RNA–Protein interactions for RNA: ENST00000519456.1

RASGEF1C-203, Transcript of RasGEF domain family member 1C, humanhuman

TSL 3

Gene RASGEF1C, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1C-203ENST00000519456 NISCHQ9Y2I1 1504 aa27.55■■■□□ 2
RASGEF1C-203ENST00000519456 CCDC180Q9P1Z9 1646 aa24.7■■□□□ 1.54
RASGEF1C-203ENST00000519456 ABCC9O60706 1549 aa24.38■■□□□ 1.49
RASGEF1C-203ENST00000519456 RB1CC1Q8TDY2 1594 aa23.38■■□□□ 1.33
RASGEF1C-203ENST00000519456 NACADO15069 1562 aa23.3■■□□□ 1.32
RASGEF1C-203ENST00000519456 MYO15BQ96JP2 1530 aa23.12■■□□□ 1.29
RASGEF1C-203ENST00000519456 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
RASGEF1C-203ENST00000519456 ZCCHC6Q5VYS8 1495 aaKnown RBP22.9■■□□□ 1.26
RASGEF1C-203ENST00000519456 DCAF1Q9Y4B6 1507 aa22.86■■□□□ 1.25
RASGEF1C-203ENST00000519456 UNC13AQ9UPW8 1703 aa22.83■■□□□ 1.25
RASGEF1C-203ENST00000519456 DNAJC5BQ9UF47 199 aa22.74■■□□□ 1.23
RASGEF1C-203ENST00000519456 BICRAQ9NZM4 1560 aa22.71■■□□□ 1.23
RASGEF1C-203ENST00000519456 PABPN1Q86U42 306 aaKnown RBP eCLIP22.68■■□□□ 1.22
RASGEF1C-203ENST00000519456 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
RASGEF1C-203ENST00000519456 SCRIBQ14160 1630 aa22.39■■□□□ 1.18
RASGEF1C-203ENST00000519456 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
RASGEF1C-203ENST00000519456 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
RASGEF1C-203ENST00000519456 CECR2Q9BXF3 1484 aa22■■□□□ 1.11
RASGEF1C-203ENST00000519456 NCAPD3P42695 1498 aa21.51■■□□□ 1.03
RASGEF1C-203ENST00000519456 SMARCA4P51532 1647 aa21.45■■□□□ 1.02
RASGEF1C-203ENST00000519456 ATAD2BQ9ULI0 1458 aa21.43■■□□□ 1.02
RASGEF1C-203ENST00000519456 SMARCA2P51531 1590 aa21.39■■□□□ 1.01
RASGEF1C-203ENST00000519456 BAZ1AQ9NRL2 1556 aaPredicted RBP21.38■■□□□ 1.01
RASGEF1C-203ENST00000519456 HMGXB3Q12766 1538 aa21.38■■□□□ 1.01
RASGEF1C-203ENST00000519456 PEG3Q9GZU2 1588 aa21.32■■□□□ 1
RASGEF1C-203ENST00000519456 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
RASGEF1C-203ENST00000519456 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
RASGEF1C-203ENST00000519456 CUX2O14529 1486 aa21.07■□□□□ 0.96
RASGEF1C-203ENST00000519456 ERCC6Q03468 1493 aa21.04■□□□□ 0.96
RASGEF1C-203ENST00000519456 NESP48681 1621 aa21.01■□□□□ 0.95
RASGEF1C-203ENST00000519456 LAMC3Q9Y6N6 1575 aa20.97■□□□□ 0.95
RASGEF1C-203ENST00000519456 WIZO95785 1651 aa20.93■□□□□ 0.94
RASGEF1C-203ENST00000519456 THOC2Q8NI27 1593 aaKnown RBP20.85■□□□□ 0.93
RASGEF1C-203ENST00000519456 RSF1Q96T23 1441 aaPredicted RBP20.83■□□□□ 0.93
RASGEF1C-203ENST00000519456 PDS5BQ9NTI5 1447 aa20.82■□□□□ 0.92
RASGEF1C-203ENST00000519456 CADPSQ9ULU8 1353 aa20.82■□□□□ 0.92
RASGEF1C-203ENST00000519456 DNAJC5Q9H3Z4 198 aa20.8■□□□□ 0.92
RASGEF1C-203ENST00000519456 KIF21AQ7Z4S6 1674 aa20.77■□□□□ 0.92
RASGEF1C-203ENST00000519456 TOP2AP11388 1531 aaKnown RBP20.73■□□□□ 0.91
RASGEF1C-203ENST00000519456 CFTRP13569 1480 aa20.64■□□□□ 0.89
RASGEF1C-203ENST00000519456 MRC2Q9UBG0 1479 aa20.63■□□□□ 0.89
RASGEF1C-203ENST00000519456 WDR62O43379 1518 aa20.62■□□□□ 0.89
RASGEF1C-203ENST00000519456 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
RASGEF1C-203ENST00000519456 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
RASGEF1C-203ENST00000519456 CCDC88BA6NC98 1476 aa20.45■□□□□ 0.86
RASGEF1C-203ENST00000519456 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
RASGEF1C-203ENST00000519456 URB2Q14146 1524 aaKnown RBP20.39■□□□□ 0.85
RASGEF1C-203ENST00000519456 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
RASGEF1C-203ENST00000519456 TOPBP1Q92547 1522 aa20.2■□□□□ 0.82
RASGEF1C-203ENST00000519456 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
RASGEF1C-203ENST00000519456 DNMBPQ6XZF7 1577 aa20.16■□□□□ 0.82
RASGEF1C-203ENST00000519456 ZNF608Q9ULD9 1512 aaPredicted RBP20.08■□□□□ 0.81
RASGEF1C-203ENST00000519456 OSCARQ8IYS5 282 aa20.04■□□□□ 0.8
RASGEF1C-203ENST00000519456 TARBP1Q13395 1621 aaKnown RBP20.03■□□□□ 0.8
RASGEF1C-203ENST00000519456 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
RASGEF1C-203ENST00000519456 EIF4G3O43432 1585 aaKnown RBP20■□□□□ 0.79
RASGEF1C-203ENST00000519456 WDR97A6NE52 1622 aa19.92■□□□□ 0.78
RASGEF1C-203ENST00000519456 CUX1P39880 1505 aa19.91■□□□□ 0.78
RASGEF1C-203ENST00000519456 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.78
RASGEF1C-203ENST00000519456 FGD5Q6ZNL6 1462 aa19.89■□□□□ 0.77
RASGEF1C-203ENST00000519456 RAD54L2Q9Y4B4 1467 aa19.88■□□□□ 0.77
RASGEF1C-203ENST00000519456 SOGA1O94964 1423 aa19.88■□□□□ 0.77
RASGEF1C-203ENST00000519456 SUPT5HO00267 1087 aaKnown RBP19.84■□□□□ 0.77
RASGEF1C-203ENST00000519456 CHD1O14646 1710 aa19.8■□□□□ 0.76
RASGEF1C-203ENST00000519456 TRIM41Q8WV44 630 aa19.8■□□□□ 0.76
RASGEF1C-203ENST00000519456 RIMBP3CA6NJZ7 1639 aa19.79■□□□□ 0.76
RASGEF1C-203ENST00000519456 RIMBP3BA6NNM3 1639 aa19.79■□□□□ 0.76
RASGEF1C-203ENST00000519456 TDRD9Q8NDG6 1382 aaKnown RBP19.79■□□□□ 0.76
RASGEF1C-203ENST00000519456 RIMBP3Q9UFD9 1639 aa19.79■□□□□ 0.76
RASGEF1C-203ENST00000519456 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
RASGEF1C-203ENST00000519456 MAGI1Q96QZ7 1491 aaPredicted RBP19.74■□□□□ 0.75
RASGEF1C-203ENST00000519456 SNAPC4Q5SXM2 1469 aa19.73■□□□□ 0.75
RASGEF1C-203ENST00000519456 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
RASGEF1C-203ENST00000519456 ABCA10Q8WWZ4 1543 aa19.72■□□□□ 0.75
RASGEF1C-203ENST00000519456 ABCA5Q8WWZ7 1642 aa19.68■□□□□ 0.74
RASGEF1C-203ENST00000519456 BIVM-ERCC5R4GMW8 1640 aa19.67■□□□□ 0.74
RASGEF1C-203ENST00000519456 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
RASGEF1C-203ENST00000519456 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
RASGEF1C-203ENST00000519456 SYNJ2O15056 1496 aa19.66■□□□□ 0.74
RASGEF1C-203ENST00000519456 CLASP1Q7Z460 1538 aa19.65■□□□□ 0.74
RASGEF1C-203ENST00000519456 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
RASGEF1C-203ENST00000519456 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
RASGEF1C-203ENST00000519456 FBLN2P98095 1184 aa19.63■□□□□ 0.73
RASGEF1C-203ENST00000519456 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
RASGEF1C-203ENST00000519456 CHMP7Q8WUX9 453 aaPredicted RBP19.59■□□□□ 0.73
RASGEF1C-203ENST00000519456 ARAP1Q96P48 1450 aa19.58■□□□□ 0.72
RASGEF1C-203ENST00000519456 ADAMTS12P58397 1594 aa19.5■□□□□ 0.71
RASGEF1C-203ENST00000519456 CYB5RLQ6IPT4 315 aa19.49■□□□□ 0.71
RASGEF1C-203ENST00000519456 ERICH3Q5RHP9 1530 aa19.48■□□□□ 0.71
RASGEF1C-203ENST00000519456 GRIN2AQ12879 1464 aa19.48■□□□□ 0.71
RASGEF1C-203ENST00000519456 FHAD1B1AJZ9 1412 aa19.44■□□□□ 0.7
RASGEF1C-203ENST00000519456 NUP160Q12769 1436 aa19.44■□□□□ 0.7
RASGEF1C-203ENST00000519456 CEP170Q5SW79 1584 aa19.39■□□□□ 0.69
RASGEF1C-203ENST00000519456 SHROOM2Q13796 1616 aa19.35■□□□□ 0.69
RASGEF1C-203ENST00000519456 ERCC6L2Q5T890 1561 aa19.28■□□□□ 0.68
RASGEF1C-203ENST00000519456 KIF27Q86VH2 1401 aa19.25■□□□□ 0.67
RASGEF1C-203ENST00000519456 IGF1RP08069 1367 aa19.22■□□□□ 0.67
RASGEF1C-203ENST00000519456 RUSC2Q8N2Y8 1516 aa19.22■□□□□ 0.67
RASGEF1C-203ENST00000519456 CUL7Q14999 1698 aa19.22■□□□□ 0.67
RASGEF1C-203ENST00000519456 TRHP20396 242 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms