RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 NISCHQ9Y2I1 1504 aa15.66■□□□□ 0.1
IGKV3D-25-201ENST00000519599 CCDC180Q9P1Z9 1646 aa14.07□□□□□ -0.16
IGKV3D-25-201ENST00000519599 ABCC9O60706 1549 aa13.85□□□□□ -0.19
IGKV3D-25-201ENST00000519599 RB1CC1Q8TDY2 1594 aa13.24□□□□□ -0.29
IGKV3D-25-201ENST00000519599 NACADO15069 1562 aa13.2□□□□□ -0.3
IGKV3D-25-201ENST00000519599 UNC13AQ9UPW8 1703 aa13.17□□□□□ -0.3
IGKV3D-25-201ENST00000519599 MYO15BQ96JP2 1530 aa13.08□□□□□ -0.32
IGKV3D-25-201ENST00000519599 ZCCHC6Q5VYS8 1495 aaKnown RBP13.03□□□□□ -0.32
IGKV3D-25-201ENST00000519599 BICRAQ9NZM4 1560 aa12.99□□□□□ -0.33
IGKV3D-25-201ENST00000519599 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
IGKV3D-25-201ENST00000519599 DCAF1Q9Y4B6 1507 aa12.96□□□□□ -0.33
IGKV3D-25-201ENST00000519599 DCAF8L2P0C7V8 631 aa12.93□□□□□ -0.34
IGKV3D-25-201ENST00000519599 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
IGKV3D-25-201ENST00000519599 SCRIBQ14160 1630 aa12.77□□□□□ -0.37
IGKV3D-25-201ENST00000519599 SHROOM4Q9ULL8 1493 aa12.7□□□□□ -0.38
IGKV3D-25-201ENST00000519599 CC2D2AQ9P2K1 1620 aa12.59□□□□□ -0.39
IGKV3D-25-201ENST00000519599 EIF4G1Q04637 1599 aaKnown RBP12.59□□□□□ -0.39
IGKV3D-25-201ENST00000519599 CECR2Q9BXF3 1484 aa12.46□□□□□ -0.41
IGKV3D-25-201ENST00000519599 SMARCA4P51532 1647 aa12.22□□□□□ -0.45
IGKV3D-25-201ENST00000519599 NCAPD3P42695 1498 aa12.18□□□□□ -0.46
IGKV3D-25-201ENST00000519599 ATAD2BQ9ULI0 1458 aa12.16□□□□□ -0.46
IGKV3D-25-201ENST00000519599 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
IGKV3D-25-201ENST00000519599 HMGXB3Q12766 1538 aa12.12□□□□□ -0.47
IGKV3D-25-201ENST00000519599 BAZ1AQ9NRL2 1556 aaPredicted RBP12.11□□□□□ -0.47
IGKV3D-25-201ENST00000519599 SMARCA2P51531 1590 aa12.1□□□□□ -0.47
IGKV3D-25-201ENST00000519599 MROH2BQ7Z745 1585 aa12.09□□□□□ -0.47
IGKV3D-25-201ENST00000519599 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
IGKV3D-25-201ENST00000519599 NESP48681 1621 aa12□□□□□ -0.49
IGKV3D-25-201ENST00000519599 WIZO95785 1651 aa11.98□□□□□ -0.49
IGKV3D-25-201ENST00000519599 THOC2Q8NI27 1593 aaKnown RBP11.92□□□□□ -0.5
IGKV3D-25-201ENST00000519599 KIF21AQ7Z4S6 1674 aa11.91□□□□□ -0.5
IGKV3D-25-201ENST00000519599 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
IGKV3D-25-201ENST00000519599 CUX2O14529 1486 aa11.89□□□□□ -0.51
IGKV3D-25-201ENST00000519599 ERCC6Q03468 1493 aa11.87□□□□□ -0.51
IGKV3D-25-201ENST00000519599 RSF1Q96T23 1441 aaPredicted RBP11.84□□□□□ -0.51
IGKV3D-25-201ENST00000519599 TOP2AP11388 1531 aaKnown RBP11.78□□□□□ -0.52
IGKV3D-25-201ENST00000519599 CADPSQ9ULU8 1353 aa11.77□□□□□ -0.53
IGKV3D-25-201ENST00000519599 DNAJC5Q9H3Z4 198 aa11.75□□□□□ -0.53
IGKV3D-25-201ENST00000519599 PRDM2Q13029 1718 aa11.74□□□□□ -0.53
IGKV3D-25-201ENST00000519599 WDR62O43379 1518 aa11.72□□□□□ -0.53
IGKV3D-25-201ENST00000519599 PDS5BQ9NTI5 1447 aa11.72□□□□□ -0.53
IGKV3D-25-201ENST00000519599 CFTRP13569 1480 aa11.7□□□□□ -0.54
IGKV3D-25-201ENST00000519599 MRC2Q9UBG0 1479 aa11.69□□□□□ -0.54
IGKV3D-25-201ENST00000519599 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.54
IGKV3D-25-201ENST00000519599 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
IGKV3D-25-201ENST00000519599 CCDC88BA6NC98 1476 aa11.63□□□□□ -0.55
IGKV3D-25-201ENST00000519599 URB2Q14146 1524 aaKnown RBP11.61□□□□□ -0.55
IGKV3D-25-201ENST00000519599 TOPBP1Q92547 1522 aa11.48□□□□□ -0.57
IGKV3D-25-201ENST00000519599 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
IGKV3D-25-201ENST00000519599 ZNF608Q9ULD9 1512 aaPredicted RBP11.45□□□□□ -0.58
IGKV3D-25-201ENST00000519599 TARBP1Q13395 1621 aaKnown RBP11.44□□□□□ -0.58
IGKV3D-25-201ENST00000519599 EIF4G3O43432 1585 aaKnown RBP11.41□□□□□ -0.58
IGKV3D-25-201ENST00000519599 IFT140Q96RY7 1462 aa11.4□□□□□ -0.58
IGKV3D-25-201ENST00000519599 ABCC8Q09428 1581 aa11.38□□□□□ -0.59
IGKV3D-25-201ENST00000519599 POLA1P09884 1462 aaPredicted RBP11.37□□□□□ -0.59
IGKV3D-25-201ENST00000519599 CUX1P39880 1505 aa11.35□□□□□ -0.59
IGKV3D-25-201ENST00000519599 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
IGKV3D-25-201ENST00000519599 CHD1O14646 1710 aa11.35□□□□□ -0.59
IGKV3D-25-201ENST00000519599 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
IGKV3D-25-201ENST00000519599 AQRO60306 1485 aaKnown RBP eCLIP11.3□□□□□ -0.6
IGKV3D-25-201ENST00000519599 FGD5Q6ZNL6 1462 aa11.3□□□□□ -0.6
IGKV3D-25-201ENST00000519599 RIMBP3CA6NJZ7 1639 aa11.29□□□□□ -0.6
IGKV3D-25-201ENST00000519599 RIMBP3BA6NNM3 1639 aa11.29□□□□□ -0.6
IGKV3D-25-201ENST00000519599 RIMBP3Q9UFD9 1639 aa11.29□□□□□ -0.6
IGKV3D-25-201ENST00000519599 OSCARQ8IYS5 282 aa11.27□□□□□ -0.61
IGKV3D-25-201ENST00000519599 PBRM1Q86U86 1689 aa11.25□□□□□ -0.61
IGKV3D-25-201ENST00000519599 SOGA1O94964 1423 aa11.24□□□□□ -0.61
IGKV3D-25-201ENST00000519599 BIVM-ERCC5R4GMW8 1640 aa11.24□□□□□ -0.61
IGKV3D-25-201ENST00000519599 ABCA5Q8WWZ7 1642 aa11.23□□□□□ -0.61
IGKV3D-25-201ENST00000519599 SUPT5HO00267 1087 aaKnown RBP11.22□□□□□ -0.61
IGKV3D-25-201ENST00000519599 ARHGEF11O15085 1522 aa11.22□□□□□ -0.61
IGKV3D-25-201ENST00000519599 TDRD9Q8NDG6 1382 aaKnown RBP11.22□□□□□ -0.61
IGKV3D-25-201ENST00000519599 SYNJ1O43426 1573 aa11.2□□□□□ -0.62
IGKV3D-25-201ENST00000519599 SNAPC4Q5SXM2 1469 aa11.2□□□□□ -0.62
IGKV3D-25-201ENST00000519599 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
IGKV3D-25-201ENST00000519599 TOP2BQ02880 1626 aa11.19□□□□□ -0.62
IGKV3D-25-201ENST00000519599 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
IGKV3D-25-201ENST00000519599 ABCA10Q8WWZ4 1543 aa11.18□□□□□ -0.62
IGKV3D-25-201ENST00000519599 MAGI1Q96QZ7 1491 aaPredicted RBP11.16□□□□□ -0.62
IGKV3D-25-201ENST00000519599 GRIN2BQ13224 1484 aa11.15□□□□□ -0.62
IGKV3D-25-201ENST00000519599 ARAP1Q96P48 1450 aa11.14□□□□□ -0.63
IGKV3D-25-201ENST00000519599 GAPVD1Q14C86 1478 aa11.13□□□□□ -0.63
IGKV3D-25-201ENST00000519599 SYNJ2O15056 1496 aa11.12□□□□□ -0.63
IGKV3D-25-201ENST00000519599 ADAMTS12P58397 1594 aa11.11□□□□□ -0.63
IGKV3D-25-201ENST00000519599 WRNQ14191 1432 aaPredicted RBP eCLIP11.1□□□□□ -0.63
IGKV3D-25-201ENST00000519599 CEP170Q5SW79 1584 aa11.07□□□□□ -0.64
IGKV3D-25-201ENST00000519599 FBLN2P98095 1184 aa11.05□□□□□ -0.64
IGKV3D-25-201ENST00000519599 ERCC6L2Q5T890 1561 aa11.05□□□□□ -0.64
IGKV3D-25-201ENST00000519599 GRIN2AQ12879 1464 aa11.05□□□□□ -0.64
IGKV3D-25-201ENST00000519599 SHROOM2Q13796 1616 aa11.04□□□□□ -0.64
IGKV3D-25-201ENST00000519599 ERICH3Q5RHP9 1530 aa11.04□□□□□ -0.64
IGKV3D-25-201ENST00000519599 NUP160Q12769 1436 aa11.03□□□□□ -0.64
IGKV3D-25-201ENST00000519599 CYB5RLQ6IPT4 315 aa11.01□□□□□ -0.65
IGKV3D-25-201ENST00000519599 CHMP7Q8WUX9 453 aaPredicted RBP11.01□□□□□ -0.65
IGKV3D-25-201ENST00000519599 FHAD1B1AJZ9 1412 aa10.98□□□□□ -0.65
IGKV3D-25-201ENST00000519599 RUSC2Q8N2Y8 1516 aa10.97□□□□□ -0.65
IGKV3D-25-201ENST00000519599 CUL7Q14999 1698 aa10.92□□□□□ -0.66
IGKV3D-25-201ENST00000519599 IGF1RP08069 1367 aa10.89□□□□□ -0.67
IGKV3D-25-201ENST00000519599 KIF13AQ9H1H9 1805 aa10.88□□□□□ -0.67
IGKV3D-25-201ENST00000519599 KIF27Q86VH2 1401 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms