RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 NISCHQ9Y2I1 1504 aa52.59■■■■■ 6.01
ARFGEF1-206ENST00000519436 CCDC180Q9P1Z9 1646 aa46.84■■■■■ 5.09
ARFGEF1-206ENST00000519436 ABCC9O60706 1549 aa46.5■■■■■ 5.03
ARFGEF1-206ENST00000519436 RB1CC1Q8TDY2 1594 aa44.41■■■■■ 4.7
ARFGEF1-206ENST00000519436 NACADO15069 1562 aa44.27■■■■■ 4.68
ARFGEF1-206ENST00000519436 DCAF8L2P0C7V8 631 aa44.19■■■■■ 4.66
ARFGEF1-206ENST00000519436 MYO15BQ96JP2 1530 aa43.89■■■■■ 4.62
ARFGEF1-206ENST00000519436 ZCCHC6Q5VYS8 1495 aaKnown RBP43.67■■■■■ 4.58
ARFGEF1-206ENST00000519436 DCAF1Q9Y4B6 1507 aa43.48■■■■■ 4.55
ARFGEF1-206ENST00000519436 PABPN1Q86U42 306 aaKnown RBP eCLIP43.46■■■■■ 4.55
ARFGEF1-206ENST00000519436 DNAJC5BQ9UF47 199 aa43.39■■■■■ 4.54
ARFGEF1-206ENST00000519436 UNC13AQ9UPW8 1703 aa43.32■■■■■ 4.53
ARFGEF1-206ENST00000519436 BICRAQ9NZM4 1560 aa43.18■■■■■ 4.5
ARFGEF1-206ENST00000519436 SCRIBQ14160 1630 aa42.73■■■■■ 4.43
ARFGEF1-206ENST00000519436 SHROOM4Q9ULL8 1493 aa42.62■■■■■ 4.41
ARFGEF1-206ENST00000519436 EIF4G1Q04637 1599 aaKnown RBP42.05■■■■■ 4.32
ARFGEF1-206ENST00000519436 CC2D2AQ9P2K1 1620 aa42■■■■■ 4.31
ARFGEF1-206ENST00000519436 CECR2Q9BXF3 1484 aa41.86■■■■■ 4.29
ARFGEF1-206ENST00000519436 NCAPD3P42695 1498 aa40.96■■■■■ 4.15
ARFGEF1-206ENST00000519436 ATAD2BQ9ULI0 1458 aa40.88■■■■■ 4.13
ARFGEF1-206ENST00000519436 SMARCA4P51532 1647 aa40.85■■■■■ 4.13
ARFGEF1-206ENST00000519436 BAZ1AQ9NRL2 1556 aaPredicted RBP40.74■■■■■ 4.11
ARFGEF1-206ENST00000519436 SMARCA2P51531 1590 aa40.7■■■■■ 4.11
ARFGEF1-206ENST00000519436 HMGXB3Q12766 1538 aa40.59■■■■■ 4.09
ARFGEF1-206ENST00000519436 MROH2BQ7Z745 1585 aa40.53■■■■■ 4.08
ARFGEF1-206ENST00000519436 PEG3Q9GZU2 1588 aa40.52■■■■■ 4.08
ARFGEF1-206ENST00000519436 BAZ1BQ9UIG0 1483 aaKnown RBP40.43■■■■■ 4.06
ARFGEF1-206ENST00000519436 NESP48681 1621 aa40.11■■■■■ 4.01
ARFGEF1-206ENST00000519436 ERCC6Q03468 1493 aa40.07■■■■■ 4
ARFGEF1-206ENST00000519436 WIZO95785 1651 aa39.99■■■■□ 3.99
ARFGEF1-206ENST00000519436 RSF1Q96T23 1441 aaPredicted RBP39.91■■■■□ 3.98
ARFGEF1-206ENST00000519436 CUX2O14529 1486 aa39.88■■■■□ 3.98
ARFGEF1-206ENST00000519436 LAMC3Q9Y6N6 1575 aa39.84■■■■□ 3.97
ARFGEF1-206ENST00000519436 CADPSQ9ULU8 1353 aa39.73■■■■□ 3.95
ARFGEF1-206ENST00000519436 PDS5BQ9NTI5 1447 aa39.65■■■■□ 3.94
ARFGEF1-206ENST00000519436 TOP2AP11388 1531 aaKnown RBP39.54■■■■□ 3.92
ARFGEF1-206ENST00000519436 THOC2Q8NI27 1593 aaKnown RBP39.53■■■■□ 3.92
ARFGEF1-206ENST00000519436 DNAJC5Q9H3Z4 198 aa39.47■■■■□ 3.91
ARFGEF1-206ENST00000519436 KIF21AQ7Z4S6 1674 aa39.46■■■■□ 3.91
ARFGEF1-206ENST00000519436 CFTRP13569 1480 aa39.37■■■■□ 3.89
ARFGEF1-206ENST00000519436 MRC2Q9UBG0 1479 aa39.26■■■■□ 3.88
ARFGEF1-206ENST00000519436 FANCD2Q9BXW9 1451 aa39.22■■■■□ 3.87
ARFGEF1-206ENST00000519436 CCDC88BA6NC98 1476 aa39.17■■■■□ 3.86
ARFGEF1-206ENST00000519436 CEP164Q9UPV0 1460 aa39.17■■■■□ 3.86
ARFGEF1-206ENST00000519436 WDR62O43379 1518 aa39.14■■■■□ 3.86
ARFGEF1-206ENST00000519436 URB2Q14146 1524 aaKnown RBP38.88■■■■□ 3.81
ARFGEF1-206ENST00000519436 PRDM2Q13029 1718 aa38.75■■■■□ 3.79
ARFGEF1-206ENST00000519436 TOPBP1Q92547 1522 aa38.53■■■■□ 3.76
ARFGEF1-206ENST00000519436 ABCC8Q09428 1581 aa38.47■■■■□ 3.75
ARFGEF1-206ENST00000519436 SUPT5HO00267 1087 aaKnown RBP38.46■■■■□ 3.75
ARFGEF1-206ENST00000519436 IFT140Q96RY7 1462 aa38.41■■■■□ 3.74
ARFGEF1-206ENST00000519436 DNMBPQ6XZF7 1577 aa38.38■■■■□ 3.73
ARFGEF1-206ENST00000519436 ZNF608Q9ULD9 1512 aaPredicted RBP38.33■■■■□ 3.73
ARFGEF1-206ENST00000519436 OSCARQ8IYS5 282 aa38.23■■■■□ 3.71
ARFGEF1-206ENST00000519436 POLA1P09884 1462 aaPredicted RBP38.17■■■■□ 3.7
ARFGEF1-206ENST00000519436 TARBP1Q13395 1621 aaKnown RBP38.12■■■■□ 3.69
ARFGEF1-206ENST00000519436 AQRO60306 1485 aaKnown RBP eCLIP38.06■■■■□ 3.689e-7■□□□□ 8.2
ARFGEF1-206ENST00000519436 RAD54L2Q9Y4B4 1467 aa38.04■■■■□ 3.68
ARFGEF1-206ENST00000519436 SOGA1O94964 1423 aa38.04■■■■□ 3.68
ARFGEF1-206ENST00000519436 CUX1P39880 1505 aa38.03■■■■□ 3.68
ARFGEF1-206ENST00000519436 EIF4G3O43432 1585 aaKnown RBP38.02■■■■□ 3.68
ARFGEF1-206ENST00000519436 FGD5Q6ZNL6 1462 aa37.98■■■■□ 3.67
ARFGEF1-206ENST00000519436 TDRD9Q8NDG6 1382 aaKnown RBP37.92■■■■□ 3.66
ARFGEF1-206ENST00000519436 TRIM41Q8WV44 630 aa37.81■■■■□ 3.64
ARFGEF1-206ENST00000519436 WDR97A6NE52 1622 aa37.72■■■■□ 3.63
ARFGEF1-206ENST00000519436 FBLN2P98095 1184 aa37.67■■■■□ 3.62
ARFGEF1-206ENST00000519436 GRIN2BQ13224 1484 aa37.62■■■■□ 3.61
ARFGEF1-206ENST00000519436 SNAPC4Q5SXM2 1469 aa37.62■■■■□ 3.61
ARFGEF1-206ENST00000519436 ABCA10Q8WWZ4 1543 aa37.61■■■■□ 3.61
ARFGEF1-206ENST00000519436 CHD1O14646 1710 aa37.6■■■■□ 3.61
ARFGEF1-206ENST00000519436 WRNQ14191 1432 aaPredicted RBP eCLIP37.59■■■■□ 3.61
ARFGEF1-206ENST00000519436 GAPVD1Q14C86 1478 aa37.55■■■■□ 3.6
ARFGEF1-206ENST00000519436 MAGI1Q96QZ7 1491 aaPredicted RBP37.55■■■■□ 3.6
ARFGEF1-206ENST00000519436 RIMBP3CA6NJZ7 1639 aa37.54■■■■□ 3.6
ARFGEF1-206ENST00000519436 RIMBP3BA6NNM3 1639 aa37.54■■■■□ 3.6
ARFGEF1-206ENST00000519436 RIMBP3Q9UFD9 1639 aa37.54■■■■□ 3.6
ARFGEF1-206ENST00000519436 ARHGEF11O15085 1522 aa37.52■■■■□ 3.6
ARFGEF1-206ENST00000519436 CHMP7Q8WUX9 453 aaPredicted RBP37.52■■■■□ 3.6
ARFGEF1-206ENST00000519436 TOP2BQ02880 1626 aa37.5■■■■□ 3.59
ARFGEF1-206ENST00000519436 SYNJ1O43426 1573 aa37.48■■■■□ 3.59
ARFGEF1-206ENST00000519436 BIVM-ERCC5R4GMW8 1640 aa37.47■■■■□ 3.59
ARFGEF1-206ENST00000519436 SYNJ2O15056 1496 aa37.44■■■■□ 3.58
ARFGEF1-206ENST00000519436 ABCA5Q8WWZ7 1642 aa37.43■■■■□ 3.58
ARFGEF1-206ENST00000519436 PBRM1Q86U86 1689 aa37.34■■■■□ 3.57
ARFGEF1-206ENST00000519436 CLASP1Q7Z460 1538 aa37.31■■■■□ 3.56
ARFGEF1-206ENST00000519436 CYB5RLQ6IPT4 315 aa37.29■■■■□ 3.56
ARFGEF1-206ENST00000519436 ARAP1Q96P48 1450 aa37.21■■■■□ 3.55
ARFGEF1-206ENST00000519436 GRIN2AQ12879 1464 aa37.12■■■■□ 3.53
ARFGEF1-206ENST00000519436 FHAD1B1AJZ9 1412 aa37.11■■■■□ 3.53
ARFGEF1-206ENST00000519436 ERICH3Q5RHP9 1530 aa37.1■■■■□ 3.53
ARFGEF1-206ENST00000519436 ADAMTS12P58397 1594 aa37.1■■■■□ 3.53
ARFGEF1-206ENST00000519436 NUP160Q12769 1436 aa37.03■■■■□ 3.52
ARFGEF1-206ENST00000519436 CEP170Q5SW79 1584 aa36.95■■■■□ 3.51
ARFGEF1-206ENST00000519436 IGF1RP08069 1367 aa36.88■■■■□ 3.49
ARFGEF1-206ENST00000519436 KIF27Q86VH2 1401 aa36.85■■■■□ 3.49
ARFGEF1-206ENST00000519436 ERCC6L2Q5T890 1561 aa36.78■■■■□ 3.48
ARFGEF1-206ENST00000519436 SHROOM2Q13796 1616 aa36.74■■■■□ 3.47
ARFGEF1-206ENST00000519436 JPH4Q96JJ6 628 aa36.71■■■■□ 3.47
ARFGEF1-206ENST00000519436 TRHP20396 242 aaPredicted RBP36.66■■■■□ 3.46
ARFGEF1-206ENST00000519436 PRG4Q92954 1404 aaPredicted RBP36.62■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms