RNA–Protein interactions for RNA: ENST00000519653.5

PSD3-210, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 5

Gene PSD3, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-210ENST00000519653 NISCHQ9Y2I1 1504 aa33.5■■■□□ 2.95
PSD3-210ENST00000519653 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
PSD3-210ENST00000519653 ABCC9O60706 1549 aa29.71■■■□□ 2.35
PSD3-210ENST00000519653 RB1CC1Q8TDY2 1594 aa28.44■■■□□ 2.14
PSD3-210ENST00000519653 NACADO15069 1562 aa28.29■■■□□ 2.12
PSD3-210ENST00000519653 DCAF8L2P0C7V8 631 aa28.17■■■□□ 2.1
PSD3-210ENST00000519653 MYO15BQ96JP2 1530 aa27.99■■■□□ 2.07
PSD3-210ENST00000519653 ZCCHC6Q5VYS8 1495 aaKnown RBP27.83■■■□□ 2.05
PSD3-210ENST00000519653 UNC13AQ9UPW8 1703 aa27.73■■■□□ 2.03
PSD3-210ENST00000519653 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
PSD3-210ENST00000519653 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.02
PSD3-210ENST00000519653 DNAJC5BQ9UF47 199 aa27.57■■■□□ 2
PSD3-210ENST00000519653 BICRAQ9NZM4 1560 aa27.53■■■□□ 2
PSD3-210ENST00000519653 SCRIBQ14160 1630 aa27.33■■□□□ 1.97
PSD3-210ENST00000519653 SHROOM4Q9ULL8 1493 aa27.28■■□□□ 1.96
PSD3-210ENST00000519653 EIF4G1Q04637 1599 aaKnown RBP26.88■■□□□ 1.89
PSD3-210ENST00000519653 CC2D2AQ9P2K1 1620 aa26.87■■□□□ 1.89
PSD3-210ENST00000519653 CECR2Q9BXF3 1484 aa26.76■■□□□ 1.87
PSD3-210ENST00000519653 SMARCA4P51532 1647 aa26.1■■□□□ 1.77
PSD3-210ENST00000519653 NCAPD3P42695 1498 aa26.09■■□□□ 1.77
PSD3-210ENST00000519653 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
PSD3-210ENST00000519653 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
PSD3-210ENST00000519653 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
PSD3-210ENST00000519653 HMGXB3Q12766 1538 aa25.95■■□□□ 1.74
PSD3-210ENST00000519653 PEG3Q9GZU2 1588 aa25.84■■□□□ 1.73
PSD3-210ENST00000519653 BAZ1BQ9UIG0 1483 aaKnown RBP25.84■■□□□ 1.73
PSD3-210ENST00000519653 MROH2BQ7Z745 1585 aa25.8■■□□□ 1.72
PSD3-210ENST00000519653 ERCC6Q03468 1493 aa25.69■■□□□ 1.7
PSD3-210ENST00000519653 NESP48681 1621 aa25.57■■□□□ 1.68
PSD3-210ENST00000519653 CUX2O14529 1486 aa25.55■■□□□ 1.68
PSD3-210ENST00000519653 WIZO95785 1651 aa25.51■■□□□ 1.67
PSD3-210ENST00000519653 LAMC3Q9Y6N6 1575 aa25.5■■□□□ 1.67
PSD3-210ENST00000519653 RSF1Q96T23 1441 aaPredicted RBP25.36■■□□□ 1.65
PSD3-210ENST00000519653 PDS5BQ9NTI5 1447 aa25.35■■□□□ 1.65
PSD3-210ENST00000519653 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
PSD3-210ENST00000519653 THOC2Q8NI27 1593 aaKnown RBP25.3■■□□□ 1.64
PSD3-210ENST00000519653 KIF21AQ7Z4S6 1674 aa25.28■■□□□ 1.64
PSD3-210ENST00000519653 TOP2AP11388 1531 aaKnown RBP25.24■■□□□ 1.63
PSD3-210ENST00000519653 DNAJC5Q9H3Z4 198 aa25.19■■□□□ 1.62
PSD3-210ENST00000519653 MRC2Q9UBG0 1479 aa25.1■■□□□ 1.61
PSD3-210ENST00000519653 CFTRP13569 1480 aa25.08■■□□□ 1.6
PSD3-210ENST00000519653 CEP164Q9UPV0 1460 aa25.07■■□□□ 1.6
PSD3-210ENST00000519653 FANCD2Q9BXW9 1451 aa25.03■■□□□ 1.6
PSD3-210ENST00000519653 WDR62O43379 1518 aa25.02■■□□□ 1.6
PSD3-210ENST00000519653 CCDC88BA6NC98 1476 aa24.91■■□□□ 1.58
PSD3-210ENST00000519653 PRDM2Q13029 1718 aa24.88■■□□□ 1.57
PSD3-210ENST00000519653 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
PSD3-210ENST00000519653 ABCC8Q09428 1581 aa24.59■■□□□ 1.53
PSD3-210ENST00000519653 TOPBP1Q92547 1522 aa24.58■■□□□ 1.53
PSD3-210ENST00000519653 IFT140Q96RY7 1462 aa24.55■■□□□ 1.52
PSD3-210ENST00000519653 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
PSD3-210ENST00000519653 SUPT5HO00267 1087 aaKnown RBP24.43■■□□□ 1.5
PSD3-210ENST00000519653 ZNF608Q9ULD9 1512 aaPredicted RBP24.43■■□□□ 1.5
PSD3-210ENST00000519653 OSCARQ8IYS5 282 aa24.4■■□□□ 1.5
PSD3-210ENST00000519653 EIF4G3O43432 1585 aaKnown RBP24.35■■□□□ 1.49
PSD3-210ENST00000519653 POLA1P09884 1462 aaPredicted RBP24.35■■□□□ 1.49
PSD3-210ENST00000519653 TARBP1Q13395 1621 aaKnown RBP24.33■■□□□ 1.49
PSD3-210ENST00000519653 SOGA1O94964 1423 aa24.25■■□□□ 1.47
PSD3-210ENST00000519653 AQRO60306 1485 aaKnown RBP eCLIP24.25■■□□□ 1.47
PSD3-210ENST00000519653 FGD5Q6ZNL6 1462 aa24.24■■□□□ 1.47
PSD3-210ENST00000519653 CUX1P39880 1505 aa24.24■■□□□ 1.47
PSD3-210ENST00000519653 RAD54L2Q9Y4B4 1467 aa24.23■■□□□ 1.47
PSD3-210ENST00000519653 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
PSD3-210ENST00000519653 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
PSD3-210ENST00000519653 TDRD9Q8NDG6 1382 aaKnown RBP24.15■■□□□ 1.46
PSD3-210ENST00000519653 CHD1O14646 1710 aa24.11■■□□□ 1.45
PSD3-210ENST00000519653 FBLN2P98095 1184 aa24.07■■□□□ 1.44
PSD3-210ENST00000519653 RIMBP3CA6NJZ7 1639 aa24.05■■□□□ 1.44
PSD3-210ENST00000519653 RIMBP3BA6NNM3 1639 aa24.05■■□□□ 1.44
PSD3-210ENST00000519653 RIMBP3Q9UFD9 1639 aa24.05■■□□□ 1.44
PSD3-210ENST00000519653 SNAPC4Q5SXM2 1469 aa24.05■■□□□ 1.44
PSD3-210ENST00000519653 GRIN2BQ13224 1484 aa24.02■■□□□ 1.44
PSD3-210ENST00000519653 MAGI1Q96QZ7 1491 aaPredicted RBP24.01■■□□□ 1.43
PSD3-210ENST00000519653 ARHGEF11O15085 1522 aa24■■□□□ 1.43
PSD3-210ENST00000519653 ABCA10Q8WWZ4 1543 aa23.98■■□□□ 1.43
PSD3-210ENST00000519653 GAPVD1Q14C86 1478 aa23.96■■□□□ 1.43
PSD3-210ENST00000519653 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.42
PSD3-210ENST00000519653 CHMP7Q8WUX9 453 aaPredicted RBP23.95■■□□□ 1.42
PSD3-210ENST00000519653 PBRM1Q86U86 1689 aa23.94■■□□□ 1.42
PSD3-210ENST00000519653 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
PSD3-210ENST00000519653 BIVM-ERCC5R4GMW8 1640 aa23.94■■□□□ 1.42
PSD3-210ENST00000519653 ABCA5Q8WWZ7 1642 aa23.92■■□□□ 1.42
PSD3-210ENST00000519653 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
PSD3-210ENST00000519653 SYNJ1O43426 1573 aa23.89■■□□□ 1.41
PSD3-210ENST00000519653 CLASP1Q7Z460 1538 aa23.84■■□□□ 1.41
PSD3-210ENST00000519653 CYB5RLQ6IPT4 315 aa23.8■■□□□ 1.4
PSD3-210ENST00000519653 ARAP1Q96P48 1450 aa23.78■■□□□ 1.4
PSD3-210ENST00000519653 ADAMTS12P58397 1594 aa23.73■■□□□ 1.39
PSD3-210ENST00000519653 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
PSD3-210ENST00000519653 ERICH3Q5RHP9 1530 aa23.7■■□□□ 1.38
PSD3-210ENST00000519653 FHAD1B1AJZ9 1412 aa23.67■■□□□ 1.38
PSD3-210ENST00000519653 NUP160Q12769 1436 aa23.61■■□□□ 1.37
PSD3-210ENST00000519653 CEP170Q5SW79 1584 aa23.6■■□□□ 1.37
PSD3-210ENST00000519653 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
PSD3-210ENST00000519653 TRHP20396 242 aaPredicted RBP23.49■■□□□ 1.35
PSD3-210ENST00000519653 SHROOM2Q13796 1616 aa23.48■■□□□ 1.35
PSD3-210ENST00000519653 ERCC6L2Q5T890 1561 aa23.45■■□□□ 1.34
PSD3-210ENST00000519653 CUL7Q14999 1698 aa23.42■■□□□ 1.34
PSD3-210ENST00000519653 IGF1RP08069 1367 aa23.4■■□□□ 1.34
PSD3-210ENST00000519653 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms