST00000519657 CCDC88BA6NC98 1476 aa21.95■■□□□ 1.1
RBPMS-208ENST00000519657 PRDM2Q13029 1718 aa21.92■■□□□ 1.1
RBPMS-208ENST00000519657 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
RBPMS-208ENST00000519657 TOPBP1Q92547 1522 aa21.66■■□□□ 1.06
RBPMS-208ENST00000519657 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
RBPMS-208ENST00000519657 IFT140Q96RY7 1462 aa21.62■■□□□ 1.05
RBPMS-208ENST00000519657 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
RBPMS-208ENST00000519657 ZNF608Q9ULD9 1512 aaPredicted RBP21.57■■□□□ 1.04
RBPMS-208ENST00000519657 TARBP1Q13395 1621 aaKnown RBP21.5■■□□□ 1.03
RBPMS-208ENST00000519657 OSCARQ8IYS5 282 aa21.49■■□□□ 1.03
RBPMS-208ENST00000519657 POLA1P09884 1462 aaPredicted RBP21.46■■□□□ 1.03
RBPMS-208ENST00000519657 EIF4G3O43432 1585 aaKnown RBP21.46■■□□□ 1.03
RBPMS-208ENST00000519657 CUX1P39880 1505 aa21.37■■□□□ 1.01
RBPMS-208ENST00000519657 AQRO60306 1485 aaKnown RBP eCLIP21.37■■□□□ 1.016e-7■■■□□ 15.2
RBPMS-208ENST00000519657 RAD54L2Q9Y4B4 1467 aa21.35■■□□□ 1.01
RBPMS-208ENST00000519657 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
RBPMS-208ENST00000519657 FGD5Q6ZNL6 1462 aa21.33■■□□□ 1.01
RBPMS-208ENST00000519657 SOGA1O94964 1423 aa21.33■■□□□ 1.01
RBPMS-208ENST00000519657 WDR97A6NE52 1622 aa21.3■■□□□ 1
RBPMS-208ENST00000519657 TRIM41Q8WV44 630 aa21.29■■□□□ 1
RBPMS-208ENST00000519657 CHD1O14646 1710 aa21.26■□□□□ 0.99
RBPMS-208ENST00000519657 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
RBPMS-208ENST00000519657 RIMBP3CA6NJZ7 1639 aa21.23■□□□□ 0.99
RBPMS-208ENST00000519657 RIMBP3BA6NNM3 1639 aa21.23■□□□□ 0.99
RBPMS-208ENST00000519657 RIMBP3Q9UFD9 1639 aa21.23■□□□□ 0.99
RBPMS-208ENST00000519657 ARHGEF11O15085 1522 aa21.19■□□□□ 0.98
RBPMS-208ENST00000519657 SNAPC4Q5SXM2 1469 aa21.16■□□□□ 0.98
RBPMS-208ENST00000519657 GRIN2BQ13224 1484 aa21.14■□□□□ 0.98
RBPMS-208ENST00000519657 MAGI1Q96QZ7 1491 aaPredicted RBP21.14■□□□□ 0.98
RBPMS-208ENST00000519657 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.97
RBPMS-208ENST00000519657 ABCA5Q8WWZ7 1642 aa21.09■□□□□ 0.97
RBPMS-208ENST00000519657 BIVM-ERCC5R4GMW8 1640 aa21.09■□□□□ 0.97
RBPMS-208ENST00000519657 FBLN2P98095 1184 aa21.09■□□□□ 0.97
RBPMS-208ENST00000519657 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.97
RBPMS-208ENST00000519657 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
RBPMS-208ENST00000519657 PBRM1Q86U86 1689 aa21.07■□□□□ 0.96
RBPMS-208ENST00000519657 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
RBPMS-208ENST00000519657 CLASP1Q7Z460 1538 aa21.06■□□□□ 0.96
RBPMS-208ENST00000519657 SYNJ1O43426 1573 aa21.05■□□□□ 0.96
RBPMS-208ENST00000519657 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
RBPMS-208ENST00000519657 CHMP7Q8WUX9 453 aaPredicted RBP21.01■□□□□ 0.95
RBPMS-208ENST00000519657 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
RBPMS-208ENST00000519657 CYB5RLQ6IPT4 315 aa20.94■□□□□ 0.94
RBPMS-208ENST00000519657 ADAMTS12P58397 1594 aa20.9■□□□□ 0.94
RBPMS-208ENST00000519657 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
RBPMS-208ENST00000519657 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
RBPMS-208ENST00000519657 FHAD1B1AJZ9 1412 aa20.84■□□□□ 0.93
RBPMS-208ENST00000519657 NUP160Q12769 1436 aa20.84■□□□□ 0.93
RBPMS-208ENST00000519657 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
RBPMS-208ENST00000519657 SHROOM2Q13796 1616 aa20.74■□□□□ 0.91
RBPMS-208ENST00000519657 ERCC6L2Q5T890 1561 aa20.72■□□□□ 0.91
RBPMS-208ENST00000519657 IGF1RP08069 1367 aa20.63■□□□□ 0.89
RBPMS-208ENST00000519657 KIF27Q86VH2 1401 aa20.62■□□□□ 0.89
RBPMS-208ENST00000519657 RUSC2Q8N2Y8 1516 aa20.61■□□□□ 0.89
RBPMS-208ENST00000519657 TRHP20396 242 aaPredicted RBP20.59■□□□□ 0.89
RBPMS-208ENST00000519657 CUL7Q14999 1698 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms